RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 NSUN5P2Q63ZY6 315 aa14.28□□□□□ -0.12
RTN1-209ENST00000611068 OR51A7Q8NH64 312 aa14.28□□□□□ -0.12
RTN1-209ENST00000611068 SMPDL3BQ92485 455 aa14.28□□□□□ -0.12
RTN1-209ENST00000611068 HOXB13Q92826 284 aaPredicted RBP14.28□□□□□ -0.12
RTN1-209ENST00000611068 ADIPOR1Q96A54 375 aa14.28□□□□□ -0.12
RTN1-209ENST00000611068 TAAR9Q96RI9 348 aa14.28□□□□□ -0.12
RTN1-209ENST00000611068 G6PC3Q9BUM1 346 aa14.28□□□□□ -0.12
RTN1-209ENST00000611068 TMEM100Q9NV29 134 aa14.28□□□□□ -0.12
RTN1-209ENST00000611068 GGT3PA6NGU5 568 aa14.28□□□□□ -0.12
RTN1-209ENST00000611068 AGPAT2O15120 278 aa14.28□□□□□ -0.12
RTN1-209ENST00000611068 UTS2O95399 124 aa14.28□□□□□ -0.12
RTN1-209ENST00000611068 NGFRP08138 427 aa14.28□□□□□ -0.12
RTN1-209ENST00000611068 NDUFA6P56556 154 aa14.28□□□□□ -0.12
RTN1-209ENST00000611068 CLDN12P56749 244 aa14.28□□□□□ -0.12
RTN1-209ENST00000611068 PDZD11Q5EBL8 140 aa14.28□□□□□ -0.12
RTN1-209ENST00000611068 SPNS3Q6ZMD2 512 aa14.28□□□□□ -0.12
RTN1-209ENST00000611068 RABEPKQ7Z6M1 372 aa14.28□□□□□ -0.12
RTN1-209ENST00000611068 RGP1Q92546 391 aaPredicted RBP14.28□□□□□ -0.12
RTN1-209ENST00000611068 DAZLQ92904 295 aaKnown RBP14.28□□□□□ -0.12
RTN1-209ENST00000611068 SEC22AQ96IW7 307 aa14.28□□□□□ -0.12
RTN1-209ENST00000611068 C20orf24Q9BUV8 137 aa14.28□□□□□ -0.12
RTN1-209ENST00000611068 ULBP3Q9BZM4 244 aa14.28□□□□□ -0.12
RTN1-209ENST00000611068 SIRT7Q9NRC8 400 aa14.28□□□□□ -0.12
RTN1-209ENST00000611068 COPS7AQ9UBW8 275 aa14.28□□□□□ -0.12
RTN1-209ENST00000611068 CACFD1Q9UGQ2 172 aa14.28□□□□□ -0.12
RTN1-209ENST00000611068 SLC35A3Q9Y2D2 325 aa14.28□□□□□ -0.12
RTN1-209ENST00000611068 TRAV27A0A087WT01 109 aa14.28□□□□□ -0.12
RTN1-209ENST00000611068 RNASEK-C17orf49H0YIS7 233 aa14.28□□□□□ -0.12
RTN1-209ENST00000611068 ZNF354AO60765 605 aaPredicted RBP14.28□□□□□ -0.12
RTN1-209ENST00000611068 ALOX12BO75342 701 aa14.28□□□□□ -0.12
RTN1-209ENST00000611068 WISP1O95388 367 aa14.28□□□□□ -0.12
RTN1-209ENST00000611068 NME2P22392 152 aa14.28□□□□□ -0.12
RTN1-209ENST00000611068 BDH1Q02338 343 aa14.28□□□□□ -0.12
RTN1-209ENST00000611068 SQSTM1Q13501 440 aa14.28□□□□□ -0.12
RTN1-209ENST00000611068 KIAA0141Q14154 515 aaPredicted RBP14.28□□□□□ -0.12
RTN1-209ENST00000611068 EBPQ15125 230 aaKnown RBP14.28□□□□□ -0.12
RTN1-209ENST00000611068 ALG10BQ5I7T1 473 aa14.28□□□□□ -0.12
RTN1-209ENST00000611068 C11orf87Q6NUJ2 197 aa14.28□□□□□ -0.12
RTN1-209ENST00000611068 KIRREL2Q6UWL6 708 aa14.28□□□□□ -0.12
RTN1-209ENST00000611068 DHRS11Q6UWP2 260 aa14.28□□□□□ -0.12
RTN1-209ENST00000611068 MRGPREQ86SM8 312 aa14.28□□□□□ -0.12
RTN1-209ENST00000611068 MARCH3Q86UD3 253 aa14.28□□□□□ -0.12
RTN1-209ENST00000611068 PRSS35Q8N3Z0 413 aa14.28□□□□□ -0.12
RTN1-209ENST00000611068 TMEM239Q8WW34 195 aa14.28□□□□□ -0.12
RTN1-209ENST00000611068 RFKQ969G6 155 aa14.28□□□□□ -0.12
RTN1-209ENST00000611068 AKR1E2Q96JD6 320 aa14.28□□□□□ -0.12
RTN1-209ENST00000611068 SAMD8Q96LT4 415 aa14.28□□□□□ -0.12
RTN1-209ENST00000611068 SLC46A1Q96NT5 459 aa14.28□□□□□ -0.12
RTN1-209ENST00000611068 TRIM36Q9NQ86 728 aa14.28□□□□□ -0.12
RTN1-209ENST00000611068 SERINC4A6NH21 518 aa14.27□□□□□ -0.13
RTN1-209ENST00000611068 CCSO14618 274 aa14.27□□□□□ -0.13
RTN1-209ENST00000611068 PPP1R3DO95685 299 aa14.27□□□□□ -0.13
RTN1-209ENST00000611068 CRABP1P29762 137 aa14.27□□□□□ -0.13
RTN1-209ENST00000611068 GRK6P43250 576 aa14.27□□□□□ -0.13
RTN1-209ENST00000611068 PPICP45877 212 aa14.27□□□□□ -0.13
RTN1-209ENST00000611068 DUSP3P51452 185 aaPredicted RBP14.27□□□□□ -0.13
RTN1-209ENST00000611068 EMP2P54851 167 aa14.27□□□□□ -0.13
RTN1-209ENST00000611068 NHLH2Q02577 135 aa14.27□□□□□ -0.13
RTN1-209ENST00000611068 FOXO1Q12778 655 aa14.27□□□□□ -0.13
RTN1-209ENST00000611068 MBOAT2Q6ZWT7 520 aa14.27□□□□□ -0.13
RTN1-209ENST00000611068 ANKRD37Q7Z713 158 aa14.27□□□□□ -0.13
RTN1-209ENST00000611068 LRRC18Q8N456 261 aa14.27□□□□□ -0.13
RTN1-209ENST00000611068 OR5AP2Q8NGF4 316 aa14.27□□□□□ -0.13
RTN1-209ENST00000611068 OR13C2Q8NGS9 318 aa14.27□□□□□ -0.13
RTN1-209ENST00000611068 GPR148Q8TDV2 347 aa14.27□□□□□ -0.13
RTN1-209ENST00000611068 PGLYRP3Q96LB9 341 aa14.27□□□□□ -0.13
RTN1-209ENST00000611068 J3QRE1 110 aa14.27□□□□□ -0.13
RTN1-209ENST00000611068 NTN3O00634 580 aaPredicted RBP14.27□□□□□ -0.13
RTN1-209ENST00000611068 FLRT2O43155 660 aa14.27□□□□□ -0.13
RTN1-209ENST00000611068 CD74P04233 296 aa14.27□□□□□ -0.13
RTN1-209ENST00000611068 MRPS10P82664 201 aaKnown RBP14.27□□□□□ -0.13
RTN1-209ENST00000611068 SPEM2Q0P670 501 aa14.27□□□□□ -0.13
RTN1-209ENST00000611068 COTL1Q14019 142 aa14.27□□□□□ -0.13
RTN1-209ENST00000611068 AWAT1Q58HT5 328 aa14.27□□□□□ -0.13
RTN1-209ENST00000611068 SLC35D3Q5M8T2 416 aa14.27□□□□□ -0.13
RTN1-209ENST00000611068 LIPNQ5VXI9 398 aa14.27□□□□□ -0.13
RTN1-209ENST00000611068 FCRLAQ7L513 359 aa14.27□□□□□ -0.13
RTN1-209ENST00000611068 ACBD7Q8N6N7 88 aa14.27□□□□□ -0.13
RTN1-209ENST00000611068 AGBL5Q8NDL9 886 aa14.27□□□□□ -0.13
RTN1-209ENST00000611068 OR4C16Q8NGL9 310 aa14.27□□□□□ -0.13
RTN1-209ENST00000611068 OR1N1Q8NGS0 311 aa14.27□□□□□ -0.13
RTN1-209ENST00000611068 METTL21AQ8WXB1 218 aa14.27□□□□□ -0.13
RTN1-209ENST00000611068 MR1Q95460 341 aa14.27□□□□□ -0.13
RTN1-209ENST00000611068 WWTR1Q9GZV5 400 aa14.27□□□□□ -0.13
RTN1-209ENST00000611068 MED20Q9H944 212 aa14.27□□□□□ -0.13
RTN1-209ENST00000611068 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.27□□□□□ -0.13
RTN1-209ENST00000611068 ZMIZ1Q9ULJ6 1067 aa14.27□□□□□ -0.13
RTN1-209ENST00000611068 C7orf77A4D0Y5 90 aa14.26□□□□□ -0.13
RTN1-209ENST00000611068 LYPD3O95274 346 aa14.26□□□□□ -0.13
RTN1-209ENST00000611068 ZNF25P17030 456 aaPredicted RBP14.26□□□□□ -0.13
RTN1-209ENST00000611068 IL12BP29460 328 aa14.26□□□□□ -0.13
RTN1-209ENST00000611068 HTR1FP30939 366 aa14.26□□□□□ -0.13
RTN1-209ENST00000611068 GSK3AP49840 483 aa14.26□□□□□ -0.13
RTN1-209ENST00000611068 ATP1B3P54709 279 aa14.26□□□□□ -0.13
RTN1-209ENST00000611068 PLCXD2Q0VAA5 305 aa14.26□□□□□ -0.13
RTN1-209ENST00000611068 MEF2DQ14814 521 aa14.26□□□□□ -0.13
RTN1-209ENST00000611068 AARDQ4LEZ3 155 aa14.26□□□□□ -0.13
RTN1-209ENST00000611068 ACTBL2Q562R1 376 aa14.26□□□□□ -0.13
RTN1-209ENST00000611068 GFI1BQ5VTD9 330 aa14.26□□□□□ -0.13
RTN1-209ENST00000611068 ACOT7LQ6ZUV0 252 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms