RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 LOC100130705A0A1B0GUX0 176 aa22■■□□□ 1.11
TRIM28-204ENST00000594806 NDUFS8O00217 210 aa22■■□□□ 1.11
TRIM28-204ENST00000594806 TIMM8AO60220 97 aaPredicted RBP22■■□□□ 1.11
TRIM28-204ENST00000594806 ADH4P08319 380 aa22■■□□□ 1.11
TRIM28-204ENST00000594806 PDLIM4P50479 330 aa22■■□□□ 1.11
TRIM28-204ENST00000594806 ZNF81P51508 661 aa22■■□□□ 1.11
TRIM28-204ENST00000594806 PRKXP51817 358 aa22■■□□□ 1.11
TRIM28-204ENST00000594806 OCLNQ16625 522 aa22■■□□□ 1.11
TRIM28-204ENST00000594806 FAM209AQ5JX71 171 aa22■■□□□ 1.11
TRIM28-204ENST00000594806 NAA40Q86UY6 237 aa22■■□□□ 1.11
TRIM28-204ENST00000594806 ZNF555Q8NEP9 628 aa22■■□□□ 1.11
TRIM28-204ENST00000594806 FAM168AQ92567 244 aa22■■□□□ 1.11
TRIM28-204ENST00000594806 AMELYQ99218 206 aa22■■□□□ 1.11
TRIM28-204ENST00000594806 TPK1Q9H3S4 243 aa22■■□□□ 1.11
TRIM28-204ENST00000594806 OPA3Q9H6K4 179 aa22■■□□□ 1.11
TRIM28-204ENST00000594806 ADGRL4Q9HBW9 690 aa22■■□□□ 1.11
TRIM28-204ENST00000594806 PTTG3PQ9NZH4 202 aa22■■□□□ 1.11
TRIM28-204ENST00000594806 LOC390937A0A1W2PQ73 354 aa21.99■■□□□ 1.11
TRIM28-204ENST00000594806 CX3CR1P49238 355 aa21.99■■□□□ 1.11
TRIM28-204ENST00000594806 MRPS11P82912 194 aaKnown RBP21.99■■□□□ 1.11
TRIM28-204ENST00000594806 SPATC1Q76KD6 591 aa21.99■■□□□ 1.11
TRIM28-204ENST00000594806 ZNF525Q8N782 197 aa21.99■■□□□ 1.11
TRIM28-204ENST00000594806 UBASH3BQ8TF42 649 aa21.99■■□□□ 1.11
TRIM28-204ENST00000594806 CLN6Q9NWW5 311 aa21.99■■□□□ 1.11
TRIM28-204ENST00000594806 ZNF254O75437 659 aa21.98■■□□□ 1.11
TRIM28-204ENST00000594806 MRPL3P09001 348 aaKnown RBP21.98■■□□□ 1.11
TRIM28-204ENST00000594806 SBK2P0C263 348 aa21.98■■□□□ 1.11
TRIM28-204ENST00000594806 DAOP14920 347 aa21.98■■□□□ 1.11
TRIM28-204ENST00000594806 PEX2P28328 305 aa21.98■■□□□ 1.11
TRIM28-204ENST00000594806 DCTDP32321 178 aa21.98■■□□□ 1.11
TRIM28-204ENST00000594806 ROM1Q03395 351 aa21.98■■□□□ 1.11
TRIM28-204ENST00000594806 TNK1Q13470 666 aa21.98■■□□□ 1.11
TRIM28-204ENST00000594806 LRRC36Q1X8D7 754 aa21.98■■□□□ 1.11
TRIM28-204ENST00000594806 ALKBH6Q3KRA9 238 aa21.98■■□□□ 1.11
TRIM28-204ENST00000594806 TMEM255AQ5JRV8 349 aa21.98■■□□□ 1.11
TRIM28-204ENST00000594806 OGFRL1Q5TC84 451 aaPredicted RBP21.98■■□□□ 1.11
TRIM28-204ENST00000594806 LPCAT4Q643R3 524 aa21.98■■□□□ 1.11
TRIM28-204ENST00000594806 KRT77Q7Z794 578 aa21.98■■□□□ 1.11
TRIM28-204ENST00000594806 ZNF786Q8N393 782 aa21.98■■□□□ 1.11
TRIM28-204ENST00000594806 GALNT4Q8N4A0 578 aa21.98■■□□□ 1.11
TRIM28-204ENST00000594806 OR52H1Q8NGJ2 320 aa21.98■■□□□ 1.11
TRIM28-204ENST00000594806 Q96MT0 163 aa21.98■■□□□ 1.11
TRIM28-204ENST00000594806 MROQ9BYG7 248 aa21.98■■□□□ 1.11
TRIM28-204ENST00000594806 DNAJC27Q9NZQ0 273 aa21.98■■□□□ 1.11
TRIM28-204ENST00000594806 MAP1AP78559 2803 aaPredicted RBP21.98■■□□□ 1.11
TRIM28-204ENST00000594806 XRCC2O43543 280 aa21.97■■□□□ 1.11
TRIM28-204ENST00000594806 SLC25A16P16260 332 aa21.97■■□□□ 1.11
TRIM28-204ENST00000594806 GK2Q14410 553 aaPredicted RBP21.97■■□□□ 1.11
TRIM28-204ENST00000594806 HLXQ14774 488 aaPredicted RBP21.97■■□□□ 1.11
TRIM28-204ENST00000594806 PGAP1Q75T13 922 aa21.97■■□□□ 1.11
TRIM28-204ENST00000594806 SLC35F2Q8IXU6 374 aa21.97■■□□□ 1.11
TRIM28-204ENST00000594806 ZNF540Q8NDQ6 660 aa21.97■■□□□ 1.11
TRIM28-204ENST00000594806 APOL4Q9BPW4 351 aa21.97■■□□□ 1.11
TRIM28-204ENST00000594806 VCXQ9H320 206 aa21.97■■□□□ 1.11
TRIM28-204ENST00000594806 DLL4Q9NR61 685 aa21.97■■□□□ 1.11
TRIM28-204ENST00000594806 KLHDC2Q9Y2U9 406 aa21.97■■□□□ 1.11
TRIM28-204ENST00000594806 IQCF6A8MYZ5 107 aa21.96■■□□□ 1.11
TRIM28-204ENST00000594806 ZNF670-ZNF695F2Z2N8 137 aa21.96■■□□□ 1.11
TRIM28-204ENST00000594806 LY6HO94772 140 aa21.96■■□□□ 1.11
TRIM28-204ENST00000594806 OR2T7P0C7T2 308 aa21.96■■□□□ 1.11
TRIM28-204ENST00000594806 HCCSP53701 268 aa21.96■■□□□ 1.11
TRIM28-204ENST00000594806 CDK5R2Q13319 367 aa21.96■■□□□ 1.11
TRIM28-204ENST00000594806 SNAI3Q3KNW1 292 aa21.96■■□□□ 1.11
TRIM28-204ENST00000594806 TTC23Q5W5X9 447 aa21.96■■□□□ 1.11
TRIM28-204ENST00000594806 MRPL21Q7Z2W9 205 aaKnown RBP21.96■■□□□ 1.11
TRIM28-204ENST00000594806 ZNF679Q8IYX0 411 aa21.96■■□□□ 1.11
TRIM28-204ENST00000594806 OR51G2Q8NGK0 314 aa21.96■■□□□ 1.11
TRIM28-204ENST00000594806 OR2T27Q8NH04 317 aa21.96■■□□□ 1.11
TRIM28-204ENST00000594806 RHOXF1Q8NHV9 184 aa21.96■■□□□ 1.11
TRIM28-204ENST00000594806 C10orf105Q8TEF2 133 aa21.96■■□□□ 1.11
TRIM28-204ENST00000594806 RDH5Q92781 318 aa21.96■■□□□ 1.11
TRIM28-204ENST00000594806 UBE2FQ969M7 185 aa21.96■■□□□ 1.11
TRIM28-204ENST00000594806 C18orf12Q96KH6 178 aa21.96■■□□□ 1.11
TRIM28-204ENST00000594806 OR8B4Q96RC9 309 aa21.96■■□□□ 1.11
TRIM28-204ENST00000594806 DECR2Q9NUI1 292 aa21.96■■□□□ 1.11
TRIM28-204ENST00000594806 HIVEP1P15822 2718 aa21.95■■□□□ 1.1
TRIM28-204ENST00000594806 TRIM64A6NGJ6 449 aa21.95■■□□□ 1.1
TRIM28-204ENST00000594806 TRIM64BA6NI03 449 aa21.95■■□□□ 1.1
TRIM28-204ENST00000594806 ACOD1A6NK06 481 aa21.95■■□□□ 1.1
TRIM28-204ENST00000594806 DLGAP1O14490 977 aa21.95■■□□□ 1.1
TRIM28-204ENST00000594806 IGHV1-46P01743 117 aa21.95■■□□□ 1.1
TRIM28-204ENST00000594806 ANXA2P07355 339 aaKnown RBP21.95■■□□□ 1.1
TRIM28-204ENST00000594806 CD55P08174 381 aa21.95■■□□□ 1.1
TRIM28-204ENST00000594806 CFL1P23528 166 aaKnown RBP21.95■■□□□ 1.1
TRIM28-204ENST00000594806 ATP6V1E1P36543 226 aa21.95■■□□□ 1.1
TRIM28-204ENST00000594806 ZNF121P58317 390 aaPredicted RBP21.95■■□□□ 1.1
TRIM28-204ENST00000594806 SLC34A1Q06495 639 aa21.95■■□□□ 1.1
TRIM28-204ENST00000594806 EGR3Q06889 387 aa21.95■■□□□ 1.1
TRIM28-204ENST00000594806 LRRN1Q6UXK5 716 aa21.95■■□□□ 1.1
TRIM28-204ENST00000594806 PRSS45Q7RTY3 260 aa21.95■■□□□ 1.1
TRIM28-204ENST00000594806 OR8G5Q8NG78 346 aa21.95■■□□□ 1.1
TRIM28-204ENST00000594806 SPSB4Q96A44 273 aa21.95■■□□□ 1.1
TRIM28-204ENST00000594806 REPIN1Q9BWE0 567 aaKnown RBP21.95■■□□□ 1.1
TRIM28-204ENST00000594806 EGLN1Q9GZT9 426 aa21.95■■□□□ 1.1
TRIM28-204ENST00000594806 OR10A2Q9H208 303 aa21.95■■□□□ 1.1
TRIM28-204ENST00000594806 RGCCQ9H4X1 137 aa21.95■■□□□ 1.1
TRIM28-204ENST00000594806 ZSCAN5BA6NJL1 495 aa21.94■■□□□ 1.1
TRIM28-204ENST00000594806 H0YHG0 523 aa21.94■■□□□ 1.1
TRIM28-204ENST00000594806 H7C1Q1 480 aa21.94■■□□□ 1.1
TRIM28-204ENST00000594806 ENTPD6O75354 484 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms