RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 RDH5Q92781 318 aa12.39□□□□□ -0.43
VRK3-206ENST00000594090 YIPF5Q969M3 257 aa12.39□□□□□ -0.43
VRK3-206ENST00000594090 IL4I1Q96RQ9 567 aa12.39□□□□□ -0.43
VRK3-206ENST00000594090 TEAD3Q99594 435 aa12.39□□□□□ -0.43
VRK3-206ENST00000594090 DECR2Q9NUI1 292 aa12.39□□□□□ -0.43
VRK3-206ENST00000594090 ZDHHC8Q9ULC8 765 aa12.39□□□□□ -0.43
VRK3-206ENST00000594090 ORC6Q9Y5N6 252 aa12.39□□□□□ -0.43
VRK3-206ENST00000594090 ACANP16112 2415 aa12.39□□□□□ -0.43
VRK3-206ENST00000594090 TPD52L2O43399 206 aaKnown RBP12.38□□□□□ -0.43
VRK3-206ENST00000594090 RP2O75695 350 aa12.38□□□□□ -0.43
VRK3-206ENST00000594090 LYNP07948 512 aa12.38□□□□□ -0.43
VRK3-206ENST00000594090 OPRL1P41146 370 aa12.38□□□□□ -0.43
VRK3-206ENST00000594090 RAD23AP54725 363 aa12.38□□□□□ -0.43
VRK3-206ENST00000594090 GABPB1Q06547 395 aaPredicted RBP12.38□□□□□ -0.43
VRK3-206ENST00000594090 MALLQ13021 153 aa12.38□□□□□ -0.43
VRK3-206ENST00000594090 GGTLC2Q14390 218 aa12.38□□□□□ -0.43
VRK3-206ENST00000594090 GK2Q14410 553 aaPredicted RBP12.38□□□□□ -0.43
VRK3-206ENST00000594090 ZSCAN26Q16670 478 aa12.38□□□□□ -0.43
VRK3-206ENST00000594090 AADACL4Q5VUY2 407 aa12.38□□□□□ -0.43
VRK3-206ENST00000594090 OR2T2Q6IF00 324 aa12.38□□□□□ -0.43
VRK3-206ENST00000594090 Q6ZR03 302 aa12.38□□□□□ -0.43
VRK3-206ENST00000594090 Q71RC1 249 aaPredicted RBP12.38□□□□□ -0.43
VRK3-206ENST00000594090 SLC16A9Q7RTY1 509 aa12.38□□□□□ -0.43
VRK3-206ENST00000594090 OR5AS1Q8N127 324 aa12.38□□□□□ -0.43
VRK3-206ENST00000594090 THEM6Q8WUY1 208 aa12.38□□□□□ -0.43
VRK3-206ENST00000594090 STMN2Q93045 179 aa12.38□□□□□ -0.43
VRK3-206ENST00000594090 DIRC2Q96SL1 478 aa12.38□□□□□ -0.43
VRK3-206ENST00000594090 C9orf16Q9BUW7 83 aa12.38□□□□□ -0.43
VRK3-206ENST00000594090 TOR3AQ9H497 397 aa12.38□□□□□ -0.43
VRK3-206ENST00000594090 CHODLQ9H9P2 273 aa12.38□□□□□ -0.43
VRK3-206ENST00000594090 SAP30LQ9HAJ7 183 aa12.38□□□□□ -0.43
VRK3-206ENST00000594090 KLHDC2Q9Y2U9 406 aa12.38□□□□□ -0.43
VRK3-206ENST00000594090 IGHV4-61A0A0C4DH41 118 aa12.37□□□□□ -0.43
VRK3-206ENST00000594090 C5orf63A6NC05 138 aa12.37□□□□□ -0.43
VRK3-206ENST00000594090 SLC22A31A6NKX4 558 aa12.37□□□□□ -0.43
VRK3-206ENST00000594090 IQCF6A8MYZ5 107 aa12.37□□□□□ -0.43
VRK3-206ENST00000594090 CDC14BO60729 498 aa12.37□□□□□ -0.43
VRK3-206ENST00000594090 CD55P08174 381 aa12.37□□□□□ -0.43
VRK3-206ENST00000594090 MRPL3P09001 348 aaKnown RBP12.37□□□□□ -0.43
VRK3-206ENST00000594090 SLC2A1P11166 492 aa12.37□□□□□ -0.43
VRK3-206ENST00000594090 HSD11B1P28845 292 aa12.37□□□□□ -0.43
VRK3-206ENST00000594090 CX3CR1P49238 355 aa12.37□□□□□ -0.43
VRK3-206ENST00000594090 CDK5R2Q13319 367 aa12.37□□□□□ -0.43
VRK3-206ENST00000594090 GLYATL3Q5SZD4 288 aa12.37□□□□□ -0.43
VRK3-206ENST00000594090 USP51Q70EK9 711 aa12.37□□□□□ -0.43
VRK3-206ENST00000594090 MEPCEQ7L2J0 689 aaKnown RBP12.37□□□□□ -0.43
VRK3-206ENST00000594090 MRPL21Q7Z2W9 205 aaKnown RBP12.37□□□□□ -0.43
VRK3-206ENST00000594090 GID4Q8IVV7 300 aa12.37□□□□□ -0.43
VRK3-206ENST00000594090 ZNF283Q8N7M2 679 aa12.37□□□□□ -0.43
VRK3-206ENST00000594090 YIPF3Q9GZM5 350 aa12.37□□□□□ -0.43
VRK3-206ENST00000594090 ZNF275Q9NSD4 429 aaPredicted RBP12.37□□□□□ -0.43
VRK3-206ENST00000594090 H2AFY2Q9P0M6 372 aaPredicted RBP12.37□□□□□ -0.43
VRK3-206ENST00000594090 TEP1Q99973 2627 aaKnown RBP12.37□□□□□ -0.43
VRK3-206ENST00000594090 TANC2Q9HCD6 1990 aa12.37□□□□□ -0.43
VRK3-206ENST00000594090 IGHV1-69-2A0A0G2JMI3 117 aa12.37□□□□□ -0.43
VRK3-206ENST00000594090 LILRA1O75019 489 aa12.37□□□□□ -0.43
VRK3-206ENST00000594090 BAG2O95816 211 aa12.37□□□□□ -0.43
VRK3-206ENST00000594090 H2BFMP0C1H6 154 aa12.37□□□□□ -0.43
VRK3-206ENST00000594090 SELEP16581 610 aa12.37□□□□□ -0.43
VRK3-206ENST00000594090 ALOX5APP20292 161 aa12.37□□□□□ -0.43
VRK3-206ENST00000594090 PRSS12P56730 875 aa12.37□□□□□ -0.43
VRK3-206ENST00000594090 TNFAIP6P98066 277 aaPredicted RBP12.37□□□□□ -0.43
VRK3-206ENST00000594090 TMEM249Q2WGJ8 235 aa12.37□□□□□ -0.43
VRK3-206ENST00000594090 PGAP1Q75T13 922 aa12.37□□□□□ -0.43
VRK3-206ENST00000594090 BHLHE23Q8NDY6 225 aa12.37□□□□□ -0.43
VRK3-206ENST00000594090 OR8G5Q8NG78 346 aa12.37□□□□□ -0.43
VRK3-206ENST00000594090 OR2Z1Q8NG97 314 aa12.37□□□□□ -0.43
VRK3-206ENST00000594090 OR2AE1Q8NHA4 323 aa12.37□□□□□ -0.43
VRK3-206ENST00000594090 FAM81AQ8TBF8 368 aa12.37□□□□□ -0.43
VRK3-206ENST00000594090 ELMOD3Q96FG2 381 aa12.37□□□□□ -0.43
VRK3-206ENST00000594090 ZNF582Q96NG8 517 aaPredicted RBP12.37□□□□□ -0.43
VRK3-206ENST00000594090 CNN2Q99439 309 aaKnown RBP12.37□□□□□ -0.43
VRK3-206ENST00000594090 LAMP5Q9UJQ1 280 aa12.37□□□□□ -0.43
VRK3-206ENST00000594090 ANKRD65E5RJM6 399 aa12.36□□□□□ -0.43
VRK3-206ENST00000594090 E9PQ18 207 aa12.36□□□□□ -0.43
VRK3-206ENST00000594090 APOC1P02654 83 aa12.36□□□□□ -0.43
VRK3-206ENST00000594090 ANXA2P07355 339 aaKnown RBP12.36□□□□□ -0.43
VRK3-206ENST00000594090 TACSTD2P09758 323 aa12.36□□□□□ -0.43
VRK3-206ENST00000594090 TNFSF4P23510 183 aa12.36□□□□□ -0.43
VRK3-206ENST00000594090 CRYBB2P43320 205 aa12.36□□□□□ -0.43
VRK3-206ENST00000594090 GPR6P46095 362 aaPredicted RBP12.36□□□□□ -0.43
VRK3-206ENST00000594090 HCCSP53701 268 aa12.36□□□□□ -0.43
VRK3-206ENST00000594090 ZNF121P58317 390 aaPredicted RBP12.36□□□□□ -0.43
VRK3-206ENST00000594090 CDC42P60953 191 aa12.36□□□□□ -0.43
VRK3-206ENST00000594090 ZNF92Q03936 586 aa12.36□□□□□ -0.43
VRK3-206ENST00000594090 TRIP10Q15642 601 aa12.36□□□□□ -0.43
VRK3-206ENST00000594090 ZIK1Q3SY52 487 aaPredicted RBP12.36□□□□□ -0.43
VRK3-206ENST00000594090 SPRNQ5BIV9 151 aa12.36□□□□□ -0.43
VRK3-206ENST00000594090 LRRN1Q6UXK5 716 aa12.36□□□□□ -0.43
VRK3-206ENST00000594090 PRSS45Q7RTY3 260 aa12.36□□□□□ -0.43
VRK3-206ENST00000594090 OR8J1Q8NGP2 316 aa12.36□□□□□ -0.43
VRK3-206ENST00000594090 EME1Q96AY2 570 aa12.36□□□□□ -0.43
VRK3-206ENST00000594090 HRASLS5Q96KN8 279 aa12.36□□□□□ -0.43
VRK3-206ENST00000594090 MBOAT4Q96T53 435 aa12.36□□□□□ -0.43
VRK3-206ENST00000594090 SLC29A1Q99808 456 aa12.36□□□□□ -0.43
VRK3-206ENST00000594090 EGLN1Q9GZT9 426 aa12.36□□□□□ -0.43
VRK3-206ENST00000594090 ADGRL4Q9HBW9 690 aa12.36□□□□□ -0.43
VRK3-206ENST00000594090 DNAJC27Q9NZQ0 273 aa12.36□□□□□ -0.43
VRK3-206ENST00000594090 N6AMT1Q9Y5N5 214 aa12.36□□□□□ -0.43
VRK3-206ENST00000594090 CACNG2Q9Y698 323 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms