RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 TIGITQ495A1 244 aa3□□□□□ -1.93
LPP-220ENST00000617246 SYT14P1Q58G82 188 aa3□□□□□ -1.93
LPP-220ENST00000617246 ZNF782Q6ZMW2 699 aaPredicted RBP3□□□□□ -1.93
LPP-220ENST00000617246 CPNE8Q86YQ8 564 aa3□□□□□ -1.93
LPP-220ENST00000617246 LILRB1Q8NHL6 650 aaPredicted RBP3□□□□□ -1.93
LPP-220ENST00000617246 FCGR1BQ92637 280 aa3□□□□□ -1.93
LPP-220ENST00000617246 ABHD6Q9BV23 337 aa3□□□□□ -1.93
LPP-220ENST00000617246 BHMG1C9JSJ3 638 aaPredicted RBP3□□□□□ -1.93
LPP-220ENST00000617246 GPR137BO60478 399 aa3□□□□□ -1.93
LPP-220ENST00000617246 MAFKO60675 156 aa3□□□□□ -1.93
LPP-220ENST00000617246 GABRA6Q16445 453 aa3□□□□□ -1.93
LPP-220ENST00000617246 SPATS1Q496A3 300 aa3□□□□□ -1.93
LPP-220ENST00000617246 FAM199XQ6PEV8 388 aaPredicted RBP3□□□□□ -1.93
LPP-220ENST00000617246 PAQR4Q8N4S7 273 aaPredicted RBP3□□□□□ -1.93
LPP-220ENST00000617246 C16orf92Q96LL3 132 aa3□□□□□ -1.93
LPP-220ENST00000617246 GSTO2Q9H4Y5 243 aa3□□□□□ -1.93
LPP-220ENST00000617246 UNC13CQ8NB66 2214 aa3□□□□□ -1.93
LPP-220ENST00000617246 LOC101059948A0A1B0GTJ6 334 aa3□□□□□ -1.93
LPP-220ENST00000617246 PRRT4C9JH25 899 aa3□□□□□ -1.93
LPP-220ENST00000617246 ANKRD65E5RJM6 399 aa3□□□□□ -1.93
LPP-220ENST00000617246 H3BNX3 289 aa3□□□□□ -1.93
LPP-220ENST00000617246 OR7C1O76099 320 aaPredicted RBP3□□□□□ -1.93
LPP-220ENST00000617246 NPPAP01160 153 aa3□□□□□ -1.93
LPP-220ENST00000617246 GABRA5P31644 462 aa3□□□□□ -1.93
LPP-220ENST00000617246 ADARP55265 1226 aaKnown RBP3□□□□□ -1.93
LPP-220ENST00000617246 ZNF468Q5VIY5 522 aaPredicted RBP3□□□□□ -1.93
LPP-220ENST00000617246 DGAT2L7PQ6IED9 249 aa3□□□□□ -1.93
LPP-220ENST00000617246 SLCO4C1Q6ZQN7 724 aa3□□□□□ -1.93
LPP-220ENST00000617246 SCMH1Q96GD3 660 aa3□□□□□ -1.93
LPP-220ENST00000617246 PEX16Q9Y5Y5 336 aa3□□□□□ -1.93
LPP-220ENST00000617246 SERINC4A6NH21 518 aa3□□□□□ -1.93
LPP-220ENST00000617246 PTTG1O95997 202 aa3□□□□□ -1.93
LPP-220ENST00000617246 CD5P06127 495 aa3□□□□□ -1.93
LPP-220ENST00000617246 SLC2A2P11168 524 aaPredicted RBP3□□□□□ -1.93
LPP-220ENST00000617246 HNRNPH3P31942 346 aaKnown RBP3□□□□□ -1.93
LPP-220ENST00000617246 RFC3P40938 356 aa3□□□□□ -1.93
LPP-220ENST00000617246 FYTTD1Q96QD9 318 aaKnown RBP3□□□□□ -1.93
LPP-220ENST00000617246 PFDN5Q99471 154 aa3□□□□□ -1.93
LPP-220ENST00000617246 RNF167Q9H6Y7 350 aa3□□□□□ -1.93
LPP-220ENST00000617246 PARP11Q9NR21 331 aa3□□□□□ -1.93
LPP-220ENST00000617246 STYXL1Q9Y6J8 313 aa3□□□□□ -1.93
LPP-220ENST00000617246 CCDC182A6NF36 153 aa3□□□□□ -1.93
LPP-220ENST00000617246 NPIPB6E9PJ23 425 aa3□□□□□ -1.93
LPP-220ENST00000617246 C9P02748 559 aa3□□□□□ -1.93
LPP-220ENST00000617246 IMPDH1P20839 514 aa3□□□□□ -1.93
LPP-220ENST00000617246 RSBN1Q5VWQ0 802 aaPredicted RBP3□□□□□ -1.93
LPP-220ENST00000617246 TMEM81Q6P7N7 255 aa3□□□□□ -1.93
LPP-220ENST00000617246 H2BFWTQ7Z2G1 175 aa3□□□□□ -1.93
LPP-220ENST00000617246 STHQ8IWL8 128 aa3□□□□□ -1.93
LPP-220ENST00000617246 KIF2BQ8N4N8 673 aa3□□□□□ -1.93
LPP-220ENST00000617246 INO80EQ8NBZ0 244 aaPredicted RBP3□□□□□ -1.93
LPP-220ENST00000617246 THAP6Q8TBB0 222 aa3□□□□□ -1.93
LPP-220ENST00000617246 RANGRFQ9HD47 186 aaPredicted RBP3□□□□□ -1.93
LPP-220ENST00000617246 SIRT3Q9NTG7 399 aaPredicted RBP3□□□□□ -1.93
LPP-220ENST00000617246 MED29Q9NX70 200 aa3□□□□□ -1.93
LPP-220ENST00000617246 TAS2R8Q9NYW2 309 aa3□□□□□ -1.93
LPP-220ENST00000617246 C15orf41Q9Y2V0 281 aa3□□□□□ -1.93
LPP-220ENST00000617246 PRSS51A0A1B0GVH4 220 aa3□□□□□ -1.93
LPP-220ENST00000617246 A0A1W2PPV4 95 aa3□□□□□ -1.93
LPP-220ENST00000617246 TMEM30CPA0ZSE6 113 aa3□□□□□ -1.93
LPP-220ENST00000617246 NUPL2O15504 423 aaKnown RBP3□□□□□ -1.93
LPP-220ENST00000617246 TYROBPO43914 113 aa3□□□□□ -1.93
LPP-220ENST00000617246 CTXN2P0C2S0 81 aa3□□□□□ -1.93
LPP-220ENST00000617246 SPRED3Q2MJR0 410 aa3□□□□□ -1.93
LPP-220ENST00000617246 SCGB2B2Q4G0G5 96 aa3□□□□□ -1.93
LPP-220ENST00000617246 TMEM45BQ96B21 275 aa3□□□□□ -1.93
LPP-220ENST00000617246 RDH12Q96NR8 316 aa3□□□□□ -1.93
LPP-220ENST00000617246 NMNAT3Q96T66 252 aa3□□□□□ -1.93
LPP-220ENST00000617246 ZNF552Q9H707 407 aaPredicted RBP3□□□□□ -1.93
LPP-220ENST00000617246 YLPM1P49750 1951 aaKnown RBP3□□□□□ -1.93
LPP-220ENST00000617246 HDAC3O15379 428 aa3□□□□□ -1.93
LPP-220ENST00000617246 GUSBP08236 651 aa3□□□□□ -1.93
LPP-220ENST00000617246 FGF2P09038 288 aa3□□□□□ -1.93
LPP-220ENST00000617246 SCTRP47872 440 aa3□□□□□ -1.93
LPP-220ENST00000617246 COMPP49747 757 aaPredicted RBP3□□□□□ -1.93
LPP-220ENST00000617246 ACKR1Q16570 336 aa3□□□□□ -1.93
LPP-220ENST00000617246 DEFB113Q30KQ7 82 aa3□□□□□ -1.93
LPP-220ENST00000617246 TIMM23BQ5SRD1 257 aa3□□□□□ -1.93
LPP-220ENST00000617246 TRILQ7L0X0 811 aa3□□□□□ -1.93
LPP-220ENST00000617246 EEF1AKMT3Q96AZ1 226 aa3□□□□□ -1.93
LPP-220ENST00000617246 HINT3Q9NQE9 182 aaKnown RBP3□□□□□ -1.93
LPP-220ENST00000617246 A0A1B0GTI1 187 aa3□□□□□ -1.93
LPP-220ENST00000617246 FAM159BA6NKW6 160 aa3□□□□□ -1.93
LPP-220ENST00000617246 ANOS1P23352 680 aa3□□□□□ -1.93
LPP-220ENST00000617246 SOX3P41225 446 aa3□□□□□ -1.93
LPP-220ENST00000617246 S100A10P60903 97 aa3□□□□□ -1.93
LPP-220ENST00000617246 LRRC75A-AS1Q8N1F1 130 aa3□□□□□ -1.93
LPP-220ENST00000617246 FDCSPQ8NFU4 85 aa3□□□□□ -1.93
LPP-220ENST00000617246 MOB3AQ96BX8 217 aa3□□□□□ -1.93
LPP-220ENST00000617246 R3HDMLQ9H3Y0 253 aa3□□□□□ -1.93
LPP-220ENST00000617246 CTPS2Q9NRF8 586 aa3□□□□□ -1.93
LPP-220ENST00000617246 PDP1Q9P0J1 537 aaPredicted RBP3□□□□□ -1.93
LPP-220ENST00000617246 PLLPQ9Y342 182 aa3□□□□□ -1.93
LPP-220ENST00000617246 CCL27Q9Y4X3 112 aa3□□□□□ -1.93
LPP-220ENST00000617246 MRPS14O60783 128 aaKnown RBP3□□□□□ -1.93
LPP-220ENST00000617246 B4GALT1P15291 398 aa3□□□□□ -1.93
LPP-220ENST00000617246 THBS4P35443 961 aa3□□□□□ -1.93
LPP-220ENST00000617246 GATA4P43694 442 aa3□□□□□ -1.93
LPP-220ENST00000617246 OR2W3Q7Z3T1 314 aa3□□□□□ -1.93
LPP-220ENST00000617246 RTN4RL2Q86UN3 420 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms