RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 PAICSP22234 425 aaKnown RBP9.31□□□□□ -0.92
SHKBP1-206ENST00000595523 GSTT1P30711 240 aa9.31□□□□□ -0.92
SHKBP1-206ENST00000595523 LIPAP38571 399 aa9.31□□□□□ -0.92
SHKBP1-206ENST00000595523 GPR6P46095 362 aaPredicted RBP9.31□□□□□ -0.92
SHKBP1-206ENST00000595523 CHN2P52757 468 aa9.31□□□□□ -0.92
SHKBP1-206ENST00000595523 BLVRAP53004 296 aa9.31□□□□□ -0.92
SHKBP1-206ENST00000595523 TPTEP56180 551 aa9.31□□□□□ -0.92
SHKBP1-206ENST00000595523 TMEM33P57088 247 aa9.31□□□□□ -0.92
SHKBP1-206ENST00000595523 SNAI3Q3KNW1 292 aa9.31□□□□□ -0.92
SHKBP1-206ENST00000595523 CYB5R2Q6BCY4 276 aa9.31□□□□□ -0.92
SHKBP1-206ENST00000595523 SPATC1Q76KD6 591 aa9.31□□□□□ -0.92
SHKBP1-206ENST00000595523 ZDHHC13Q8IUH4 622 aa9.31□□□□□ -0.92
SHKBP1-206ENST00000595523 OR5L1Q8NGL2 311 aa9.31□□□□□ -0.92
SHKBP1-206ENST00000595523 OR6N2Q8NGY6 317 aa9.31□□□□□ -0.92
SHKBP1-206ENST00000595523 CLDND2Q8NHS1 167 aa9.31□□□□□ -0.92
SHKBP1-206ENST00000595523 RNF133Q8WVZ7 376 aa9.31□□□□□ -0.92
SHKBP1-206ENST00000595523 CENPNQ96H22 339 aaPredicted RBP9.31□□□□□ -0.92
SHKBP1-206ENST00000595523 C1orf159Q96HA4 380 aa9.31□□□□□ -0.92
SHKBP1-206ENST00000595523 ABHD6Q9BV23 337 aa9.31□□□□□ -0.92
SHKBP1-206ENST00000595523 NARFLQ9H6Q4 476 aa9.31□□□□□ -0.92
SHKBP1-206ENST00000595523 KRT84Q9NSB2 600 aa9.31□□□□□ -0.92
SHKBP1-206ENST00000595523 DECR2Q9NUI1 292 aa9.31□□□□□ -0.92
SHKBP1-206ENST00000595523 DCAF16Q9NXF7 216 aa9.31□□□□□ -0.92
SHKBP1-206ENST00000595523 TREM2Q9NZC2 230 aa9.31□□□□□ -0.92
SHKBP1-206ENST00000595523 OAZ3Q9UMX2 235 aa9.31□□□□□ -0.92
SHKBP1-206ENST00000595523 KLHDC2Q9Y2U9 406 aa9.31□□□□□ -0.92
SHKBP1-206ENST00000595523 A0A1B0GWJ7 208 aa9.3□□□□□ -0.92
SHKBP1-206ENST00000595523 CCDC182A6NF36 153 aa9.3□□□□□ -0.92
SHKBP1-206ENST00000595523 ZAR1LA6NP61 321 aa9.3□□□□□ -0.92
SHKBP1-206ENST00000595523 A8MV72 311 aaPredicted RBP9.3□□□□□ -0.92
SHKBP1-206ENST00000595523 IQCF6A8MYZ5 107 aa9.3□□□□□ -0.92
SHKBP1-206ENST00000595523 ZNF878C9JN71 531 aa9.3□□□□□ -0.92
SHKBP1-206ENST00000595523 H0YL77 283 aa9.3□□□□□ -0.92
SHKBP1-206ENST00000595523 EBAG9O00559 213 aa9.3□□□□□ -0.92
SHKBP1-206ENST00000595523 MLNRO43193 412 aa9.3□□□□□ -0.92
SHKBP1-206ENST00000595523 TPD52L2O43399 206 aaKnown RBP9.3□□□□□ -0.92
SHKBP1-206ENST00000595523 PPIHO43447 177 aaKnown RBP9.3□□□□□ -0.92
SHKBP1-206ENST00000595523 PRKYO43930 277 aa9.3□□□□□ -0.92
SHKBP1-206ENST00000595523 LCATP04180 440 aa9.3□□□□□ -0.92
SHKBP1-206ENST00000595523 SLC2A1P11166 492 aa9.3□□□□□ -0.92
SHKBP1-206ENST00000595523 POLR2IP36954 125 aaKnown RBP9.3□□□□□ -0.92
SHKBP1-206ENST00000595523 SLC6A9P48067 706 aa9.3□□□□□ -0.92
SHKBP1-206ENST00000595523 GZMKP49863 264 aa9.3□□□□□ -0.92
SHKBP1-206ENST00000595523 PRKXP51817 358 aa9.3□□□□□ -0.92
SHKBP1-206ENST00000595523 ESRRGP62508 458 aa9.3□□□□□ -0.92
SHKBP1-206ENST00000595523 TNFAIP6P98066 277 aaPredicted RBP9.3□□□□□ -0.92
SHKBP1-206ENST00000595523 EFNB1P98172 346 aa9.3□□□□□ -0.92
SHKBP1-206ENST00000595523 PPP2R2BQ00005 443 aa9.3□□□□□ -0.92
SHKBP1-206ENST00000595523 EIF2B1Q14232 305 aaKnown RBP9.3□□□□□ -0.92
SHKBP1-206ENST00000595523 SNAPC1Q16533 368 aa9.3□□□□□ -0.92
SHKBP1-206ENST00000595523 ZMAT1Q5H9K5 638 aa9.3□□□□□ -0.92
SHKBP1-206ENST00000595523 AVPI1Q5T686 147 aa9.3□□□□□ -0.92
SHKBP1-206ENST00000595523 SLX4IPQ5VYV7 408 aa9.3□□□□□ -0.92
SHKBP1-206ENST00000595523 C12orf73Q69YU5 71 aa9.3□□□□□ -0.92
SHKBP1-206ENST00000595523 DRAM2Q6UX65 266 aa9.3□□□□□ -0.92
SHKBP1-206ENST00000595523 CXXC5Q7LFL8 322 aaKnown RBP9.3□□□□□ -0.92
SHKBP1-206ENST00000595523 PRIMA1Q86XR5 153 aa9.3□□□□□ -0.92
SHKBP1-206ENST00000595523 BHLHE23Q8NDY6 225 aa9.3□□□□□ -0.92
SHKBP1-206ENST00000595523 OR8G5Q8NG78 346 aa9.3□□□□□ -0.92
SHKBP1-206ENST00000595523 OR2Z1Q8NG97 314 aa9.3□□□□□ -0.92
SHKBP1-206ENST00000595523 OR10AD1Q8NGE0 317 aa9.3□□□□□ -0.92
SHKBP1-206ENST00000595523 OR2AE1Q8NHA4 323 aa9.3□□□□□ -0.92
SHKBP1-206ENST00000595523 SPTSSAQ969W0 71 aa9.3□□□□□ -0.92
SHKBP1-206ENST00000595523 ELMOD3Q96FG2 381 aa9.3□□□□□ -0.92
SHKBP1-206ENST00000595523 DIRC2Q96SL1 478 aa9.3□□□□□ -0.92
SHKBP1-206ENST00000595523 KCNJ15Q99712 375 aa9.3□□□□□ -0.92
SHKBP1-206ENST00000595523 CIB1Q99828 191 aa9.3□□□□□ -0.92
SHKBP1-206ENST00000595523 PKP2Q99959 881 aa9.3□□□□□ -0.92
SHKBP1-206ENST00000595523 COPS4Q9BT78 406 aa9.3□□□□□ -0.92
SHKBP1-206ENST00000595523 CENPMQ9NSP4 180 aa9.3□□□□□ -0.92
SHKBP1-206ENST00000595523 TVP23BQ9NYZ1 205 aa9.3□□□□□ -0.92
SHKBP1-206ENST00000595523 SAC3D1A6NKF1 404 aa9.29□□□□□ -0.92
SHKBP1-206ENST00000595523 FAM157AC9JC47 383 aa9.29□□□□□ -0.92
SHKBP1-206ENST00000595523 IGFBP5P24593 272 aa9.29□□□□□ -0.92
SHKBP1-206ENST00000595523 OPRL1P41146 370 aa9.29□□□□□ -0.92
SHKBP1-206ENST00000595523 NAA10P41227 235 aaPredicted RBP9.29□□□□□ -0.92
SHKBP1-206ENST00000595523 CDH15P55291 814 aa9.29□□□□□ -0.92
SHKBP1-206ENST00000595523 LMO4P61968 165 aa9.29□□□□□ -0.92
SHKBP1-206ENST00000595523 MVKQ03426 396 aa9.29□□□□□ -0.92
SHKBP1-206ENST00000595523 ZNF92Q03936 586 aa9.29□□□□□ -0.92
SHKBP1-206ENST00000595523 APOFQ13790 326 aa9.29□□□□□ -0.92
SHKBP1-206ENST00000595523 HFEQ30201 348 aa9.29□□□□□ -0.92
SHKBP1-206ENST00000595523 KRTAP21-3Q3LHN1 58 aa9.29□□□□□ -0.92
SHKBP1-206ENST00000595523 KLHL12Q53G59 568 aa9.29□□□□□ -0.92
SHKBP1-206ENST00000595523 SLC35D3Q5M8T2 416 aa9.29□□□□□ -0.92
SHKBP1-206ENST00000595523 GLYATL3Q5SZD4 288 aa9.29□□□□□ -0.92
SHKBP1-206ENST00000595523 PRSS45Q7RTY3 260 aa9.29□□□□□ -0.92
SHKBP1-206ENST00000595523 BCDIN3DQ7Z5W3 292 aaKnown RBP9.29□□□□□ -0.92
SHKBP1-206ENST00000595523 OTOSQ8NHW6 89 aa9.29□□□□□ -0.92
SHKBP1-206ENST00000595523 ITLN1Q8WWA0 313 aa9.29□□□□□ -0.92
SHKBP1-206ENST00000595523 CCL17Q92583 94 aa9.29□□□□□ -0.92
SHKBP1-206ENST00000595523 HPS1Q92902 700 aa9.29□□□□□ -0.92
SHKBP1-206ENST00000595523 PLEKHA8Q96JA3 519 aa9.29□□□□□ -0.92
SHKBP1-206ENST00000595523 OR2V2Q96R30 315 aa9.29□□□□□ -0.92
SHKBP1-206ENST00000595523 SLC30A2Q9BRI3 323 aa9.29□□□□□ -0.92
SHKBP1-206ENST00000595523 EGLN1Q9GZT9 426 aa9.29□□□□□ -0.92
SHKBP1-206ENST00000595523 WIPI2Q9Y4P8 454 aa9.29□□□□□ -0.92
SHKBP1-206ENST00000595523 DNHD1Q96M86 4753 aa9.28□□□□□ -0.92
SHKBP1-206ENST00000595523 LOC100289279A0A1B0GTE1 492 aa9.28□□□□□ -0.92
SHKBP1-206ENST00000595523 PRR32B1ATL7 298 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms