RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 IRF3Q14653 427 aa10.38□□□□□ -0.75
APOC1-206ENST00000590334 ZNF829Q3KNS6 432 aaPredicted RBP10.38□□□□□ -0.75
APOC1-206ENST00000590334 TP53I3Q53FA7 332 aa10.38□□□□□ -0.75
APOC1-206ENST00000590334 ZNF787Q6DD87 383 aa10.38□□□□□ -0.75
APOC1-206ENST00000590334 FDX2Q6P4F2 183 aa10.38□□□□□ -0.75
APOC1-206ENST00000590334 PRSS48Q7RTY5 328 aa10.38□□□□□ -0.75
APOC1-206ENST00000590334 KLHL36Q8N4N3 616 aa10.38□□□□□ -0.75
APOC1-206ENST00000590334 YIPF7Q8N8F6 280 aa10.38□□□□□ -0.75
APOC1-206ENST00000590334 OR52H1Q8NGJ2 320 aa10.38□□□□□ -0.75
APOC1-206ENST00000590334 OR5L1Q8NGL2 311 aa10.38□□□□□ -0.75
APOC1-206ENST00000590334 OR1J1Q8NGS3 322 aa10.38□□□□□ -0.75
APOC1-206ENST00000590334 OR52N1Q8NH53 320 aa10.38□□□□□ -0.75
APOC1-206ENST00000590334 ABHD4Q8TB40 342 aa10.38□□□□□ -0.75
APOC1-206ENST00000590334 HAVCR2Q8TDQ0 301 aa10.38□□□□□ -0.75
APOC1-206ENST00000590334 NEUROG1Q92886 237 aa10.38□□□□□ -0.75
APOC1-206ENST00000590334 PELI1Q96FA3 418 aa10.38□□□□□ -0.75
APOC1-206ENST00000590334 MARS2Q96GW9 593 aaKnown RBP10.38□□□□□ -0.75
APOC1-206ENST00000590334 C4orf36Q96KX1 117 aa10.38□□□□□ -0.75
APOC1-206ENST00000590334 CLEC4MQ9H2X3 399 aaPredicted RBP10.38□□□□□ -0.75
APOC1-206ENST00000590334 MOB1AQ9H8S9 216 aa10.38□□□□□ -0.75
APOC1-206ENST00000590334 PLEKHF2Q9H8W4 249 aa10.38□□□□□ -0.75
APOC1-206ENST00000590334 ISG20L2Q9H9L3 353 aaKnown RBP10.38□□□□□ -0.75
APOC1-206ENST00000590334 ERVK-18Q9QC07 812 aa10.38□□□□□ -0.75
APOC1-206ENST00000590334 CLEC2DQ9UHP7 191 aa10.38□□□□□ -0.75
APOC1-206ENST00000590334 GNG8Q9UK08 70 aa10.38□□□□□ -0.75
APOC1-206ENST00000590334 STARD10Q9Y365 291 aa10.38□□□□□ -0.75
APOC1-206ENST00000590334 ATP23Q9Y6H3 246 aa10.38□□□□□ -0.75
APOC1-206ENST00000590334 R4GMQ9 66 aa10.38□□□□□ -0.75
APOC1-206ENST00000590334 CADP27708 2225 aa10.37□□□□□ -0.75
APOC1-206ENST00000590334 RTTNQ86VV8 2226 aa10.37□□□□□ -0.75
APOC1-206ENST00000590334 ASH1LQ9NR48 2969 aaKnown RBP10.37□□□□□ -0.75
APOC1-206ENST00000590334 J3QLW9 94 aa10.37□□□□□ -0.75
APOC1-206ENST00000590334 HS3ST1O14792 307 aa10.37□□□□□ -0.75
APOC1-206ENST00000590334 RGS10O43665 173 aa10.37□□□□□ -0.75
APOC1-206ENST00000590334 GPRIN2O60269 458 aa10.37□□□□□ -0.75
APOC1-206ENST00000590334 PNPP00491 289 aa10.37□□□□□ -0.75
APOC1-206ENST00000590334 LCATP04180 440 aa10.37□□□□□ -0.75
APOC1-206ENST00000590334 ZNF19P17023 458 aa10.37□□□□□ -0.75
APOC1-206ENST00000590334 ANOS1P23352 680 aa10.37□□□□□ -0.75
APOC1-206ENST00000590334 THBS4P35443 961 aa10.37□□□□□ -0.75
APOC1-206ENST00000590334 SLC6A9P48067 706 aa10.37□□□□□ -0.75
APOC1-206ENST00000590334 PPP1CBP62140 327 aa10.37□□□□□ -0.75
APOC1-206ENST00000590334 MFGE8Q08431 387 aaPredicted RBP10.37□□□□□ -0.75
APOC1-206ENST00000590334 SNAI3Q3KNW1 292 aa10.37□□□□□ -0.75
APOC1-206ENST00000590334 KCTD21Q4G0X4 260 aa10.37□□□□□ -0.75
APOC1-206ENST00000590334 MBNL2Q5VZF2 373 aaKnown RBP10.37□□□□□ -0.75
APOC1-206ENST00000590334 HIST2H2BCQ6DN03 193 aa10.37□□□□□ -0.75
APOC1-206ENST00000590334 ZNF544Q6NX49 715 aa10.37□□□□□ -0.75
APOC1-206ENST00000590334 FBXW12Q6X9E4 464 aa10.37□□□□□ -0.75
APOC1-206ENST00000590334 TMPRSS11AQ6ZMR5 421 aa10.37□□□□□ -0.75
APOC1-206ENST00000590334 FAM220AQ7Z4H9 259 aa10.37□□□□□ -0.75
APOC1-206ENST00000590334 NANOGP1Q8N7R0 232 aa10.37□□□□□ -0.75
APOC1-206ENST00000590334 AKAP1Q92667 903 aaKnown RBP eCLIP10.37□□□□□ -0.751e-13■□□□□ 8.2
APOC1-206ENST00000590334 RORBQ92753 470 aa10.37□□□□□ -0.75
APOC1-206ENST00000590334 FBXW5Q969U6 566 aa10.37□□□□□ -0.75
APOC1-206ENST00000590334 SPSB4Q96A44 273 aa10.37□□□□□ -0.75
APOC1-206ENST00000590334 DHRS9Q9BPW9 319 aa10.37□□□□□ -0.75
APOC1-206ENST00000590334 POFUT1Q9H488 388 aa10.37□□□□□ -0.75
APOC1-206ENST00000590334 G6PC2Q9NQR9 355 aa10.37□□□□□ -0.75
APOC1-206ENST00000590334 ACOXLQ9NUZ1 547 aa10.37□□□□□ -0.75
APOC1-206ENST00000590334 CHCHD3Q9NX63 227 aaKnown RBP10.37□□□□□ -0.75
APOC1-206ENST00000590334 CISD1Q9NZ45 108 aaKnown RBP10.37□□□□□ -0.75
APOC1-206ENST00000590334 ZNF319Q9P2F9 582 aa10.37□□□□□ -0.75
APOC1-206ENST00000590334 NUFIP1Q9UHK0 495 aaKnown RBP10.37□□□□□ -0.75
APOC1-206ENST00000590334 POU2F3Q9UKI9 436 aa10.37□□□□□ -0.75
APOC1-206ENST00000590334 SNX5Q9Y5X3 404 aa10.37□□□□□ -0.75
APOC1-206ENST00000590334 PKDREJQ9NTG1 2253 aa10.37□□□□□ -0.75
APOC1-206ENST00000590334 NBPF19A0A087WUL8 3843 aa10.37□□□□□ -0.75
APOC1-206ENST00000590334 A0A0U1RQV5 110 aa10.36□□□□□ -0.75
APOC1-206ENST00000590334 C5orf63A6NC05 138 aa10.36□□□□□ -0.75
APOC1-206ENST00000590334 LOC110117498-PIK3R3F6TDL0 507 aa10.36□□□□□ -0.75
APOC1-206ENST00000590334 XRCC2O43543 280 aa10.36□□□□□ -0.75
APOC1-206ENST00000590334 IGLV3-1P01715 115 aa10.36□□□□□ -0.75
APOC1-206ENST00000590334 MT-ND2P03891 347 aa10.36□□□□□ -0.75
APOC1-206ENST00000590334 MT-ND5P03915 603 aa10.36□□□□□ -0.75
APOC1-206ENST00000590334 LCKP06239 509 aa10.36□□□□□ -0.75
APOC1-206ENST00000590334 ANXA2P07355 339 aaKnown RBP10.36□□□□□ -0.75
APOC1-206ENST00000590334 SLC2A1P11166 492 aa10.36□□□□□ -0.75
APOC1-206ENST00000590334 APOBEC3AP31941 199 aaPredicted RBP10.36□□□□□ -0.75
APOC1-206ENST00000590334 TGM4P49221 684 aa10.36□□□□□ -0.75
APOC1-206ENST00000590334 EVX1P49640 407 aa10.36□□□□□ -0.75
APOC1-206ENST00000590334 CCR9P51686 369 aa10.36□□□□□ -0.75
APOC1-206ENST00000590334 CHN2P52757 468 aa10.36□□□□□ -0.75
APOC1-206ENST00000590334 ERVS71-1P61550 626 aa10.36□□□□□ -0.75
APOC1-206ENST00000590334 ADIPOQQ15848 244 aa10.36□□□□□ -0.75
APOC1-206ENST00000590334 MSMPQ1L6U9 139 aa10.36□□□□□ -0.75
APOC1-206ENST00000590334 OR2G6Q5TZ20 316 aa10.36□□□□□ -0.75
APOC1-206ENST00000590334 RGS7BPQ6MZT1 257 aaPredicted RBP10.36□□□□□ -0.75
APOC1-206ENST00000590334 FAM57BQ71RH2 274 aa10.36□□□□□ -0.75
APOC1-206ENST00000590334 CATSPERDQ86XM0 798 aa10.36□□□□□ -0.75
APOC1-206ENST00000590334 ZNF611Q8N823 705 aa10.36□□□□□ -0.75
APOC1-206ENST00000590334 SLC25A40Q8TBP6 338 aa10.36□□□□□ -0.75
APOC1-206ENST00000590334 RPS4Y2Q8TD47 263 aa10.36□□□□□ -0.75
APOC1-206ENST00000590334 SPRYD4Q8WW59 207 aaPredicted RBP10.36□□□□□ -0.75
APOC1-206ENST00000590334 MRPL24Q96A35 216 aaKnown RBP10.36□□□□□ -0.75
APOC1-206ENST00000590334 MND1Q9BWT6 205 aa10.36□□□□□ -0.75
APOC1-206ENST00000590334 OR2J1Q9GZK6 312 aa10.36□□□□□ -0.75
APOC1-206ENST00000590334 PBOV1Q9GZY1 135 aa10.36□□□□□ -0.75
APOC1-206ENST00000590334 OR51B6Q9H340 312 aa10.36□□□□□ -0.75
APOC1-206ENST00000590334 OPA3Q9H6K4 179 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms