RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 ZNF205O95201 554 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 EFEMP2O95967 443 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 PRKCGP05129 697 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 IL6RP08887 468 aaPredicted RBP4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 GKN3PP0CG01 181 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 PPIAL4FP0DN26 164 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 SNHG28P0DPA3 235 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 SCGB1A1P11684 91 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 UNGP13051 313 aaPredicted RBP4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 CXCL3P19876 107 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 NFYAP23511 347 aaPredicted RBP4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 CD1CP29017 333 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 GRPRP30550 384 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 TIMP3P35625 211 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 PIGAP37287 484 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 GLP1RP43220 463 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 IER3P46695 156 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 TAS2R41P59536 307 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 RPS15AP62244 130 aaKnown RBP4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 ZNF616Q08AN1 781 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 MESP2Q0VG99 397 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 ZP4Q12836 540 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 BSXQ3C1V8 233 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 TMEM255AQ5JRV8 349 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 PRSS36Q5K4E3 855 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 TREML2Q5T2D2 321 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 OTUD3Q5T2D3 398 aaPredicted RBP4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 AKR1C8PQ5T2L2 129 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 LYPLAL1Q5VWZ2 237 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 RGMBQ6NW40 437 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 SLC25A47Q6Q0C1 308 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 GSG1LQ6UXU4 331 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 SPPL2CQ8IUH8 684 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 FBXO16Q8IX29 292 aaPredicted RBP4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 BCL6BQ8N143 479 aaPredicted RBP4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 OR13C8Q8NGS7 320 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 OR10A6Q8NH74 314 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 OVCA2Q8WZ82 227 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 ADGRG7Q96K78 797 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 SLC35A5Q9BS91 424 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 TEX101Q9BY14 249 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 CDCP1Q9H5V8 836 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 FAM124BQ9H5Z6 455 aaPredicted RBP4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 SAP30LQ9HAJ7 183 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 TPT1P8Q9HAU6 139 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 PLAC1Q9HBJ0 212 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 MSL2Q9HCI7 577 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 EXOSC3Q9NQT5 275 aaKnown RBP4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 FOXJ2Q9P0K8 574 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 RAP2CQ9Y3L5 183 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 TMED3Q9Y3Q3 217 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 PPIAL4AQ9Y536 164 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 V9GYS6 101 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 COL11A1P12107 1806 aaPredicted RBP4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 SCN9AQ15858 1988 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 ZNF726A6NNF4 738 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 HMSDA8MTL9 139 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 B4DGG1 531 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 MCRIP1C9JLW8 97 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 UPK1AO00322 258 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 FZD7O75084 574 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 LDB3O75112 727 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 CD74P04233 296 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 BCHEP06276 602 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 HOXC6P09630 235 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 TAL1P17542 331 aaPredicted RBP4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 RAB5AP20339 215 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 RPS12P25398 132 aaKnown RBP4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 ITPKBP27987 946 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 HMGCS2P54868 508 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 RPS20P60866 119 aaKnown RBP4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 CDC42P60953 191 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 CRHR2Q13324 411 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 CYP51A1Q16850 503 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 QRICH1Q2TAL8 776 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 TMEM52BQ4KMG9 183 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 C1orf220Q5T0J3 134 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 BCL2L15Q5TBC7 163 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 FAM166AQ6J272 317 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 ALKAL1Q6UXT8 129 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 GDPGP1Q6ZNW5 385 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 ATG4DQ86TL0 474 aaPredicted RBP4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 ZNF761Q86XN6 746 aaPredicted RBP4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 SPACA3Q8IXA5 215 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 SLC34A3Q8N130 599 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 OR6V1Q8N148 313 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 ZNF664Q8N3J9 261 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 OR5L2Q8NGL0 311 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 OR2AE1Q8NHA4 323 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 CNIH3Q8TBE1 160 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 TAAR8Q969N4 342 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 ISOC2Q96AB3 205 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 EPYCQ99645 322 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 AIF1LQ9BQI0 150 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 ADAT1Q9BUB4 502 aaKnown RBP4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 FAM234AQ9H0X4 552 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 OR51E2Q9H255 320 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 C1orf123Q9NWV4 160 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms