RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 MYEF2Q9P2K5 600 aaKnown RBP11.8□□□□□ -0.52
PRKCSH-202ENST00000585540 VWC2LB2RUY7 222 aa11.79□□□□□ -0.52
PRKCSH-202ENST00000585540 E9PQ18 207 aa11.79□□□□□ -0.52
PRKCSH-202ENST00000585540 F5H5K5 113 aa11.79□□□□□ -0.52
PRKCSH-202ENST00000585540 HEXAP06865 529 aa11.79□□□□□ -0.52
PRKCSH-202ENST00000585540 DBHP09172 617 aa11.79□□□□□ -0.52
PRKCSH-202ENST00000585540 TNFRSF1AP19438 455 aa11.79□□□□□ -0.52
PRKCSH-202ENST00000585540 MPV17P39210 176 aa11.79□□□□□ -0.52
PRKCSH-202ENST00000585540 DDOSTP39656 456 aa11.79□□□□□ -0.52
PRKCSH-202ENST00000585540 RPS27P42677 84 aaKnown RBP11.79□□□□□ -0.52
PRKCSH-202ENST00000585540 SLC6A9P48067 706 aa11.79□□□□□ -0.52
PRKCSH-202ENST00000585540 EFNB1P98172 346 aa11.79□□□□□ -0.52
PRKCSH-202ENST00000585540 APOFQ13790 326 aa11.79□□□□□ -0.52
PRKCSH-202ENST00000585540 OGFRL1Q5TC84 451 aaPredicted RBP11.79□□□□□ -0.52
PRKCSH-202ENST00000585540 MEPCEQ7L2J0 689 aaKnown RBP11.79□□□□□ -0.52
PRKCSH-202ENST00000585540 TCEANCQ8N8B7 351 aa11.79□□□□□ -0.52
PRKCSH-202ENST00000585540 OR52H1Q8NGJ2 320 aa11.79□□□□□ -0.52
PRKCSH-202ENST00000585540 CMBLQ96DG6 245 aa11.79□□□□□ -0.52
PRKCSH-202ENST00000585540 HRASLS5Q96KN8 279 aa11.79□□□□□ -0.52
PRKCSH-202ENST00000585540 MYCBPQ99417 103 aaPredicted RBP11.79□□□□□ -0.52
PRKCSH-202ENST00000585540 TEAD3Q99594 435 aa11.79□□□□□ -0.52
PRKCSH-202ENST00000585540 ABHD6Q9BV23 337 aa11.79□□□□□ -0.52
PRKCSH-202ENST00000585540 SAP30LQ9HAJ7 183 aa11.79□□□□□ -0.52
PRKCSH-202ENST00000585540 RNPEPL1Q9HAU8 725 aa11.79□□□□□ -0.52
PRKCSH-202ENST00000585540 WARS2Q9UGM6 360 aaKnown RBP11.79□□□□□ -0.52
PRKCSH-202ENST00000585540 FZR1Q9UM11 496 aa11.79□□□□□ -0.52
PRKCSH-202ENST00000585540 STARD10Q9Y365 291 aa11.79□□□□□ -0.52
PRKCSH-202ENST00000585540 CHD3Q12873 2000 aaKnown RBP11.79□□□□□ -0.52
PRKCSH-202ENST00000585540 AKAP9Q99996 3911 aa11.78□□□□□ -0.52
PRKCSH-202ENST00000585540 IGHV4-30-2A0A087WSY4 118 aa11.78□□□□□ -0.52
PRKCSH-202ENST00000585540 CCDC182A6NF36 153 aa11.78□□□□□ -0.52
PRKCSH-202ENST00000585540 ACOD1A6NK06 481 aa11.78□□□□□ -0.52
PRKCSH-202ENST00000585540 DLGAP1O14490 977 aa11.78□□□□□ -0.52
PRKCSH-202ENST00000585540 TLX2O43763 284 aaPredicted RBP11.78□□□□□ -0.52
PRKCSH-202ENST00000585540 MPZL2O60487 215 aa11.78□□□□□ -0.52
PRKCSH-202ENST00000585540 ZNF254O75437 659 aa11.78□□□□□ -0.52
PRKCSH-202ENST00000585540 LCATP04180 440 aa11.78□□□□□ -0.52
PRKCSH-202ENST00000585540 USF1P22415 310 aaPredicted RBP11.78□□□□□ -0.52
PRKCSH-202ENST00000585540 NR4A2P43354 598 aa11.78□□□□□ -0.52
PRKCSH-202ENST00000585540 SLC34A1Q06495 639 aa11.78□□□□□ -0.52
PRKCSH-202ENST00000585540 CDK5R2Q13319 367 aa11.78□□□□□ -0.52
PRKCSH-202ENST00000585540 MAD2L1BPQ15013 274 aaPredicted RBP11.78□□□□□ -0.52
PRKCSH-202ENST00000585540 SPATA46Q5T0L3 261 aa11.78□□□□□ -0.52
PRKCSH-202ENST00000585540 AADACL4Q5VUY2 407 aa11.78□□□□□ -0.52
PRKCSH-202ENST00000585540 MEDAGQ5VYS4 303 aa11.78□□□□□ -0.52
PRKCSH-202ENST00000585540 MRPL21Q7Z2W9 205 aaKnown RBP11.78□□□□□ -0.52
PRKCSH-202ENST00000585540 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.78□□□□□ -0.52
PRKCSH-202ENST00000585540 ZNF283Q8N7M2 679 aa11.78□□□□□ -0.52
PRKCSH-202ENST00000585540 OR8G5Q8NG78 346 aa11.78□□□□□ -0.52
PRKCSH-202ENST00000585540 OR10S1Q8NGN2 331 aa11.78□□□□□ -0.52
PRKCSH-202ENST00000585540 OR13G1Q8NGZ3 307 aa11.78□□□□□ -0.52
PRKCSH-202ENST00000585540 FAM81AQ8TBF8 368 aa11.78□□□□□ -0.52
PRKCSH-202ENST00000585540 SLC7A6Q92536 515 aa11.78□□□□□ -0.52
PRKCSH-202ENST00000585540 HPS1Q92902 700 aa11.78□□□□□ -0.52
PRKCSH-202ENST00000585540 ZMYND19Q96E35 227 aaPredicted RBP11.78□□□□□ -0.52
PRKCSH-202ENST00000585540 ZNF582Q96NG8 517 aaPredicted RBP11.78□□□□□ -0.52
PRKCSH-202ENST00000585540 IL4I1Q96RQ9 567 aa11.78□□□□□ -0.52
PRKCSH-202ENST00000585540 CNN2Q99439 309 aaKnown RBP11.78□□□□□ -0.52
PRKCSH-202ENST00000585540 TPK1Q9H3S4 243 aa11.78□□□□□ -0.52
PRKCSH-202ENST00000585540 CENPMQ9NSP4 180 aa11.78□□□□□ -0.52
PRKCSH-202ENST00000585540 SMPD3Q9NY59 655 aaPredicted RBP11.78□□□□□ -0.52
PRKCSH-202ENST00000585540 IL19Q9UHD0 177 aa11.78□□□□□ -0.52
PRKCSH-202ENST00000585540 LAMP5Q9UJQ1 280 aa11.78□□□□□ -0.52
PRKCSH-202ENST00000585540 A0A096LNT2 108 aa11.77□□□□□ -0.53
PRKCSH-202ENST00000585540 RNF223E7ERA6 249 aa11.77□□□□□ -0.53
PRKCSH-202ENST00000585540 IGHV1-46P01743 117 aa11.77□□□□□ -0.53
PRKCSH-202ENST00000585540 TACSTD2P09758 323 aa11.77□□□□□ -0.53
PRKCSH-202ENST00000585540 H2BFMP0C1H6 154 aa11.77□□□□□ -0.53
PRKCSH-202ENST00000585540 NAT2P11245 290 aa11.77□□□□□ -0.53
PRKCSH-202ENST00000585540 ALOX5APP20292 161 aa11.77□□□□□ -0.53
PRKCSH-202ENST00000585540 OPRL1P41146 370 aa11.77□□□□□ -0.53
PRKCSH-202ENST00000585540 CRYBB2P43320 205 aa11.77□□□□□ -0.53
PRKCSH-202ENST00000585540 CHN2P52757 468 aa11.77□□□□□ -0.53
PRKCSH-202ENST00000585540 MZT1Q08AG7 82 aa11.77□□□□□ -0.53
PRKCSH-202ENST00000585540 RIN1Q13671 783 aa11.77□□□□□ -0.53
PRKCSH-202ENST00000585540 RSPO1Q2MKA7 263 aaPredicted RBP11.77□□□□□ -0.53
PRKCSH-202ENST00000585540 SLC25A30Q5SVS4 291 aa11.77□□□□□ -0.53
PRKCSH-202ENST00000585540 CLEC9AQ6UXN8 241 aa11.77□□□□□ -0.53
PRKCSH-202ENST00000585540 PGAP1Q75T13 922 aa11.77□□□□□ -0.53
PRKCSH-202ENST00000585540 KLBQ86Z14 1044 aa11.77□□□□□ -0.53
PRKCSH-202ENST00000585540 FTMTQ8N4E7 242 aa11.77□□□□□ -0.53
PRKCSH-202ENST00000585540 PACRGLQ8N7B6 248 aa11.77□□□□□ -0.53
PRKCSH-202ENST00000585540 CELF2-AS1Q8N7Q2 184 aa11.77□□□□□ -0.53
PRKCSH-202ENST00000585540 NRG4Q8WWG1 115 aa11.77□□□□□ -0.53
PRKCSH-202ENST00000585540 ERGIC1Q969X5 290 aa11.77□□□□□ -0.53
PRKCSH-202ENST00000585540 IMPAD1Q9NX62 359 aa11.77□□□□□ -0.53
PRKCSH-202ENST00000585540 PTTG3PQ9NZH4 202 aa11.77□□□□□ -0.53
PRKCSH-202ENST00000585540 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.77□□□□□ -0.53
PRKCSH-202ENST00000585540 HIVEP1P15822 2718 aa11.76□□□□□ -0.53
PRKCSH-202ENST00000585540 IGHV1-69-2A0A0G2JMI3 117 aa11.76□□□□□ -0.53
PRKCSH-202ENST00000585540 A0A1B0GWJ7 208 aa11.76□□□□□ -0.53
PRKCSH-202ENST00000585540 TPD52L2O43399 206 aaKnown RBP11.76□□□□□ -0.53
PRKCSH-202ENST00000585540 RRP9O43818 475 aaKnown RBP11.76□□□□□ -0.53
PRKCSH-202ENST00000585540 SELENOFO60613 162 aa11.76□□□□□ -0.53
PRKCSH-202ENST00000585540 HTR1FP30939 366 aa11.76□□□□□ -0.53
PRKCSH-202ENST00000585540 GPR6P46095 362 aaPredicted RBP11.76□□□□□ -0.53
PRKCSH-202ENST00000585540 CX3CR1P49238 355 aa11.76□□□□□ -0.53
PRKCSH-202ENST00000585540 GZMKP49863 264 aa11.76□□□□□ -0.53
PRKCSH-202ENST00000585540 PSMA6P60900 246 aaKnown RBP11.76□□□□□ -0.53
PRKCSH-202ENST00000585540 ROM1Q03395 351 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms