RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 OR51D1Q8NGF3 324 aa8.82□□□□□ -1
VPS25-202ENST00000589219 OR5M1Q8NGP8 315 aa8.82□□□□□ -1
VPS25-202ENST00000589219 ZFAND1Q8TCF1 268 aa8.82□□□□□ -1
VPS25-202ENST00000589219 GIMAP1Q8WWP7 306 aa8.82□□□□□ -1
VPS25-202ENST00000589219 TMEM54Q969K7 222 aa8.82□□□□□ -1
VPS25-202ENST00000589219 INTS12Q96CB8 462 aaKnown RBP8.82□□□□□ -1
VPS25-202ENST00000589219 FYTTD1Q96QD9 318 aaKnown RBP8.82□□□□□ -1
VPS25-202ENST00000589219 UTP23Q9BRU9 249 aaKnown RBP8.82□□□□□ -1
VPS25-202ENST00000589219 PBOV1Q9GZY1 135 aa8.82□□□□□ -1
VPS25-202ENST00000589219 OR51J1Q9H342 316 aa8.82□□□□□ -1
VPS25-202ENST00000589219 TP63Q9H3D4 680 aaPredicted RBP8.82□□□□□ -1
VPS25-202ENST00000589219 SCPEP1Q9HB40 452 aa8.82□□□□□ -1
VPS25-202ENST00000589219 PROK2Q9HC23 129 aa8.82□□□□□ -1
VPS25-202ENST00000589219 LHFPL6Q9Y693 200 aa8.82□□□□□ -1
VPS25-202ENST00000589219 FLNBO75369 2602 aaKnown RBP8.82□□□□□ -1
VPS25-202ENST00000589219 CIB4A0PJX0 185 aa8.81□□□□□ -1
VPS25-202ENST00000589219 ZNF891A8MT65 544 aaPredicted RBP8.81□□□□□ -1
VPS25-202ENST00000589219 ZNF814B7Z6K7 855 aa8.81□□□□□ -1
VPS25-202ENST00000589219 NPIPA2E9PIF3 369 aa8.81□□□□□ -1
VPS25-202ENST00000589219 NPIPA3F8WFD2 350 aa8.81□□□□□ -1
VPS25-202ENST00000589219 H0YC42 278 aa8.81□□□□□ -1
VPS25-202ENST00000589219 H7C417 338 aa8.81□□□□□ -1
VPS25-202ENST00000589219 P2RY10O00398 339 aa8.81□□□□□ -1
VPS25-202ENST00000589219 EIF1AYO14602 144 aaKnown RBP8.81□□□□□ -1
VPS25-202ENST00000589219 SYT7O43581 403 aa8.81□□□□□ -1
VPS25-202ENST00000589219 RAD1O60671 282 aa8.81□□□□□ -1
VPS25-202ENST00000589219 RBBP9O75884 186 aa8.81□□□□□ -1
VPS25-202ENST00000589219 TGM6O95932 706 aa8.81□□□□□ -1
VPS25-202ENST00000589219 TTRP02766 147 aa8.81□□□□□ -1
VPS25-202ENST00000589219 PSMB1P20618 241 aaKnown RBP8.81□□□□□ -1
VPS25-202ENST00000589219 GUCA1AP43080 201 aaPredicted RBP8.81□□□□□ -1
VPS25-202ENST00000589219 EIF1AXP47813 144 aaKnown RBP8.81□□□□□ -1
VPS25-202ENST00000589219 CCR6P51684 374 aa8.81□□□□□ -1
VPS25-202ENST00000589219 SUCLG1P53597 346 aaKnown RBP8.81□□□□□ -1
VPS25-202ENST00000589219 CLDN17P56750 224 aa8.81□□□□□ -1
VPS25-202ENST00000589219 RPS15P62841 145 aaKnown RBP8.81□□□□□ -1
VPS25-202ENST00000589219 IFITM2Q01629 132 aa8.81□□□□□ -1
VPS25-202ENST00000589219 TAF13Q15543 124 aa8.81□□□□□ -1
VPS25-202ENST00000589219 GSG1Q2KHT4 349 aa8.81□□□□□ -1
VPS25-202ENST00000589219 METTL11BQ5VVY1 283 aa8.81□□□□□ -1
VPS25-202ENST00000589219 H3F3CQ6NXT2 135 aa8.81□□□□□ -1
VPS25-202ENST00000589219 JMJD6Q6NYC1 403 aaPredicted RBP8.81□□□□□ -1
VPS25-202ENST00000589219 CFAP77Q6ZQR2 320 aa8.81□□□□□ -1
VPS25-202ENST00000589219 LUZP2Q86TE4 346 aa8.81□□□□□ -1
VPS25-202ENST00000589219 ESX1Q8N693 406 aa8.81□□□□□ -1
VPS25-202ENST00000589219 ASCC1Q8N9N2 400 aaKnown RBP8.81□□□□□ -1
VPS25-202ENST00000589219 PLPP7Q8NBV4 271 aa8.81□□□□□ -1
VPS25-202ENST00000589219 CCDC54Q8NEL0 328 aa8.81□□□□□ -1
VPS25-202ENST00000589219 ITFG2Q969R8 447 aa8.81□□□□□ -1
VPS25-202ENST00000589219 SLC25A28Q96A46 364 aa8.81□□□□□ -1
VPS25-202ENST00000589219 SORCS2Q96PQ0 1159 aa8.81□□□□□ -1
VPS25-202ENST00000589219 UQCC2Q9BRT2 126 aa8.81□□□□□ -1
VPS25-202ENST00000589219 SF3B5Q9BWJ5 86 aaKnown RBP8.81□□□□□ -1
VPS25-202ENST00000589219 SEC61A2Q9H9S3 476 aa8.81□□□□□ -1
VPS25-202ENST00000589219 GLTPQ9NZD2 209 aa8.81□□□□□ -1
VPS25-202ENST00000589219 MTFP1Q9UDX5 166 aa8.81□□□□□ -1
VPS25-202ENST00000589219 ZNF107Q9UII5 783 aaPredicted RBP8.81□□□□□ -1
VPS25-202ENST00000589219 MRPS18CQ9Y3D5 142 aaKnown RBP8.81□□□□□ -1
VPS25-202ENST00000589219 C21orf140B9A014 251 aa8.8□□□□□ -1
VPS25-202ENST00000589219 H3BSH0 61 aa8.8□□□□□ -1
VPS25-202ENST00000589219 LDLRAD4O15165 306 aa8.8□□□□□ -1
VPS25-202ENST00000589219 BPNT1O95861 308 aa8.8□□□□□ -1
VPS25-202ENST00000589219 QDPRP09417 244 aa8.8□□□□□ -1
VPS25-202ENST00000589219 TMIGD3P0DMS9 266 aaPredicted RBP8.8□□□□□ -1
VPS25-202ENST00000589219 ZNF20P17024 532 aa8.8□□□□□ -1
VPS25-202ENST00000589219 WT1P19544 449 aaPredicted RBP8.8□□□□□ -1
VPS25-202ENST00000589219 TCN2P20062 427 aa8.8□□□□□ -1
VPS25-202ENST00000589219 MSR1P21757 451 aa8.8□□□□□ -1
VPS25-202ENST00000589219 CCL1P22362 96 aa8.8□□□□□ -1
VPS25-202ENST00000589219 BDKRB2P30411 391 aa8.8□□□□□ -1
VPS25-202ENST00000589219 PRSS3P35030 304 aa8.8□□□□□ -1
VPS25-202ENST00000589219 MECP2P51608 486 aaKnown RBP8.8□□□□□ -1
VPS25-202ENST00000589219 FOXK1P85037 733 aa8.8□□□□□ -1
VPS25-202ENST00000589219 FAPQ12884 760 aa8.8□□□□□ -1
VPS25-202ENST00000589219 TNK1Q13470 666 aa8.8□□□□□ -1
VPS25-202ENST00000589219 FCN2Q15485 313 aa8.8□□□□□ -1
VPS25-202ENST00000589219 C2orf76Q3KRA6 126 aa8.8□□□□□ -1
VPS25-202ENST00000589219 CARD17Q5XLA6 110 aa8.8□□□□□ -1
VPS25-202ENST00000589219 RAB12Q6IQ22 244 aa8.8□□□□□ -1
VPS25-202ENST00000589219 SLC25A25Q6KCM7 469 aa8.8□□□□□ -1
VPS25-202ENST00000589219 CORO6Q6QEF8 472 aa8.8□□□□□ -1
VPS25-202ENST00000589219 CREB3L2Q70SY1 520 aa8.8□□□□□ -1
VPS25-202ENST00000589219 CDH26Q8IXH8 852 aa8.8□□□□□ -1
VPS25-202ENST00000589219 BEST3Q8N1M1 668 aa8.8□□□□□ -1
VPS25-202ENST00000589219 SLC22A24Q8N4F4 322 aa8.8□□□□□ -1
VPS25-202ENST00000589219 OR1M1Q8NGA1 313 aa8.8□□□□□ -1
VPS25-202ENST00000589219 OR9K2Q8NGE7 335 aa8.8□□□□□ -1
VPS25-202ENST00000589219 OR10S1Q8NGN2 331 aa8.8□□□□□ -1
VPS25-202ENST00000589219 OR6N1Q8NGY5 312 aa8.8□□□□□ -1
VPS25-202ENST00000589219 GCDHQ92947 438 aaPredicted RBP8.8□□□□□ -1
VPS25-202ENST00000589219 HYLS1Q96M11 299 aa8.8□□□□□ -1
VPS25-202ENST00000589219 JSRP1Q96MG2 331 aaPredicted RBP8.8□□□□□ -1
VPS25-202ENST00000589219 NUDT16L1Q9BRJ7 211 aaKnown RBP8.8□□□□□ -1
VPS25-202ENST00000589219 GON7Q9BXV9 100 aa8.8□□□□□ -1
VPS25-202ENST00000589219 BEX2Q9BXY8 128 aa8.8□□□□□ -1
VPS25-202ENST00000589219 SLCO5A1Q9H2Y9 848 aa8.8□□□□□ -1
VPS25-202ENST00000589219 NELFAQ9H3P2 528 aa8.8□□□□□ -1
VPS25-202ENST00000589219 METTL17Q9H7H0 456 aaPredicted RBP8.8□□□□□ -1
VPS25-202ENST00000589219 GPN1Q9HCN4 374 aaPredicted RBP8.8□□□□□ -1
VPS25-202ENST00000589219 PAQR5Q9NXK6 330 aaPredicted RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms