RNA–Protein interactions for RNA: ENST00000617209.1

SRGAP2C-205, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5

Gene SRGAP2C, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-205ENST00000617209 IL19Q9UHD0 177 aa13.13□□□□□ -0.31
SRGAP2C-205ENST00000617209 IQCF6A8MYZ5 107 aa13.12□□□□□ -0.31
SRGAP2C-205ENST00000617209 ZNF878C9JN71 531 aa13.12□□□□□ -0.31
SRGAP2C-205ENST00000617209 PPIHO43447 177 aaKnown RBP13.12□□□□□ -0.31
SRGAP2C-205ENST00000617209 CDC14BO60729 498 aa13.12□□□□□ -0.31
SRGAP2C-205ENST00000617209 TNFRSF1AP19438 455 aa13.12□□□□□ -0.31
SRGAP2C-205ENST00000617209 SLC15A1P46059 708 aa13.12□□□□□ -0.31
SRGAP2C-205ENST00000617209 TNFAIP6P98066 277 aaPredicted RBP13.12□□□□□ -0.31
SRGAP2C-205ENST00000617209 EFNB1P98172 346 aa13.12□□□□□ -0.31
SRGAP2C-205ENST00000617209 SLC3A1Q07837 685 aa13.12□□□□□ -0.31
SRGAP2C-205ENST00000617209 GK2Q14410 553 aaPredicted RBP13.12□□□□□ -0.31
SRGAP2C-205ENST00000617209 DPY19L4Q7Z388 723 aa13.12□□□□□ -0.31
SRGAP2C-205ENST00000617209 AMIGO2Q86SJ2 522 aa13.12□□□□□ -0.31
SRGAP2C-205ENST00000617209 C10orf67Q8IYJ2 551 aa13.12□□□□□ -0.31
SRGAP2C-205ENST00000617209 OR13G1Q8NGZ3 307 aa13.12□□□□□ -0.31
SRGAP2C-205ENST00000617209 RNF133Q8WVZ7 376 aa13.12□□□□□ -0.31
SRGAP2C-205ENST00000617209 OTULINQ96BN8 352 aa13.12□□□□□ -0.31
SRGAP2C-205ENST00000617209 PLEKHA8Q96JA3 519 aa13.12□□□□□ -0.31
SRGAP2C-205ENST00000617209 SLC30A2Q9BRI3 323 aa13.12□□□□□ -0.31
SRGAP2C-205ENST00000617209 ABHD6Q9BV23 337 aa13.12□□□□□ -0.31
SRGAP2C-205ENST00000617209 OR51V1Q9H2C8 321 aa13.12□□□□□ -0.31
SRGAP2C-205ENST00000617209 TOR3AQ9H497 397 aa13.12□□□□□ -0.31
SRGAP2C-205ENST00000617209 KRT84Q9NSB2 600 aa13.12□□□□□ -0.31
SRGAP2C-205ENST00000617209 ENOPH1Q9UHY7 261 aa13.12□□□□□ -0.31
SRGAP2C-205ENST00000617209 LOC100289279A0A1B0GTE1 492 aa13.11□□□□□ -0.31
SRGAP2C-205ENST00000617209 APOC1P02654 83 aa13.11□□□□□ -0.31
SRGAP2C-205ENST00000617209 SLC2A5P22732 501 aa13.11□□□□□ -0.31
SRGAP2C-205ENST00000617209 LMO4P61968 165 aa13.11□□□□□ -0.31
SRGAP2C-205ENST00000617209 SNAPC1Q16533 368 aa13.11□□□□□ -0.31
SRGAP2C-205ENST00000617209 OR2T2Q6IF00 324 aa13.11□□□□□ -0.31
SRGAP2C-205ENST00000617209 FAM166AQ6J272 317 aa13.11□□□□□ -0.31
SRGAP2C-205ENST00000617209 ERI1Q8IV48 349 aaKnown RBP13.11□□□□□ -0.31
SRGAP2C-205ENST00000617209 ZNF454Q8N9F8 522 aa13.11□□□□□ -0.31
SRGAP2C-205ENST00000617209 OR2Z1Q8NG97 314 aa13.11□□□□□ -0.31
SRGAP2C-205ENST00000617209 CLDND2Q8NHS1 167 aa13.11□□□□□ -0.31
SRGAP2C-205ENST00000617209 OTOSQ8NHW6 89 aa13.11□□□□□ -0.31
SRGAP2C-205ENST00000617209 RAB1CQ92928 201 aa13.11□□□□□ -0.31
SRGAP2C-205ENST00000617209 COPS4Q9BT78 406 aa13.11□□□□□ -0.31
SRGAP2C-205ENST00000617209 SOX7Q9BT81 388 aa13.11□□□□□ -0.31
SRGAP2C-205ENST00000617209 REPIN1Q9BWE0 567 aaKnown RBP13.11□□□□□ -0.31
SRGAP2C-205ENST00000617209 PRRG3Q9BZD7 231 aa13.11□□□□□ -0.31
SRGAP2C-205ENST00000617209 CENPMQ9NSP4 180 aa13.11□□□□□ -0.31
SRGAP2C-205ENST00000617209 ZAR1LA6NP61 321 aa13.1□□□□□ -0.31
SRGAP2C-205ENST00000617209 CLDN25C9JDP6 229 aa13.1□□□□□ -0.31
SRGAP2C-205ENST00000617209 LMX1BO60663 402 aa13.1□□□□□ -0.31
SRGAP2C-205ENST00000617209 TGFAP01135 160 aa13.1□□□□□ -0.31
SRGAP2C-205ENST00000617209 IL2RGP31785 369 aa13.1□□□□□ -0.31
SRGAP2C-205ENST00000617209 CDH15P55291 814 aa13.1□□□□□ -0.31
SRGAP2C-205ENST00000617209 GRB2P62993 217 aaKnown RBP13.1□□□□□ -0.31
SRGAP2C-205ENST00000617209 EIF2B1Q14232 305 aaKnown RBP13.1□□□□□ -0.31
SRGAP2C-205ENST00000617209 TAF13Q15543 124 aa13.1□□□□□ -0.31
SRGAP2C-205ENST00000617209 SLX4IPQ5VYV7 408 aa13.1□□□□□ -0.31
SRGAP2C-205ENST00000617209 ZFP1Q6P2D0 407 aa13.1□□□□□ -0.31
SRGAP2C-205ENST00000617209 PGAP1Q75T13 922 aa13.1□□□□□ -0.31
SRGAP2C-205ENST00000617209 CXXC5Q7LFL8 322 aaKnown RBP13.1□□□□□ -0.31
SRGAP2C-205ENST00000617209 LINC01356Q8N9X3 169 aa13.1□□□□□ -0.31
SRGAP2C-205ENST00000617209 OR6N2Q8NGY6 317 aa13.1□□□□□ -0.31
SRGAP2C-205ENST00000617209 CCL17Q92583 94 aa13.1□□□□□ -0.31
SRGAP2C-205ENST00000617209 TIMD4Q96H15 378 aa13.1□□□□□ -0.31
SRGAP2C-205ENST00000617209 TEAD3Q99594 435 aa13.1□□□□□ -0.31
SRGAP2C-205ENST00000617209 SP140LQ9H930 580 aa13.1□□□□□ -0.31
SRGAP2C-205ENST00000617209 TVP23BQ9NYZ1 205 aa13.1□□□□□ -0.31
SRGAP2C-205ENST00000617209 TMEFF2Q9UIK5 374 aaPredicted RBP13.1□□□□□ -0.31
SRGAP2C-205ENST00000617209 CDC42EP3Q9UKI2 254 aa13.1□□□□□ -0.31
SRGAP2C-205ENST00000617209 CACNG2Q9Y698 323 aa13.1□□□□□ -0.31
SRGAP2C-205ENST00000617209 MXRA5Q9NR99 2828 aa13.1□□□□□ -0.31
SRGAP2C-205ENST00000617209 B4DSR2 109 aa13.09□□□□□ -0.31
SRGAP2C-205ENST00000617209 IFNL4K9M1U5 179 aa13.09□□□□□ -0.31
SRGAP2C-205ENST00000617209 WNT9BO14905 357 aa13.09□□□□□ -0.31
SRGAP2C-205ENST00000617209 ZNF16P17020 682 aaPredicted RBP13.09□□□□□ -0.31
SRGAP2C-205ENST00000617209 SLC6A9P48067 706 aa13.09□□□□□ -0.31
SRGAP2C-205ENST00000617209 PRKXP51817 358 aa13.09□□□□□ -0.31
SRGAP2C-205ENST00000617209 ZNF92Q03936 586 aa13.09□□□□□ -0.31
SRGAP2C-205ENST00000617209 SNAI3Q3KNW1 292 aa13.09□□□□□ -0.31
SRGAP2C-205ENST00000617209 KLHL12Q53G59 568 aa13.09□□□□□ -0.31
SRGAP2C-205ENST00000617209 SPRNQ5BIV9 151 aa13.09□□□□□ -0.31
SRGAP2C-205ENST00000617209 OR5AS1Q8N127 324 aa13.09□□□□□ -0.31
SRGAP2C-205ENST00000617209 SPSB4Q96A44 273 aa13.09□□□□□ -0.31
SRGAP2C-205ENST00000617209 ZMYND19Q96E35 227 aaPredicted RBP13.09□□□□□ -0.31
SRGAP2C-205ENST00000617209 SLC22A4Q9H015 551 aa13.09□□□□□ -0.31
SRGAP2C-205ENST00000617209 OPA3Q9H6K4 179 aa13.09□□□□□ -0.31
SRGAP2C-205ENST00000617209 TMEM100Q9NV29 134 aa13.09□□□□□ -0.31
SRGAP2C-205ENST00000617209 LPAR3Q9UBY5 353 aa13.09□□□□□ -0.31
SRGAP2C-205ENST00000617209 KCNS2Q9ULS6 477 aa13.09□□□□□ -0.31
SRGAP2C-205ENST00000617209 OAZ3Q9UMX2 235 aa13.09□□□□□ -0.31
SRGAP2C-205ENST00000617209 WIPI2Q9Y4P8 454 aa13.09□□□□□ -0.31
SRGAP2C-205ENST00000617209 MITFO75030 526 aaPredicted RBP13.08□□□□□ -0.32
SRGAP2C-205ENST00000617209 LYNP07948 512 aa13.08□□□□□ -0.32
SRGAP2C-205ENST00000617209 ALOX5APP20292 161 aa13.08□□□□□ -0.32
SRGAP2C-205ENST00000617209 EPHA2P29317 976 aa13.08□□□□□ -0.32
SRGAP2C-205ENST00000617209 OPRL1P41146 370 aa13.08□□□□□ -0.32
SRGAP2C-205ENST00000617209 APOFQ13790 326 aa13.08□□□□□ -0.32
SRGAP2C-205ENST00000617209 KPNB1Q14974 876 aaKnown RBP13.08□□□□□ -0.32
SRGAP2C-205ENST00000617209 CHRFAM7AQ494W8 412 aa13.08□□□□□ -0.32
SRGAP2C-205ENST00000617209 C12orf73Q69YU5 71 aa13.08□□□□□ -0.32
SRGAP2C-205ENST00000617209 SLC16A9Q7RTY1 509 aa13.08□□□□□ -0.32
SRGAP2C-205ENST00000617209 PRSS45Q7RTY3 260 aa13.08□□□□□ -0.32
SRGAP2C-205ENST00000617209 PEG10Q86TG7 708 aaKnown RBP13.08□□□□□ -0.32
SRGAP2C-205ENST00000617209 ZNF283Q8N7M2 679 aa13.08□□□□□ -0.32
SRGAP2C-205ENST00000617209 CELF2-AS1Q8N7Q2 184 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms