RNA–Protein interactions for RNA: ENST00000600499.5

LTBP4-228, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-228ENST00000600499 ATP5J2P56134 94 aa12.49□□□□□ -0.41
LTBP4-228ENST00000600499 ISL1P61371 349 aa12.49□□□□□ -0.41
LTBP4-228ENST00000600499 EGR3Q06889 387 aa12.49□□□□□ -0.41
LTBP4-228ENST00000600499 MAD2L1BPQ15013 274 aaPredicted RBP12.49□□□□□ -0.41
LTBP4-228ENST00000600499 ZNF684Q5T5D7 378 aa12.49□□□□□ -0.41
LTBP4-228ENST00000600499 EGFL6Q8IUX8 553 aa12.49□□□□□ -0.41
LTBP4-228ENST00000600499 SLC35F2Q8IXU6 374 aa12.49□□□□□ -0.41
LTBP4-228ENST00000600499 ZNF679Q8IYX0 411 aa12.49□□□□□ -0.41
LTBP4-228ENST00000600499 OR51G2Q8NGK0 314 aa12.49□□□□□ -0.41
LTBP4-228ENST00000600499 FBLIM1Q8WUP2 373 aa12.49□□□□□ -0.41
LTBP4-228ENST00000600499 THEM6Q8WUY1 208 aa12.49□□□□□ -0.41
LTBP4-228ENST00000600499 TFAP2CQ92754 450 aa12.49□□□□□ -0.41
LTBP4-228ENST00000600499 SPSB4Q96A44 273 aa12.49□□□□□ -0.41
LTBP4-228ENST00000600499 OR8B4Q96RC9 309 aa12.49□□□□□ -0.41
LTBP4-228ENST00000600499 SP140LQ9H930 580 aa12.49□□□□□ -0.41
LTBP4-228ENST00000600499 NKIRAS2Q9NYR9 191 aa12.49□□□□□ -0.41
LTBP4-228ENST00000600499 TAAR3PQ9P1P4 343 aa12.49□□□□□ -0.41
LTBP4-228ENST00000600499 DUSP13Q9UII6 198 aa12.49□□□□□ -0.41
LTBP4-228ENST00000600499 FZR1Q9UM11 496 aa12.49□□□□□ -0.41
LTBP4-228ENST00000600499 PRR32B1ATL7 298 aa12.48□□□□□ -0.41
LTBP4-228ENST00000600499 RRP9O43818 475 aaKnown RBP12.48□□□□□ -0.41
LTBP4-228ENST00000600499 NDUFS7O75251 213 aa12.48□□□□□ -0.41
LTBP4-228ENST00000600499 ATP6V1G2O95670 118 aa12.48□□□□□ -0.41
LTBP4-228ENST00000600499 LCATP04180 440 aa12.48□□□□□ -0.41
LTBP4-228ENST00000600499 MRPL3P09001 348 aaKnown RBP12.48□□□□□ -0.41
LTBP4-228ENST00000600499 H2BFMP0C1H6 154 aa12.48□□□□□ -0.41
LTBP4-228ENST00000600499 ANOS1P23352 680 aa12.48□□□□□ -0.41
LTBP4-228ENST00000600499 TAF13Q15543 124 aa12.48□□□□□ -0.41
LTBP4-228ENST00000600499 SPATA46Q5T0L3 261 aa12.48□□□□□ -0.41
LTBP4-228ENST00000600499 SETD9Q8NE22 299 aa12.48□□□□□ -0.41
LTBP4-228ENST00000600499 OR52H1Q8NGJ2 320 aa12.48□□□□□ -0.41
LTBP4-228ENST00000600499 NEU4Q8WWR8 484 aaPredicted RBP12.48□□□□□ -0.41
LTBP4-228ENST00000600499 ITFG2Q969R8 447 aa12.48□□□□□ -0.41
LTBP4-228ENST00000600499 CMBLQ96DG6 245 aa12.48□□□□□ -0.41
LTBP4-228ENST00000600499 PERPQ96FX8 193 aa12.48□□□□□ -0.41
LTBP4-228ENST00000600499 SORCS2Q96PQ0 1159 aa12.48□□□□□ -0.41
LTBP4-228ENST00000600499 REPIN1Q9BWE0 567 aaKnown RBP12.48□□□□□ -0.41
LTBP4-228ENST00000600499 RAB1BQ9H0U4 201 aa12.48□□□□□ -0.41
LTBP4-228ENST00000600499 CYSLTR2Q9NS75 346 aa12.48□□□□□ -0.41
LTBP4-228ENST00000600499 PURGQ9UJV8 347 aaKnown RBP12.48□□□□□ -0.41
LTBP4-228ENST00000600499 LRP12Q9Y561 859 aa12.48□□□□□ -0.41
LTBP4-228ENST00000600499 CHD3Q12873 2000 aaKnown RBP12.48□□□□□ -0.41
LTBP4-228ENST00000600499 C17orf100A8MU93 164 aa12.47□□□□□ -0.41
LTBP4-228ENST00000600499 IQCF6A8MYZ5 107 aa12.47□□□□□ -0.41
LTBP4-228ENST00000600499 ZNF670-ZNF695F2Z2N8 137 aa12.47□□□□□ -0.41
LTBP4-228ENST00000600499 SRSF10O75494 262 aaKnown RBP12.47□□□□□ -0.41
LTBP4-228ENST00000600499 ADRA2AP08913 450 aa12.47□□□□□ -0.41
LTBP4-228ENST00000600499 HSD11B1P28845 292 aa12.47□□□□□ -0.41
LTBP4-228ENST00000600499 CX3CR1P49238 355 aa12.47□□□□□ -0.41
LTBP4-228ENST00000600499 MMP16P51512 607 aa12.47□□□□□ -0.41
LTBP4-228ENST00000600499 PRKXP51817 358 aa12.47□□□□□ -0.41
LTBP4-228ENST00000600499 PSMA6P60900 246 aaKnown RBP12.47□□□□□ -0.41
LTBP4-228ENST00000600499 CXCR4P61073 352 aa12.47□□□□□ -0.41
LTBP4-228ENST00000600499 GK2Q14410 553 aaPredicted RBP12.47□□□□□ -0.41
LTBP4-228ENST00000600499 SNAI3Q3KNW1 292 aa12.47□□□□□ -0.41
LTBP4-228ENST00000600499 ZNF322Q6U7Q0 402 aaPredicted RBP12.47□□□□□ -0.41
LTBP4-228ENST00000600499 LRRN1Q6UXK5 716 aa12.47□□□□□ -0.41
LTBP4-228ENST00000600499 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.47□□□□□ -0.41
LTBP4-228ENST00000600499 ZNF283Q8N7M2 679 aa12.47□□□□□ -0.41
LTBP4-228ENST00000600499 CYGBQ8WWM9 190 aa12.47□□□□□ -0.41
LTBP4-228ENST00000600499 MROQ9BYG7 248 aa12.47□□□□□ -0.41
LTBP4-228ENST00000600499 OPA3Q9H6K4 179 aa12.47□□□□□ -0.41
LTBP4-228ENST00000600499 AASSQ9UDR5 926 aa12.47□□□□□ -0.41
LTBP4-228ENST00000600499 PCDHGB1Q9Y5G3 927 aa12.47□□□□□ -0.41
LTBP4-228ENST00000600499 A0A1W2PQL4 384 aaPredicted RBP12.46□□□□□ -0.41
LTBP4-228ENST00000600499 XRCC2O43543 280 aa12.46□□□□□ -0.41
LTBP4-228ENST00000600499 SULT1C4O75897 302 aa12.46□□□□□ -0.41
LTBP4-228ENST00000600499 CLIC3O95833 236 aa12.46□□□□□ -0.41
LTBP4-228ENST00000600499 DBTP11182 482 aaKnown RBP12.46□□□□□ -0.41
LTBP4-228ENST00000600499 SELEP16581 610 aa12.46□□□□□ -0.41
LTBP4-228ENST00000600499 ALDH3B1P43353 468 aa12.46□□□□□ -0.41
LTBP4-228ENST00000600499 SLC6A9P48067 706 aa12.46□□□□□ -0.41
LTBP4-228ENST00000600499 ZNF121P58317 390 aaPredicted RBP12.46□□□□□ -0.41
LTBP4-228ENST00000600499 ZNF91Q05481 1191 aa12.46□□□□□ -0.41
LTBP4-228ENST00000600499 RAB40BQ12829 278 aa12.46□□□□□ -0.41
LTBP4-228ENST00000600499 MALLQ13021 153 aa12.46□□□□□ -0.41
LTBP4-228ENST00000600499 CDK5R2Q13319 367 aa12.46□□□□□ -0.41
LTBP4-228ENST00000600499 PCGF3Q3KNV8 242 aa12.46□□□□□ -0.41
LTBP4-228ENST00000600499 ALKBH6Q3KRA9 238 aa12.46□□□□□ -0.41
LTBP4-228ENST00000600499 Q5PR19 223 aa12.46□□□□□ -0.41
LTBP4-228ENST00000600499 SPATC1Q76KD6 591 aa12.46□□□□□ -0.41
LTBP4-228ENST00000600499 KRT74Q7RTS7 529 aa12.46□□□□□ -0.41
LTBP4-228ENST00000600499 KRT77Q7Z794 578 aa12.46□□□□□ -0.41
LTBP4-228ENST00000600499 RFLNBQ8N5W9 214 aa12.46□□□□□ -0.41
LTBP4-228ENST00000600499 LGALS12Q96DT0 336 aa12.46□□□□□ -0.41
LTBP4-228ENST00000600499 RNFT2Q96EX2 444 aa12.46□□□□□ -0.41
LTBP4-228ENST00000600499 JAM3Q9BX67 310 aa12.46□□□□□ -0.41
LTBP4-228ENST00000600499 VCX3BQ9H321 246 aa12.46□□□□□ -0.41
LTBP4-228ENST00000600499 RGCCQ9H4X1 137 aa12.46□□□□□ -0.41
LTBP4-228ENST00000600499 DYNLRB1Q9NP97 96 aa12.46□□□□□ -0.41
LTBP4-228ENST00000600499 MYOZ1Q9NP98 299 aaPredicted RBP12.46□□□□□ -0.41
LTBP4-228ENST00000600499 PTTG3PQ9NZH4 202 aa12.46□□□□□ -0.41
LTBP4-228ENST00000600499 MRM2Q9UI43 246 aaKnown RBP12.46□□□□□ -0.41
LTBP4-228ENST00000600499 ZNF391Q9UJN7 358 aa12.46□□□□□ -0.41
LTBP4-228ENST00000600499 ITGB1BP2Q9UKP3 347 aa12.46□□□□□ -0.41
LTBP4-228ENST00000600499 RRP15Q9Y3B9 282 aaKnown RBP12.46□□□□□ -0.41
LTBP4-228ENST00000600499 RPL36Q9Y3U8 105 aaKnown RBP12.46□□□□□ -0.41
LTBP4-228ENST00000600499 A0A1W2PPW3 197 aa12.45□□□□□ -0.42
LTBP4-228ENST00000600499 C5orf63A6NC05 138 aa12.45□□□□□ -0.42
LTBP4-228ENST00000600499 IGLV3-1P01715 115 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms