RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 OR2T2Q6IF00 324 aa12.01□□□□□ -0.49
LIG1-218ENST00000599322 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.01□□□□□ -0.49
LIG1-218ENST00000599322 ZNF283Q8N7M2 679 aa12.01□□□□□ -0.49
LIG1-218ENST00000599322 ST7LQ8TDW4 575 aa12.01□□□□□ -0.49
LIG1-218ENST00000599322 GTF3AQ92664 365 aaKnown RBP12.01□□□□□ -0.49
LIG1-218ENST00000599322 SLAMF6Q96DU3 332 aa12.01□□□□□ -0.49
LIG1-218ENST00000599322 INTS14Q96SY0 518 aa12.01□□□□□ -0.49
LIG1-218ENST00000599322 DDOQ99489 341 aa12.01□□□□□ -0.49
LIG1-218ENST00000599322 SLC22A4Q9H015 551 aa12.01□□□□□ -0.49
LIG1-218ENST00000599322 OR51V1Q9H2C8 321 aa12.01□□□□□ -0.49
LIG1-218ENST00000599322 TOR3AQ9H497 397 aa12.01□□□□□ -0.49
LIG1-218ENST00000599322 ENOPH1Q9UHY7 261 aa12.01□□□□□ -0.49
LIG1-218ENST00000599322 PPP1R3CQ9UQK1 317 aa12.01□□□□□ -0.49
LIG1-218ENST00000599322 WIPI2Q9Y4P8 454 aa12.01□□□□□ -0.49
LIG1-218ENST00000599322 COMMD3-BMI1R4GMX3 469 aa12.01□□□□□ -0.49
LIG1-218ENST00000599322 MXRA5Q9NR99 2828 aa12.01□□□□□ -0.49
LIG1-218ENST00000599322 GGT3PA6NGU5 568 aa12□□□□□ -0.49
LIG1-218ENST00000599322 ZNF878C9JN71 531 aa12□□□□□ -0.49
LIG1-218ENST00000599322 GLCEO94923 617 aa12□□□□□ -0.49
LIG1-218ENST00000599322 MSMBP08118 114 aa12□□□□□ -0.49
LIG1-218ENST00000599322 IRF2P14316 349 aa12□□□□□ -0.49
LIG1-218ENST00000599322 ERFP50548 548 aa12□□□□□ -0.49
LIG1-218ENST00000599322 RPS7P62081 194 aaKnown RBP12□□□□□ -0.49
LIG1-218ENST00000599322 GRB2P62993 217 aaKnown RBP12□□□□□ -0.49
LIG1-218ENST00000599322 MZT1Q08AG7 82 aa12□□□□□ -0.49
LIG1-218ENST00000599322 EIF2B1Q14232 305 aaKnown RBP12□□□□□ -0.49
LIG1-218ENST00000599322 HLXQ14774 488 aaPredicted RBP12□□□□□ -0.49
LIG1-218ENST00000599322 CR1LQ2VPA4 569 aa12□□□□□ -0.49
LIG1-218ENST00000599322 KLHL12Q53G59 568 aa12□□□□□ -0.49
LIG1-218ENST00000599322 ZNF362Q5T0B9 420 aaPredicted RBP12□□□□□ -0.49
LIG1-218ENST00000599322 SHQ1Q6PI26 577 aaKnown RBP12□□□□□ -0.49
LIG1-218ENST00000599322 ERI1Q8IV48 349 aaKnown RBP12□□□□□ -0.49
LIG1-218ENST00000599322 C10orf67Q8IYJ2 551 aa12□□□□□ -0.49
LIG1-218ENST00000599322 IQCF1Q8N6M8 205 aa12□□□□□ -0.49
LIG1-218ENST00000599322 ZNF511Q8NB15 262 aa12□□□□□ -0.49
LIG1-218ENST00000599322 OR6N2Q8NGY6 317 aa12□□□□□ -0.49
LIG1-218ENST00000599322 OR5K1Q8NHB7 308 aa12□□□□□ -0.49
LIG1-218ENST00000599322 SLCO4A1Q96BD0 722 aa12□□□□□ -0.49
LIG1-218ENST00000599322 KCNJ15Q99712 375 aa12□□□□□ -0.49
LIG1-218ENST00000599322 NMNAT2Q9BZQ4 307 aa12□□□□□ -0.49
LIG1-218ENST00000599322 POFUT1Q9H488 388 aa12□□□□□ -0.49
LIG1-218ENST00000599322 OPA3Q9H6K4 179 aa12□□□□□ -0.49
LIG1-218ENST00000599322 ZNF665Q9H7R5 613 aa12□□□□□ -0.49
LIG1-218ENST00000599322 WDR76Q9H967 626 aa12□□□□□ -0.49
LIG1-218ENST00000599322 PAPOLBQ9NRJ5 636 aaKnown RBP12□□□□□ -0.49
LIG1-218ENST00000599322 DDX28Q9NUL7 540 aaKnown RBP12□□□□□ -0.49
LIG1-218ENST00000599322 N6AMT1Q9Y5N5 214 aa12□□□□□ -0.49
LIG1-218ENST00000599322 TRAV20A0A0B4J274 112 aa11.99□□□□□ -0.49
LIG1-218ENST00000599322 FAM183AA6NL82 134 aa11.99□□□□□ -0.49
LIG1-218ENST00000599322 IQCF6A8MYZ5 107 aa11.99□□□□□ -0.49
LIG1-218ENST00000599322 G3V2T6 193 aa11.99□□□□□ -0.49
LIG1-218ENST00000599322 TIPRLO75663 272 aa11.99□□□□□ -0.49
LIG1-218ENST00000599322 SBK2P0C263 348 aa11.99□□□□□ -0.49
LIG1-218ENST00000599322 PRKACGP22612 351 aa11.99□□□□□ -0.49
LIG1-218ENST00000599322 IGFBP5P24593 272 aa11.99□□□□□ -0.49
LIG1-218ENST00000599322 IL2RGP31785 369 aa11.99□□□□□ -0.49
LIG1-218ENST00000599322 PRKXP51817 358 aa11.99□□□□□ -0.49
LIG1-218ENST00000599322 SNAPC1Q16533 368 aa11.99□□□□□ -0.49
LIG1-218ENST00000599322 COLCA1Q6ZS62 124 aa11.99□□□□□ -0.49
LIG1-218ENST00000599322 CCDC121Q6ZUS5 278 aa11.99□□□□□ -0.49
LIG1-218ENST00000599322 TMEM179BQ7Z7N9 219 aa11.99□□□□□ -0.49
LIG1-218ENST00000599322 ZDHHC13Q8IUH4 622 aa11.99□□□□□ -0.49
LIG1-218ENST00000599322 C1orf87Q8N0U7 546 aa11.99□□□□□ -0.49
LIG1-218ENST00000599322 KLHL36Q8N4N3 616 aa11.99□□□□□ -0.49
LIG1-218ENST00000599322 SPICQ8N5J4 248 aa11.99□□□□□ -0.49
LIG1-218ENST00000599322 BHLHE23Q8NDY6 225 aa11.99□□□□□ -0.49
LIG1-218ENST00000599322 TMEM186Q96B77 213 aa11.99□□□□□ -0.49
LIG1-218ENST00000599322 C1orf159Q96HA4 380 aa11.99□□□□□ -0.49
LIG1-218ENST00000599322 MAP6Q96JE9 813 aa11.99□□□□□ -0.49
LIG1-218ENST00000599322 OR2V2Q96R30 315 aa11.99□□□□□ -0.49
LIG1-218ENST00000599322 LPAR2Q9HBW0 351 aa11.99□□□□□ -0.49
LIG1-218ENST00000599322 TMEM106BQ9NUM4 274 aa11.99□□□□□ -0.49
LIG1-218ENST00000599322 UBAP1Q9NZ09 502 aa11.99□□□□□ -0.49
LIG1-218ENST00000599322 H2AFY2Q9P0M6 372 aaPredicted RBP11.99□□□□□ -0.49
LIG1-218ENST00000599322 AP4S1Q9Y587 144 aa11.99□□□□□ -0.49
LIG1-218ENST00000599322 NPTNQ9Y639 398 aa11.99□□□□□ -0.49
LIG1-218ENST00000599322 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.98□□□□□ -0.49
LIG1-218ENST00000599322 PRODHO43272 600 aa11.98□□□□□ -0.49
LIG1-218ENST00000599322 XRCC2O43543 280 aa11.98□□□□□ -0.49
LIG1-218ENST00000599322 ANXA2P07355 339 aaKnown RBP11.98□□□□□ -0.49
LIG1-218ENST00000599322 H2BFMP0C1H6 154 aa11.98□□□□□ -0.49
LIG1-218ENST00000599322 CFL1P23528 166 aaKnown RBP11.98□□□□□ -0.49
LIG1-218ENST00000599322 RPS27P42677 84 aaKnown RBP11.98□□□□□ -0.49
LIG1-218ENST00000599322 GK2Q14410 553 aaPredicted RBP11.98□□□□□ -0.49
LIG1-218ENST00000599322 SNCBQ16143 134 aa11.98□□□□□ -0.49
LIG1-218ENST00000599322 SLC35D3Q5M8T2 416 aa11.98□□□□□ -0.49
LIG1-218ENST00000599322 PLBD1Q6P4A8 553 aa11.98□□□□□ -0.49
LIG1-218ENST00000599322 MUC20Q8N307 709 aaPredicted RBP11.98□□□□□ -0.49
LIG1-218ENST00000599322 ZNF454Q8N9F8 522 aa11.98□□□□□ -0.49
LIG1-218ENST00000599322 OR11L1Q8NGX0 322 aa11.98□□□□□ -0.49
LIG1-218ENST00000599322 ITLN1Q8WWA0 313 aa11.98□□□□□ -0.49
LIG1-218ENST00000599322 REPIN1Q9BWE0 567 aaKnown RBP11.98□□□□□ -0.49
LIG1-218ENST00000599322 MED20Q9H944 212 aa11.98□□□□□ -0.49
LIG1-218ENST00000599322 KRT84Q9NSB2 600 aa11.98□□□□□ -0.49
LIG1-218ENST00000599322 HIF1ANQ9NWT6 349 aa11.98□□□□□ -0.49
LIG1-218ENST00000599322 TBX1O43435 398 aa11.97□□□□□ -0.49
LIG1-218ENST00000599322 CLUP10909 449 aa11.97□□□□□ -0.49
LIG1-218ENST00000599322 DDOSTP39656 456 aa11.97□□□□□ -0.49
LIG1-218ENST00000599322 CRISP1P54107 249 aa11.97□□□□□ -0.49
LIG1-218ENST00000599322 LMO4P61968 165 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms