RNA–Protein interactions for RNA: ENST00000611481.1

LINC00540-201, long intergenic non-protein coding RNA 540, humanhuman

TSL 4

Gene LINC00540, Length 588 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00540-201ENST00000611481 MRPL37Q9BZE1 423 aaKnown RBP3.53□□□□□ -1.84
LINC00540-201ENST00000611481 MMP28Q9H239 520 aa3.53□□□□□ -1.84
LINC00540-201ENST00000611481 LRMDAQ9H2I8 198 aa3.53□□□□□ -1.84
LINC00540-201ENST00000611481 DYNLRB1Q9NP97 96 aa3.53□□□□□ -1.84
LINC00540-201ENST00000611481 LZTFL1Q9NQ48 299 aa3.53□□□□□ -1.84
LINC00540-201ENST00000611481 ZNF275Q9NSD4 429 aaPredicted RBP3.53□□□□□ -1.84
LINC00540-201ENST00000611481 SLC2A8Q9NY64 477 aa3.53□□□□□ -1.84
LINC00540-201ENST00000611481 KLHL9Q9P2J3 617 aa3.53□□□□□ -1.84
LINC00540-201ENST00000611481 SLC17A7Q9P2U7 560 aa3.53□□□□□ -1.84
LINC00540-201ENST00000611481 SEC14L4Q9UDX3 406 aa3.53□□□□□ -1.84
LINC00540-201ENST00000611481 ASIC3Q9UHC3 531 aa3.53□□□□□ -1.84
LINC00540-201ENST00000611481 MCTS1Q9ULC4 181 aaKnown RBP3.53□□□□□ -1.84
LINC00540-201ENST00000611481 SLC25A15Q9Y619 301 aa3.53□□□□□ -1.84
LINC00540-201ENST00000611481 AUP1Q9Y679 476 aa3.53□□□□□ -1.84
LINC00540-201ENST00000611481 DOCK11Q5JSL3 2073 aa3.52□□□□□ -1.85
LINC00540-201ENST00000611481 LOC100506127A0A0U1RQW1 187 aa3.52□□□□□ -1.85
LINC00540-201ENST00000611481 ZNF816-ZNF321PA0A0X1KG74 233 aa3.52□□□□□ -1.85
LINC00540-201ENST00000611481 METTL21EPA6NDL7 271 aa3.52□□□□□ -1.85
LINC00540-201ENST00000611481 TMCO5BA8MYB1 307 aa3.52□□□□□ -1.85
LINC00540-201ENST00000611481 E5RGE8 158 aa3.52□□□□□ -1.85
LINC00540-201ENST00000611481 hCG_2039718K7EN88 272 aa3.52□□□□□ -1.85
LINC00540-201ENST00000611481 AKR7A2O43488 359 aa3.52□□□□□ -1.85
LINC00540-201ENST00000611481 RNF13O43567 381 aa3.52□□□□□ -1.85
LINC00540-201ENST00000611481 ITM2AO43736 263 aa3.52□□□□□ -1.85
LINC00540-201ENST00000611481 ANGPTL7O43827 346 aa3.52□□□□□ -1.85
LINC00540-201ENST00000611481 CXCL13O43927 109 aa3.52□□□□□ -1.85
LINC00540-201ENST00000611481 SAP30O75446 220 aa3.52□□□□□ -1.85
LINC00540-201ENST00000611481 SCGNO76038 276 aa3.52□□□□□ -1.85
LINC00540-201ENST00000611481 ANP32DO95626 131 aa3.52□□□□□ -1.85
LINC00540-201ENST00000611481 CRYGCP07315 174 aa3.52□□□□□ -1.85
LINC00540-201ENST00000611481 SMIM10L1P0DMW3 83 aa3.52□□□□□ -1.85
LINC00540-201ENST00000611481 PRKACAP17612 351 aa3.52□□□□□ -1.85
LINC00540-201ENST00000611481 UQCRC2P22695 453 aa3.52□□□□□ -1.85
LINC00540-201ENST00000611481 IGHV1-2P23083 117 aa3.52□□□□□ -1.85
LINC00540-201ENST00000611481 ANOS1P23352 680 aa3.52□□□□□ -1.85
LINC00540-201ENST00000611481 CMA1P23946 247 aa3.52□□□□□ -1.85
LINC00540-201ENST00000611481 MSNP26038 577 aaKnown RBP3.52□□□□□ -1.85
LINC00540-201ENST00000611481 DUTP33316 252 aaKnown RBP3.52□□□□□ -1.85
LINC00540-201ENST00000611481 CLDN8P56748 225 aa3.52□□□□□ -1.85
LINC00540-201ENST00000611481 HERVK_113P63132 956 aa3.52□□□□□ -1.85
LINC00540-201ENST00000611481 ERVK-8P63133 956 aa3.52□□□□□ -1.85
LINC00540-201ENST00000611481 CX3CL1P78423 397 aa3.52□□□□□ -1.85
LINC00540-201ENST00000611481 SLC25A11Q02978 314 aaKnown RBP3.52□□□□□ -1.85
LINC00540-201ENST00000611481 SERTAD2Q14140 314 aa3.52□□□□□ -1.85
LINC00540-201ENST00000611481 DHX34Q14147 1143 aaKnown RBP3.52□□□□□ -1.85
LINC00540-201ENST00000611481 HEPACAMQ14CZ8 416 aa3.52□□□□□ -1.85
LINC00540-201ENST00000611481 EXOSC7Q15024 291 aaKnown RBP3.52□□□□□ -1.85
LINC00540-201ENST00000611481 P2RY14Q15391 338 aa3.52□□□□□ -1.85
LINC00540-201ENST00000611481 ODF4Q2M2E3 257 aa3.52□□□□□ -1.85
LINC00540-201ENST00000611481 Q3ZCU0 254 aa3.52□□□□□ -1.85
LINC00540-201ENST00000611481 TCTEX1D4Q5JR98 221 aa3.52□□□□□ -1.85
LINC00540-201ENST00000611481 CTSL3PQ5NE16 218 aa3.52□□□□□ -1.85
LINC00540-201ENST00000611481 AVPI1Q5T686 147 aa3.52□□□□□ -1.85
LINC00540-201ENST00000611481 LIPJQ5W064 366 aa3.52□□□□□ -1.85
LINC00540-201ENST00000611481 Q6ZT83 130 aa3.52□□□□□ -1.85
LINC00540-201ENST00000611481 GALNT10Q86SR1 603 aa3.52□□□□□ -1.85
LINC00540-201ENST00000611481 C17orf64Q86WR6 236 aa3.52□□□□□ -1.85
LINC00540-201ENST00000611481 KATNAL2Q8IYT4 538 aa3.52□□□□□ -1.85
LINC00540-201ENST00000611481 GBGT1Q8N5D6 347 aa3.52□□□□□ -1.85
LINC00540-201ENST00000611481 POC1AQ8NBT0 407 aa3.52□□□□□ -1.85
LINC00540-201ENST00000611481 OR4K17Q8NGC6 315 aa3.52□□□□□ -1.85
LINC00540-201ENST00000611481 OR52B6Q8NGF0 335 aa3.52□□□□□ -1.85
LINC00540-201ENST00000611481 OR10D3Q8NH80 312 aa3.52□□□□□ -1.85
LINC00540-201ENST00000611481 FAM81AQ8TBF8 368 aa3.52□□□□□ -1.85
LINC00540-201ENST00000611481 ABHD3Q8WU67 409 aa3.52□□□□□ -1.85
LINC00540-201ENST00000611481 TMEM37Q8WXS4 190 aa3.52□□□□□ -1.85
LINC00540-201ENST00000611481 P3H4Q92791 437 aa3.52□□□□□ -1.85
LINC00540-201ENST00000611481 ITFG2Q969R8 447 aa3.52□□□□□ -1.85
LINC00540-201ENST00000611481 SMIM10Q96HG1 83 aa3.52□□□□□ -1.85
LINC00540-201ENST00000611481 ADGRG7Q96K78 797 aa3.52□□□□□ -1.85
LINC00540-201ENST00000611481 CXorf58Q96LI9 332 aa3.52□□□□□ -1.85
LINC00540-201ENST00000611481 ERVK-6Q9BXR3 956 aa3.52□□□□□ -1.85
LINC00540-201ENST00000611481 DNTTIP1Q9H147 329 aa3.52□□□□□ -1.85
LINC00540-201ENST00000611481 TMEM185BQ9H7F4 350 aa3.52□□□□□ -1.85
LINC00540-201ENST00000611481 ELOVL3Q9HB03 270 aa3.52□□□□□ -1.85
LINC00540-201ENST00000611481 CA10Q9NS85 328 aa3.52□□□□□ -1.85
LINC00540-201ENST00000611481 NLE1Q9NVX2 485 aaPredicted RBP3.52□□□□□ -1.85
LINC00540-201ENST00000611481 PIPOXQ9P0Z9 390 aa3.52□□□□□ -1.85
LINC00540-201ENST00000611481 DAPK2Q9UIK4 370 aa3.52□□□□□ -1.85
LINC00540-201ENST00000611481 ANAPC7Q9UJX3 599 aa3.52□□□□□ -1.85
LINC00540-201ENST00000611481 PIGLQ9Y2B2 252 aa3.52□□□□□ -1.85
LINC00540-201ENST00000611481 SLC9A8Q9Y2E8 581 aa3.52□□□□□ -1.85
LINC00540-201ENST00000611481 NSG2Q9Y328 171 aa3.52□□□□□ -1.85
LINC00540-201ENST00000611481 MRPS18CQ9Y3D5 142 aaKnown RBP3.52□□□□□ -1.85
LINC00540-201ENST00000611481 PCNX3Q9H6A9 2034 aa3.51□□□□□ -1.85
LINC00540-201ENST00000611481 DNAH11Q96DT5 4516 aa3.51□□□□□ -1.85
LINC00540-201ENST00000611481 CIB4A0PJX0 185 aa3.51□□□□□ -1.85
LINC00540-201ENST00000611481 C17orf51A8MQB3 221 aa3.51□□□□□ -1.85
LINC00540-201ENST00000611481 B4DXG7 233 aa3.51□□□□□ -1.85
LINC00540-201ENST00000611481 SUPT3HB4E1H0 165 aa3.51□□□□□ -1.85
LINC00540-201ENST00000611481 H3BTX0 84 aa3.51□□□□□ -1.85
LINC00540-201ENST00000611481 FOXE1O00358 373 aaPredicted RBP3.51□□□□□ -1.85
LINC00540-201ENST00000611481 ZSCAN12O43309 604 aa3.51□□□□□ -1.85
LINC00540-201ENST00000611481 DFFBO76075 338 aa3.51□□□□□ -1.85
LINC00540-201ENST00000611481 CSTAP01040 98 aa3.51□□□□□ -1.85
LINC00540-201ENST00000611481 IGHV2-5P01817 119 aa3.51□□□□□ -1.85
LINC00540-201ENST00000611481 APOHP02749 345 aaPredicted RBP3.51□□□□□ -1.85
LINC00540-201ENST00000611481 OPN1LWP04000 364 aa3.51□□□□□ -1.85
LINC00540-201ENST00000611481 CATP04040 527 aaKnown RBP3.51□□□□□ -1.85
LINC00540-201ENST00000611481 IFNW1P05000 195 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms