RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 POFUT1Q9H488 388 aa12.8□□□□□ -0.36
DDX39A-221ENST00000593026 NIPAL2Q9H841 368 aa12.8□□□□□ -0.36
DDX39A-221ENST00000593026 SLCO1C1Q9NYB5 712 aa12.8□□□□□ -0.36
DDX39A-221ENST00000593026 TAAR3PQ9P1P4 343 aa12.8□□□□□ -0.36
DDX39A-221ENST00000593026 LRP12Q9Y561 859 aa12.8□□□□□ -0.36
DDX39A-221ENST00000593026 CSMD1Q96PZ7 3565 aa12.8□□□□□ -0.36
DDX39A-221ENST00000593026 PSMD9O00233 223 aa12.79□□□□□ -0.36
DDX39A-221ENST00000593026 IGHV3-13P01766 116 aa12.79□□□□□ -0.36
DDX39A-221ENST00000593026 ANXA2P07355 339 aaKnown RBP12.79□□□□□ -0.36
DDX39A-221ENST00000593026 ADRA2AP08913 450 aa12.79□□□□□ -0.36
DDX39A-221ENST00000593026 SLC2A1P11166 492 aa12.79□□□□□ -0.36
DDX39A-221ENST00000593026 ALDH3B1P43353 468 aa12.79□□□□□ -0.36
DDX39A-221ENST00000593026 ROM1Q03395 351 aa12.79□□□□□ -0.36
DDX39A-221ENST00000593026 MOGQ16653 247 aa12.79□□□□□ -0.36
DDX39A-221ENST00000593026 DEGS2Q6QHC5 323 aa12.79□□□□□ -0.36
DDX39A-221ENST00000593026 ZNF322Q6U7Q0 402 aaPredicted RBP12.79□□□□□ -0.36
DDX39A-221ENST00000593026 FBXW12Q6X9E4 464 aa12.79□□□□□ -0.36
DDX39A-221ENST00000593026 ZNF679Q8IYX0 411 aa12.79□□□□□ -0.36
DDX39A-221ENST00000593026 C8orf59Q8N0T1 100 aaPredicted RBP12.79□□□□□ -0.36
DDX39A-221ENST00000593026 SNX33Q8WV41 574 aa12.79□□□□□ -0.36
DDX39A-221ENST00000593026 OR8B4Q96RC9 309 aa12.79□□□□□ -0.36
DDX39A-221ENST00000593026 SP140LQ9H930 580 aa12.79□□□□□ -0.36
DDX39A-221ENST00000593026 IKZF2Q9UKS7 526 aa12.79□□□□□ -0.36
DDX39A-221ENST00000593026 N6AMT1Q9Y5N5 214 aa12.79□□□□□ -0.36
DDX39A-221ENST00000593026 CREBBPQ92793 2442 aa12.78□□□□□ -0.36
DDX39A-221ENST00000593026 A0A1W2PQL4 384 aaPredicted RBP12.78□□□□□ -0.36
DDX39A-221ENST00000593026 PRR32B1ATL7 298 aa12.78□□□□□ -0.36
DDX39A-221ENST00000593026 TBX1O43435 398 aa12.78□□□□□ -0.36
DDX39A-221ENST00000593026 TIMM8AO60220 97 aaPredicted RBP12.78□□□□□ -0.36
DDX39A-221ENST00000593026 NDUFS7O75251 213 aa12.78□□□□□ -0.36
DDX39A-221ENST00000593026 ZNF254O75437 659 aa12.78□□□□□ -0.36
DDX39A-221ENST00000593026 WBP4O75554 376 aaKnown RBP12.78□□□□□ -0.36
DDX39A-221ENST00000593026 MT-ND5P03915 603 aa12.78□□□□□ -0.36
DDX39A-221ENST00000593026 ERCC1P07992 297 aaPredicted RBP12.78□□□□□ -0.36
DDX39A-221ENST00000593026 GNAO1P09471 354 aa12.78□□□□□ -0.36
DDX39A-221ENST00000593026 DBTP11182 482 aaKnown RBP12.78□□□□□ -0.36
DDX39A-221ENST00000593026 RAC2P15153 192 aa12.78□□□□□ -0.36
DDX39A-221ENST00000593026 ZNF121P58317 390 aaPredicted RBP12.78□□□□□ -0.36
DDX39A-221ENST00000593026 PSMA6P60900 246 aaKnown RBP12.78□□□□□ -0.36
DDX39A-221ENST00000593026 EGR3Q06889 387 aa12.78□□□□□ -0.36
DDX39A-221ENST00000593026 PSG7Q13046 419 aa12.78□□□□□ -0.36
DDX39A-221ENST00000593026 HLXQ14774 488 aaPredicted RBP12.78□□□□□ -0.36
DDX39A-221ENST00000593026 SNAI3Q3KNW1 292 aa12.78□□□□□ -0.36
DDX39A-221ENST00000593026 ALKBH6Q3KRA9 238 aa12.78□□□□□ -0.36
DDX39A-221ENST00000593026 C6orf52Q5T4I8 152 aa12.78□□□□□ -0.36
DDX39A-221ENST00000593026 CNIH3Q8TBE1 160 aa12.78□□□□□ -0.36
DDX39A-221ENST00000593026 TFAP2CQ92754 450 aa12.78□□□□□ -0.36
DDX39A-221ENST00000593026 HAVCR1Q96D42 359 aa12.78□□□□□ -0.36
DDX39A-221ENST00000593026 CMBLQ96DG6 245 aa12.78□□□□□ -0.36
DDX39A-221ENST00000593026 CXXC4Q9H2H0 198 aa12.78□□□□□ -0.36
DDX39A-221ENST00000593026 MS4A5Q9H3V2 200 aa12.78□□□□□ -0.36
DDX39A-221ENST00000593026 BARX1Q9HBU1 254 aaPredicted RBP12.78□□□□□ -0.36
DDX39A-221ENST00000593026 AMBNQ9NP70 447 aa12.78□□□□□ -0.36
DDX39A-221ENST00000593026 BRD7Q9NPI1 651 aa12.78□□□□□ -0.36
DDX39A-221ENST00000593026 RPL36Q9Y3U8 105 aaKnown RBP12.78□□□□□ -0.36
DDX39A-221ENST00000593026 PCDHGB1Q9Y5G3 927 aa12.78□□□□□ -0.36
DDX39A-221ENST00000593026 HSPE1-MOB4S4R3N1 261 aa12.78□□□□□ -0.36
DDX39A-221ENST00000593026 ARFGEF3Q5TH69 2177 aa12.77□□□□□ -0.36
DDX39A-221ENST00000593026 CCDC168Q8NDH2 2452 aa12.77□□□□□ -0.37
DDX39A-221ENST00000593026 PLSCR5A0PG75 271 aa12.77□□□□□ -0.37
DDX39A-221ENST00000593026 IGHV4-39P01824 125 aa12.77□□□□□ -0.37
DDX39A-221ENST00000593026 KITLGP21583 273 aa12.77□□□□□ -0.37
DDX39A-221ENST00000593026 RIDAP52758 137 aaKnown RBP12.77□□□□□ -0.37
DDX39A-221ENST00000593026 ISL1P61371 349 aa12.77□□□□□ -0.37
DDX39A-221ENST00000593026 ACTC1P68032 377 aa12.77□□□□□ -0.37
DDX39A-221ENST00000593026 ACTA1P68133 377 aa12.77□□□□□ -0.37
DDX39A-221ENST00000593026 SMN1Q16637 294 aaKnown RBP12.77□□□□□ -0.37
DDX39A-221ENST00000593026 TMEM255AQ5JRV8 349 aa12.77□□□□□ -0.37
DDX39A-221ENST00000593026 IZUMO2Q6UXV1 221 aa12.77□□□□□ -0.37
DDX39A-221ENST00000593026 FAM57BQ71RH2 274 aa12.77□□□□□ -0.37
DDX39A-221ENST00000593026 SSX6Q7RTT6 188 aa12.77□□□□□ -0.37
DDX39A-221ENST00000593026 MRPL21Q7Z2W9 205 aaKnown RBP12.77□□□□□ -0.37
DDX39A-221ENST00000593026 ZCCHC24Q8N2G6 241 aaKnown RBP12.77□□□□□ -0.37
DDX39A-221ENST00000593026 OR52H1Q8NGJ2 320 aa12.77□□□□□ -0.37
DDX39A-221ENST00000593026 LGALS12Q96DT0 336 aa12.77□□□□□ -0.37
DDX39A-221ENST00000593026 PGAM5Q96HS1 289 aa12.77□□□□□ -0.37
DDX39A-221ENST00000593026 SORCS2Q96PQ0 1159 aa12.77□□□□□ -0.37
DDX39A-221ENST00000593026 RAB1BQ9H0U4 201 aa12.77□□□□□ -0.37
DDX39A-221ENST00000593026 TPK1Q9H3S4 243 aa12.77□□□□□ -0.37
DDX39A-221ENST00000593026 CGGBP1Q9UFW8 167 aaPredicted RBP12.77□□□□□ -0.37
DDX39A-221ENST00000593026 PURGQ9UJV8 347 aaKnown RBP12.77□□□□□ -0.37
DDX39A-221ENST00000593026 USF3Q68DE3 2245 aa12.77□□□□□ -0.37
DDX39A-221ENST00000593026 DAPL1A0PJW8 107 aa12.76□□□□□ -0.37
DDX39A-221ENST00000593026 C5orf63A6NC05 138 aa12.76□□□□□ -0.37
DDX39A-221ENST00000593026 MAGEB4O15481 346 aaPredicted RBP12.76□□□□□ -0.37
DDX39A-221ENST00000593026 XRCC2O43543 280 aa12.76□□□□□ -0.37
DDX39A-221ENST00000593026 FADS2O95864 444 aaKnown RBP12.76□□□□□ -0.37
DDX39A-221ENST00000593026 KRT8P05787 483 aa12.76□□□□□ -0.37
DDX39A-221ENST00000593026 NAT2P11245 290 aa12.76□□□□□ -0.37
DDX39A-221ENST00000593026 SELEP16581 610 aa12.76□□□□□ -0.37
DDX39A-221ENST00000593026 ANOS1P23352 680 aa12.76□□□□□ -0.37
DDX39A-221ENST00000593026 DCTDP32321 178 aa12.76□□□□□ -0.37
DDX39A-221ENST00000593026 LIPAP38571 399 aa12.76□□□□□ -0.37
DDX39A-221ENST00000593026 VHLP40337 213 aa12.76□□□□□ -0.37
DDX39A-221ENST00000593026 HSPA13P48723 471 aa12.76□□□□□ -0.37
DDX39A-221ENST00000593026 MMP15P51511 669 aa12.76□□□□□ -0.37
DDX39A-221ENST00000593026 EFNA4P52798 201 aa12.76□□□□□ -0.37
DDX39A-221ENST00000593026 RAB40BQ12829 278 aa12.76□□□□□ -0.37
DDX39A-221ENST00000593026 GK2Q14410 553 aaPredicted RBP12.76□□□□□ -0.37
DDX39A-221ENST00000593026 ZNF829Q3KNS6 432 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms