RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 WDR5BQ86VZ2 330 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 COMMD2Q86X83 199 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 LINC00346Q8IVM7 164 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 CCDC36Q8IYA8 594 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 BEST3Q8N1M1 668 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 FADS6Q8N9I5 356 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 OR56B1Q8NGI3 324 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 OR8S1Q8NH09 359 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 M1APQ8TC57 530 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 AQP3Q92482 292 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 FGGYQ96C11 551 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 ZNF524Q96C55 264 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 ARL5BQ96KC2 179 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 CCDC74BQ96LY2 380 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 SFXN2Q96NB2 322 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 CNTNAP3BQ96NU0 1288 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 FOXN4Q96NZ1 517 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 OR5B2Q96R09 309 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 PHB2Q99623 299 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 EDEM2Q9BV94 578 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 MRPL13Q9BYD1 178 aaKnown RBP6.38□□□□□ -1.39
SPIDR-228ENST00000588781 CNTNAP3Q9BZ76 1288 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 ARL6Q9H0F7 186 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 FXYD6Q9H0Q3 95 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 CST11Q9H112 138 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 POFUT1Q9H488 388 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 SEC61A2Q9H9S3 476 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 CGGBP1Q9UFW8 167 aaPredicted RBP6.38□□□□□ -1.39
SPIDR-228ENST00000588781 GLS2Q9UI32 602 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 SIT1Q9Y3P8 196 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 B3GALT1Q9Y5Z6 326 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 USP24Q9UPU5 2620 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 IGHV3-20A0A0C4DH32 117 aa6.37□□□□□ -1.39
SPIDR-228ENST00000588781 KANTRA0A1W2PQU2 76 aa6.37□□□□□ -1.39
SPIDR-228ENST00000588781 B8ZZF3 427 aa6.37□□□□□ -1.39
SPIDR-228ENST00000588781 KRBOX1C9JBD0 128 aa6.37□□□□□ -1.39
SPIDR-228ENST00000588781 H3BML4 177 aa6.37□□□□□ -1.39
SPIDR-228ENST00000588781 K7ESF4 209 aa6.37□□□□□ -1.39
SPIDR-228ENST00000588781 MEN1O00255 615 aa6.37□□□□□ -1.39
SPIDR-228ENST00000588781 ADAM10O14672 748 aa6.37□□□□□ -1.39
SPIDR-228ENST00000588781 RAD1O60671 282 aa6.37□□□□□ -1.39
SPIDR-228ENST00000588781 OR2J2O76002 312 aa6.37□□□□□ -1.39
SPIDR-228ENST00000588781 CER1O95813 267 aa6.37□□□□□ -1.39
SPIDR-228ENST00000588781 CD8AP01732 235 aa6.37□□□□□ -1.39
SPIDR-228ENST00000588781 TTRP02766 147 aa6.37□□□□□ -1.39
SPIDR-228ENST00000588781 FCER2P06734 321 aa6.37□□□□□ -1.39
SPIDR-228ENST00000588781 SLC25A4P12235 298 aa6.37□□□□□ -1.39
SPIDR-228ENST00000588781 HLA-DOBP13765 273 aa6.37□□□□□ -1.39
SPIDR-228ENST00000588781 MGMTP16455 207 aa6.37□□□□□ -1.39
SPIDR-228ENST00000588781 HLA-GP17693 338 aa6.37□□□□□ -1.39
SPIDR-228ENST00000588781 MSR1P21757 451 aa6.37□□□□□ -1.39
SPIDR-228ENST00000588781 CCL1P22362 96 aa6.37□□□□□ -1.39
SPIDR-228ENST00000588781 CTSSP25774 331 aa6.37□□□□□ -1.39
SPIDR-228ENST00000588781 THBS4P35443 961 aa6.37□□□□□ -1.39
SPIDR-228ENST00000588781 ZNF93P35789 620 aaPredicted RBP6.37□□□□□ -1.39
SPIDR-228ENST00000588781 NUP62P37198 522 aaPredicted RBP6.37□□□□□ -1.39
SPIDR-228ENST00000588781 CSNK1A1P48729 337 aa6.37□□□□□ -1.39
SPIDR-228ENST00000588781 SSR4P51571 173 aa6.37□□□□□ -1.39
SPIDR-228ENST00000588781 EFNA3P52797 238 aa6.37□□□□□ -1.39
SPIDR-228ENST00000588781 DSCR4P56555 118 aaPredicted RBP6.37□□□□□ -1.39
SPIDR-228ENST00000588781 CLDN6P56747 220 aa6.37□□□□□ -1.39
SPIDR-228ENST00000588781 GUCA2AQ02747 115 aa6.37□□□□□ -1.39
SPIDR-228ENST00000588781 FMODQ06828 376 aa6.37□□□□□ -1.39
SPIDR-228ENST00000588781 SIGLEC14Q08ET2 396 aa6.37□□□□□ -1.39
SPIDR-228ENST00000588781 ZNF345Q14585 488 aa6.37□□□□□ -1.39
SPIDR-228ENST00000588781 HLXQ14774 488 aaPredicted RBP6.37□□□□□ -1.39
SPIDR-228ENST00000588781 POU4F3Q15319 338 aa6.37□□□□□ -1.39
SPIDR-228ENST00000588781 SHBQ15464 509 aa6.37□□□□□ -1.39
SPIDR-228ENST00000588781 AANATQ16613 207 aa6.37□□□□□ -1.39
SPIDR-228ENST00000588781 ZNF260Q3ZCT1 412 aa6.37□□□□□ -1.39
SPIDR-228ENST00000588781 PLEKHN1Q494U1 663 aaPredicted RBP6.37□□□□□ -1.39
SPIDR-228ENST00000588781 CDNFQ49AH0 187 aa6.37□□□□□ -1.39
SPIDR-228ENST00000588781 TOR2AQ5JU69 321 aa6.37□□□□□ -1.39
SPIDR-228ENST00000588781 ZNF385CQ66K41 422 aaPredicted RBP6.37□□□□□ -1.39
SPIDR-228ENST00000588781 AWAT2Q6E213 333 aa6.37□□□□□ -1.39
SPIDR-228ENST00000588781 OR5M10Q6IEU7 315 aa6.37□□□□□ -1.39
SPIDR-228ENST00000588781 FAAP20Q6NZ36 180 aa6.37□□□□□ -1.39
SPIDR-228ENST00000588781 ZNF529Q6P280 563 aa6.37□□□□□ -1.39
SPIDR-228ENST00000588781 GUSBP11Q6P575 273 aa6.37□□□□□ -1.39
SPIDR-228ENST00000588781 LYPD8Q6UX82 237 aa6.37□□□□□ -1.39
SPIDR-228ENST00000588781 ZNF813Q6ZN06 617 aa6.37□□□□□ -1.39
SPIDR-228ENST00000588781 TMPPEQ6ZT21 453 aa6.37□□□□□ -1.39
SPIDR-228ENST00000588781 LYG2Q86SG7 212 aa6.37□□□□□ -1.39
SPIDR-228ENST00000588781 SLC25A42Q86VD7 318 aa6.37□□□□□ -1.39
SPIDR-228ENST00000588781 FJX1Q86VR8 437 aa6.37□□□□□ -1.39
SPIDR-228ENST00000588781 PDZD9Q8IXQ8 264 aa6.37□□□□□ -1.39
SPIDR-228ENST00000588781 ZNF101Q8IZC7 436 aa6.37□□□□□ -1.39
SPIDR-228ENST00000588781 MUC20Q8N307 709 aaPredicted RBP6.37□□□□□ -1.39
SPIDR-228ENST00000588781 GTPBP8Q8N3Z3 284 aaPredicted RBP6.37□□□□□ -1.39
SPIDR-228ENST00000588781 ARRDC1Q8N5I2 433 aa6.37□□□□□ -1.39
SPIDR-228ENST00000588781 ZNF283Q8N7M2 679 aa6.37□□□□□ -1.39
SPIDR-228ENST00000588781 AGBL5Q8NDL9 886 aa6.37□□□□□ -1.39
SPIDR-228ENST00000588781 GJC3Q8NFK1 279 aa6.37□□□□□ -1.39
SPIDR-228ENST00000588781 STEAP2Q8NFT2 490 aa6.37□□□□□ -1.39
SPIDR-228ENST00000588781 OR5M8Q8NGP6 311 aa6.37□□□□□ -1.39
SPIDR-228ENST00000588781 OR10R2Q8NGX6 335 aa6.37□□□□□ -1.39
SPIDR-228ENST00000588781 OR6K3Q8NGY3 331 aa6.37□□□□□ -1.39
SPIDR-228ENST00000588781 THAP3Q8WTV1 239 aaPredicted RBP6.37□□□□□ -1.39
SPIDR-228ENST00000588781 PP6455Q8WZ26 134 aa6.37□□□□□ -1.39
SPIDR-228ENST00000588781 PHYHIPLQ96FC7 376 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms