RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 SOHLH1Q5JUK2 328 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 IDNKQ5T6J7 187 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 FKBP1CQ5VVH2 108 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 EIF5AL1Q6IS14 154 aaKnown RBP4.23□□□□□ -1.73
LINC01109-201ENST00000603837 ZNF549Q6P9A3 640 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 DPY19L2P2Q6ZN68 376 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 ASCL5Q7RTU5 278 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 GRINAQ7Z429 371 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 CPEB2Q7Z5Q1 589 aaKnown RBP4.23□□□□□ -1.73
LINC01109-201ENST00000603837 WDR53Q7Z5U6 358 aaPredicted RBP4.23□□□□□ -1.73
LINC01109-201ENST00000603837 SERPINA11Q86U17 422 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 MARCH9Q86YJ5 346 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 CMTM8Q8IZV2 173 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 FGFRL1Q8N441 504 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 KCNRGQ8N5I3 272 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 OR11G2Q8NGC1 345 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 SLC2A12Q8TD20 617 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 TOMM40LQ969M1 308 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 SMARCD1Q96GM5 515 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 OR8B4Q96RC9 309 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 TNFRSF13CQ96RJ3 184 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 NKX3-1Q99801 234 aaPredicted RBP4.23□□□□□ -1.73
LINC01109-201ENST00000603837 RAB6CQ9H0N0 254 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 WDR13Q9H1Z4 485 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 PLEK2Q9NYT0 353 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 CACFD1Q9UGQ2 172 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 TMED3Q9Y3Q3 217 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 RNF115Q9Y4L5 304 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 TIMM10BQ9Y5J6 103 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 COLEC10Q9Y6Z7 277 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 ZCWPW2A0A1B0GU75 182 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 A0A1B0GUS0 222 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 ANKRD20A5PA0PJZ0 165 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 TMEM235A6NFC5 223 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 GGT3PA6NGU5 568 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 SNRPGP15A8MWD9 76 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 FAM220BPB1ANY3 271 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 E7EQ34 232 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 MFNGO00587 321 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 GOSR2O14653 212 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 MPZL2O60487 215 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 LRP3O75074 770 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 LSM8O95777 96 aaKnown RBP4.23□□□□□ -1.73
LINC01109-201ENST00000603837 SOD1P00441 154 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 ETFAP13804 333 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 KCNE1P15382 129 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 CHRNB4P30926 498 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 CLDN12P56749 244 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 BACE1P56817 501 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 DGCR2P98153 550 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 EIF4EBP2Q13542 120 aaPredicted RBP4.23□□□□□ -1.73
LINC01109-201ENST00000603837 HMGN3Q15651 99 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 ITPRIPL2Q3MIP1 535 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 ZNF678Q5SXM1 525 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 COL5A1-AS1Q5SY13 56 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 SYPL2Q5VXT5 272 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 GLT8D1Q68CQ7 371 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 SLC8B1Q6J4K2 584 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 BTNL3Q6UXE8 466 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 HEPN1Q6WQI6 88 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 MFSD6LQ8IWD5 586 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 LRRC56Q8IYG6 542 aaPredicted RBP4.23□□□□□ -1.73
LINC01109-201ENST00000603837 DOCK3Q8IZD9 2030 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 LYG1Q8N1E2 194 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 SAMD12Q8N8I0 201 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 OR10R2Q8NGX6 335 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 SAP25Q8TEE9 199 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 HSPA12BQ96MM6 686 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 IP6K3Q96PC2 410 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 TP53RKQ96S44 253 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 HIST1H2BLQ99880 126 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 SLC35A5Q9BS91 424 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 LMF2Q9BU23 707 aaKnown RBP4.23□□□□□ -1.73
LINC01109-201ENST00000603837 SLC46A2Q9BY10 475 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 SLC25A31Q9H0C2 315 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 NKX2-4Q9H2Z4 354 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 TUBB1Q9H4B7 451 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 ZDHHC6Q9H6R6 413 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 ELOVL3Q9HB03 270 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 HEBP1Q9NRV9 189 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 SLC6A13Q9NSD5 602 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 BEX4Q9NWD9 120 aaPredicted RBP4.23□□□□□ -1.73
LINC01109-201ENST00000603837 RBPJLQ9UBG7 517 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 ZNF230Q9UIE0 474 aaPredicted RBP4.23□□□□□ -1.73
LINC01109-201ENST00000603837 PADI3Q9ULW8 664 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 MYO18AQ92614 2054 aaKnown RBP4.23□□□□□ -1.73
LINC01109-201ENST00000603837 SCO2A0A1W2PP80 73 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 HIST1H2BKO60814 126 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 RAMP3O60896 148 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 SCGNO76038 276 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 ABHD16AO95870 558 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 HIST1H2BJP06899 126 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 CST2P09228 141 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 CD79AP11912 226 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 ST6GAL1P15907 406 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 HIST1H2BOP23527 126 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 DPP4P27487 766 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 HIST1H2BBP33778 126 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 SULT1A1P50225 295 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 EFNA3P52797 238 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms