RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 CHIAQ9BZP6 476 aa13.6□□□□□ -0.23
LIG1-205ENST00000593425 VIPAS39Q9H9C1 493 aa13.6□□□□□ -0.23
LIG1-205ENST00000593425 UFSP2Q9NUQ7 469 aa13.6□□□□□ -0.23
LIG1-205ENST00000593425 PDP1Q9P0J1 537 aaPredicted RBP13.6□□□□□ -0.23
LIG1-205ENST00000593425 CTSZQ9UBR2 303 aa13.6□□□□□ -0.23
LIG1-205ENST00000593425 TMCC3Q9ULS5 477 aa13.6□□□□□ -0.23
LIG1-205ENST00000593425 B9D1Q9UPM9 204 aa13.6□□□□□ -0.23
LIG1-205ENST00000593425 A0A1W2PRQ8 180 aa13.59□□□□□ -0.23
LIG1-205ENST00000593425 DIRAS1O95057 198 aa13.59□□□□□ -0.23
LIG1-205ENST00000593425 SFTPBP07988 381 aa13.59□□□□□ -0.23
LIG1-205ENST00000593425 ACSM4P0C7M7 580 aa13.59□□□□□ -0.23
LIG1-205ENST00000593425 IRF2P14316 349 aa13.59□□□□□ -0.23
LIG1-205ENST00000593425 PSMB10P40306 273 aa13.59□□□□□ -0.23
LIG1-205ENST00000593425 CD200P41217 278 aa13.59□□□□□ -0.23
LIG1-205ENST00000593425 RPS6KA3P51812 740 aa13.59□□□□□ -0.23
LIG1-205ENST00000593425 DGCR6Q14129 220 aa13.59□□□□□ -0.23
LIG1-205ENST00000593425 GPR157Q5UAW9 335 aa13.59□□□□□ -0.23
LIG1-205ENST00000593425 SLC18B1Q6NT16 456 aa13.59□□□□□ -0.23
LIG1-205ENST00000593425 C8orf82Q6P1X6 216 aaPredicted RBP13.59□□□□□ -0.23
LIG1-205ENST00000593425 DNM1P34Q6PK57 102 aa13.59□□□□□ -0.23
LIG1-205ENST00000593425 Q6YL49 198 aa13.59□□□□□ -0.23
LIG1-205ENST00000593425 OR6V1Q8N148 313 aa13.59□□□□□ -0.23
LIG1-205ENST00000593425 CELF2-AS1Q8N7Q2 184 aa13.59□□□□□ -0.23
LIG1-205ENST00000593425 FAM162AQ96A26 154 aa13.59□□□□□ -0.23
LIG1-205ENST00000593425 PCGF1Q9BSM1 259 aa13.59□□□□□ -0.23
LIG1-205ENST00000593425 SRA1Q9HD15 236 aaKnown RBP13.59□□□□□ -0.23
LIG1-205ENST00000593425 C1RLQ9NZP8 487 aa13.59□□□□□ -0.23
LIG1-205ENST00000593425 NDUFAF4Q9P032 175 aa13.59□□□□□ -0.23
LIG1-205ENST00000593425 UNC119BA6NIH7 251 aa13.58□□□□□ -0.24
LIG1-205ENST00000593425 F5H5K5 113 aa13.58□□□□□ -0.24
LIG1-205ENST00000593425 SLC22A2O15244 555 aa13.58□□□□□ -0.24
LIG1-205ENST00000593425 ENSAO43768 121 aaKnown RBP13.58□□□□□ -0.24
LIG1-205ENST00000593425 SASH3O75995 380 aa13.58□□□□□ -0.24
LIG1-205ENST00000593425 MELTFP08582 738 aa13.58□□□□□ -0.24
LIG1-205ENST00000593425 ANOS1P23352 680 aa13.58□□□□□ -0.24
LIG1-205ENST00000593425 CRABP1P29762 137 aa13.58□□□□□ -0.24
LIG1-205ENST00000593425 CFHR2P36980 270 aa13.58□□□□□ -0.24
LIG1-205ENST00000593425 MDH1P40925 334 aaKnown RBP13.58□□□□□ -0.24
LIG1-205ENST00000593425 OR11L1Q8NGX0 322 aa13.58□□□□□ -0.24
LIG1-205ENST00000593425 OR4F5Q8NH21 305 aa13.58□□□□□ -0.24
LIG1-205ENST00000593425 RP9Q8TA86 221 aaKnown RBP13.58□□□□□ -0.24
LIG1-205ENST00000593425 SLCO4A1Q96BD0 722 aa13.58□□□□□ -0.24
LIG1-205ENST00000593425 TECTBQ96PL2 329 aa13.58□□□□□ -0.24
LIG1-205ENST00000593425 ERMAPQ96PL5 475 aaPredicted RBP13.58□□□□□ -0.24
LIG1-205ENST00000593425 TBX15Q96SF7 602 aa13.58□□□□□ -0.24
LIG1-205ENST00000593425 NMNAT3Q96T66 252 aa13.58□□□□□ -0.24
LIG1-205ENST00000593425 ATF6BQ99941 703 aa13.58□□□□□ -0.24
LIG1-205ENST00000593425 FUZQ9BT04 418 aa13.58□□□□□ -0.24
LIG1-205ENST00000593425 FN3KQ9H479 309 aa13.58□□□□□ -0.24
LIG1-205ENST00000593425 BEX1Q9HBH7 125 aa13.58□□□□□ -0.24
LIG1-205ENST00000593425 PNRC2Q9NPJ4 139 aaKnown RBP13.58□□□□□ -0.24
LIG1-205ENST00000593425 AURKCQ9UQB9 309 aa13.58□□□□□ -0.24
LIG1-205ENST00000593425 A0A1B0GUS0 222 aa13.57□□□□□ -0.24
LIG1-205ENST00000593425 LCATP04180 440 aa13.57□□□□□ -0.24
LIG1-205ENST00000593425 COX4I1P13073 169 aa13.57□□□□□ -0.24
LIG1-205ENST00000593425 MMP9P14780 707 aa13.57□□□□□ -0.24
LIG1-205ENST00000593425 KRTAP10-3P60369 221 aa13.57□□□□□ -0.24
LIG1-205ENST00000593425 TRAP1Q12931 704 aaKnown RBP13.57□□□□□ -0.24
LIG1-205ENST00000593425 OCLNQ16625 522 aa13.57□□□□□ -0.24
LIG1-205ENST00000593425 ZNF362Q5T0B9 420 aaPredicted RBP13.57□□□□□ -0.24
LIG1-205ENST00000593425 OLFML2AQ68BL7 652 aa13.57□□□□□ -0.24
LIG1-205ENST00000593425 SFRP4Q6FHJ7 346 aaPredicted RBP13.57□□□□□ -0.24
LIG1-205ENST00000593425 SMARCD3Q6STE5 483 aa13.57□□□□□ -0.24
LIG1-205ENST00000593425 C17orf107Q6ZR85 190 aa13.57□□□□□ -0.24
LIG1-205ENST00000593425 FAM86B1Q8N7N1 296 aa13.57□□□□□ -0.24
LIG1-205ENST00000593425 OR52J3Q8NH60 311 aa13.57□□□□□ -0.24
LIG1-205ENST00000593425 FANK1Q8TC84 345 aa13.57□□□□□ -0.24
LIG1-205ENST00000593425 ERGIC1Q969X5 290 aa13.57□□□□□ -0.24
LIG1-205ENST00000593425 PITX2Q99697 317 aa13.57□□□□□ -0.24
LIG1-205ENST00000593425 CITED1Q99966 193 aa13.57□□□□□ -0.24
LIG1-205ENST00000593425 OR52D1Q9H346 318 aa13.57□□□□□ -0.24
LIG1-205ENST00000593425 MMADHCQ9H3L0 296 aaPredicted RBP13.57□□□□□ -0.24
LIG1-205ENST00000593425 NOX4Q9NPH5 578 aa13.57□□□□□ -0.24
LIG1-205ENST00000593425 CENPVL3A0A0U1RRI6 287 aa13.56□□□□□ -0.24
LIG1-205ENST00000593425 ZNF879B4DU55 563 aa13.56□□□□□ -0.24
LIG1-205ENST00000593425 TNFRSF13BO14836 293 aaPredicted RBP13.56□□□□□ -0.24
LIG1-205ENST00000593425 NDUFA7O95182 113 aa13.56□□□□□ -0.24
LIG1-205ENST00000593425 CRYBA1P05813 215 aa13.56□□□□□ -0.24
LIG1-205ENST00000593425 HIST1H1CP16403 213 aaKnown RBP13.56□□□□□ -0.24
LIG1-205ENST00000593425 RHCEP18577 417 aa13.56□□□□□ -0.24
LIG1-205ENST00000593425 CA6P23280 308 aa13.56□□□□□ -0.24
LIG1-205ENST00000593425 GGT2P36268 569 aa13.56□□□□□ -0.24
LIG1-205ENST00000593425 NPY4RP50391 375 aa13.56□□□□□ -0.24
LIG1-205ENST00000593425 BPIFB3P59826 476 aa13.56□□□□□ -0.24
LIG1-205ENST00000593425 BRICD5Q6PL45 260 aa13.56□□□□□ -0.24
LIG1-205ENST00000593425 PGAP1Q75T13 922 aa13.56□□□□□ -0.24
LIG1-205ENST00000593425 RHOUQ7L0Q8 258 aa13.56□□□□□ -0.24
LIG1-205ENST00000593425 TMEM86BQ8N661 226 aa13.56□□□□□ -0.24
LIG1-205ENST00000593425 BOLLQ8N9W6 283 aaKnown RBP13.56□□□□□ -0.24
LIG1-205ENST00000593425 OR4K13Q8NH42 304 aa13.56□□□□□ -0.24
LIG1-205ENST00000593425 C7orf34Q96L11 122 aa13.56□□□□□ -0.24
LIG1-205ENST00000593425 DHRS1Q96LJ7 313 aa13.56□□□□□ -0.24
LIG1-205ENST00000593425 HOPXQ9BPY8 73 aaPredicted RBP13.56□□□□□ -0.24
LIG1-205ENST00000593425 KCTD14Q9BQ13 255 aaPredicted RBP13.56□□□□□ -0.24
LIG1-205ENST00000593425 SMURF1Q9HCE7 757 aa13.56□□□□□ -0.24
LIG1-205ENST00000593425 RPRD1BQ9NQG5 326 aaKnown RBP13.56□□□□□ -0.24
LIG1-205ENST00000593425 CYB5R1Q9UHQ9 305 aa13.56□□□□□ -0.24
LIG1-205ENST00000593425 FAM32AQ9Y421 112 aaKnown RBP13.56□□□□□ -0.24
LIG1-205ENST00000593425 CLPSL1A2RUU4 121 aa13.55□□□□□ -0.24
LIG1-205ENST00000593425 C5orf63A6NC05 138 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms