RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 MS4A7Q9GZW8 240 aaPredicted RBP17.12■□□□□ 0.33
TOP3A-219ENST00000584887 TMEM165Q9HC07 324 aa17.12■□□□□ 0.33
TOP3A-219ENST00000584887 MIOXQ9UGB7 285 aa17.12■□□□□ 0.33
TOP3A-219ENST00000584887 SPRY1O43609 319 aaPredicted RBP17.11■□□□□ 0.33
TOP3A-219ENST00000584887 IDH3BO43837 385 aa17.11■□□□□ 0.33
TOP3A-219ENST00000584887 ZNF823P16415 610 aa17.11■□□□□ 0.33
TOP3A-219ENST00000584887 CD80P33681 288 aa17.11■□□□□ 0.33
TOP3A-219ENST00000584887 GSSP48637 474 aa17.11■□□□□ 0.33
TOP3A-219ENST00000584887 MXRA7P84157 204 aa17.11■□□□□ 0.33
TOP3A-219ENST00000584887 BAMBIQ13145 260 aa17.11■□□□□ 0.33
TOP3A-219ENST00000584887 GK2Q14410 553 aaPredicted RBP17.11■□□□□ 0.33
TOP3A-219ENST00000584887 COLCA1Q6ZS62 124 aa17.11■□□□□ 0.33
TOP3A-219ENST00000584887 NLRC3Q7RTR2 1065 aa17.11■□□□□ 0.33
TOP3A-219ENST00000584887 MRPL21Q7Z2W9 205 aaKnown RBP17.11■□□□□ 0.33
TOP3A-219ENST00000584887 NAA40Q86UY6 237 aa17.11■□□□□ 0.33
TOP3A-219ENST00000584887 ZBTB46Q86UZ6 589 aa17.11■□□□□ 0.33
TOP3A-219ENST00000584887 ZDHHC21Q8IVQ6 265 aa17.11■□□□□ 0.33
TOP3A-219ENST00000584887 CYB561A3Q8NBI2 242 aa17.11■□□□□ 0.33
TOP3A-219ENST00000584887 PROKR2Q8NFJ6 384 aa17.11■□□□□ 0.33
TOP3A-219ENST00000584887 OR8B3Q8NGG8 313 aa17.11■□□□□ 0.33
TOP3A-219ENST00000584887 OR11L1Q8NGX0 322 aa17.11■□□□□ 0.33
TOP3A-219ENST00000584887 SLCO4A1Q96BD0 722 aa17.11■□□□□ 0.33
TOP3A-219ENST00000584887 NEIL1Q96FI4 390 aaPredicted RBP17.11■□□□□ 0.33
TOP3A-219ENST00000584887 OR8B2Q96RD0 313 aa17.11■□□□□ 0.33
TOP3A-219ENST00000584887 EGLN3Q9H6Z9 239 aa17.11■□□□□ 0.33
TOP3A-219ENST00000584887 UFSP2Q9NUQ7 469 aa17.11■□□□□ 0.33
TOP3A-219ENST00000584887 CYB5R1Q9UHQ9 305 aa17.11■□□□□ 0.33
TOP3A-219ENST00000584887 DOCK11Q5JSL3 2073 aa17.1■□□□□ 0.33
TOP3A-219ENST00000584887 GGT2P36268 569 aa17.1■□□□□ 0.33
TOP3A-219ENST00000584887 PMELP40967 661 aa17.1■□□□□ 0.33
TOP3A-219ENST00000584887 RPS27P42677 84 aaKnown RBP17.1■□□□□ 0.33
TOP3A-219ENST00000584887 PITPNBP48739 271 aa17.1■□□□□ 0.33
TOP3A-219ENST00000584887 TPTEP56180 551 aa17.1■□□□□ 0.33
TOP3A-219ENST00000584887 TSPAN31Q12999 210 aa17.1■□□□□ 0.33
TOP3A-219ENST00000584887 KRTAP27-1Q3LI81 207 aa17.1■□□□□ 0.33
TOP3A-219ENST00000584887 PGBD2Q6P3X8 592 aa17.1■□□□□ 0.33
TOP3A-219ENST00000584887 PGAP1Q75T13 922 aa17.1■□□□□ 0.33
TOP3A-219ENST00000584887 C19orf18Q8NEA5 215 aa17.1■□□□□ 0.33
TOP3A-219ENST00000584887 PNRC2Q9NPJ4 139 aaKnown RBP17.1■□□□□ 0.33
TOP3A-219ENST00000584887 MRPL22Q9NWU5 206 aaKnown RBP17.1■□□□□ 0.33
TOP3A-219ENST00000584887 TAGLN3Q9UI15 199 aa17.1■□□□□ 0.33
TOP3A-219ENST00000584887 PCDHGB1Q9Y5G3 927 aa17.1■□□□□ 0.33
TOP3A-219ENST00000584887 CDH10Q9Y6N8 788 aa17.1■□□□□ 0.33
TOP3A-219ENST00000584887 IGHV2-70DA0A0C4DH43 119 aa17.09■□□□□ 0.33
TOP3A-219ENST00000584887 TVP23AA6NH52 213 aa17.09■□□□□ 0.33
TOP3A-219ENST00000584887 M0R135 149 aa17.09■□□□□ 0.33
TOP3A-219ENST00000584887 IGHV4-38-2P0DP08 117 aa17.09■□□□□ 0.33
TOP3A-219ENST00000584887 PRTN3P24158 256 aa17.09■□□□□ 0.33
TOP3A-219ENST00000584887 PAX8Q06710 450 aa17.09■□□□□ 0.33
TOP3A-219ENST00000584887 ZNF404Q494X3 552 aa17.09■□□□□ 0.33
TOP3A-219ENST00000584887 PRAMEF6Q5VXH4 476 aa17.09■□□□□ 0.33
TOP3A-219ENST00000584887 LRRN1Q6UXK5 716 aa17.09■□□□□ 0.33
TOP3A-219ENST00000584887 DEFB107AQ8IZN7 70 aa17.09■□□□□ 0.33
TOP3A-219ENST00000584887 PARP8Q8N3A8 854 aa17.09■□□□□ 0.33
TOP3A-219ENST00000584887 BOLLQ8N9W6 283 aaKnown RBP17.09■□□□□ 0.33
TOP3A-219ENST00000584887 OR9Q2Q8NGE9 314 aa17.09■□□□□ 0.33
TOP3A-219ENST00000584887 SGMS2Q8NHU3 365 aa17.09■□□□□ 0.33
TOP3A-219ENST00000584887 SPTSSAQ969W0 71 aa17.09■□□□□ 0.33
TOP3A-219ENST00000584887 ZNF799Q96GE5 643 aa17.09■□□□□ 0.33
TOP3A-219ENST00000584887 MAP6Q96JE9 813 aa17.09■□□□□ 0.33
TOP3A-219ENST00000584887 ZNF48Q96MX3 618 aaPredicted RBP17.09■□□□□ 0.33
TOP3A-219ENST00000584887 IL1RAPQ9NPH3 570 aa17.09■□□□□ 0.33
TOP3A-219ENST00000584887 ARL8BQ9NVJ2 186 aa17.09■□□□□ 0.33
TOP3A-219ENST00000584887 CD300AQ9UGN4 299 aa17.09■□□□□ 0.33
TOP3A-219ENST00000584887 KCNG2Q9UJ96 466 aa17.09■□□□□ 0.33
TOP3A-219ENST00000584887 MGAM2Q2M2H8 2515 aa17.08■□□□□ 0.33
TOP3A-219ENST00000584887 TRAV40A0A0B4J280 105 aa17.08■□□□□ 0.32
TOP3A-219ENST00000584887 FAM20BO75063 409 aa17.08■□□□□ 0.32
TOP3A-219ENST00000584887 EGR1P18146 543 aa17.08■□□□□ 0.32
TOP3A-219ENST00000584887 CA6P23280 308 aa17.08■□□□□ 0.32
TOP3A-219ENST00000584887 RAD23AP54725 363 aa17.08■□□□□ 0.32
TOP3A-219ENST00000584887 OR8G1Q15617 311 aa17.08■□□□□ 0.32
TOP3A-219ENST00000584887 ZNF181Q2M3W8 571 aa17.08■□□□□ 0.32
TOP3A-219ENST00000584887 CYP2R1Q6VVX0 501 aa17.08■□□□□ 0.32
TOP3A-219ENST00000584887 OR51L1Q8NGJ5 315 aa17.08■□□□□ 0.32
TOP3A-219ENST00000584887 RAB40AQ8WXH6 277 aa17.08■□□□□ 0.32
TOP3A-219ENST00000584887 MMADHCQ9H3L0 296 aaPredicted RBP17.08■□□□□ 0.32
TOP3A-219ENST00000584887 CLN8Q9UBY8 286 aa17.08■□□□□ 0.32
TOP3A-219ENST00000584887 N6AMT1Q9Y5N5 214 aa17.08■□□□□ 0.32
TOP3A-219ENST00000584887 SOX21Q9Y651 276 aaPredicted RBP17.08■□□□□ 0.32
TOP3A-219ENST00000584887 GGT3PA6NGU5 568 aa17.07■□□□□ 0.32
TOP3A-219ENST00000584887 TNFRSF11BO00300 401 aa17.07■□□□□ 0.32
TOP3A-219ENST00000584887 HKR1P10072 659 aa17.07■□□□□ 0.32
TOP3A-219ENST00000584887 CPT2P23786 658 aa17.07■□□□□ 0.32
TOP3A-219ENST00000584887 FOXL1Q12952 345 aa17.07■□□□□ 0.32
TOP3A-219ENST00000584887 MAB21L1Q13394 359 aa17.07■□□□□ 0.32
TOP3A-219ENST00000584887 LYPD4Q6UWN0 246 aa17.07■□□□□ 0.32
TOP3A-219ENST00000584887 C16orf89Q6UX73 402 aa17.07■□□□□ 0.32
TOP3A-219ENST00000584887 LYPD2Q6UXB3 125 aa17.07■□□□□ 0.32
TOP3A-219ENST00000584887 OR9Q1Q8NGQ5 310 aa17.07■□□□□ 0.32
TOP3A-219ENST00000584887 OR2T4Q8NH00 348 aa17.07■□□□□ 0.32
TOP3A-219ENST00000584887 OR2AE1Q8NHA4 323 aa17.07■□□□□ 0.32
TOP3A-219ENST00000584887 NUDT16L1Q9BRJ7 211 aaKnown RBP17.07■□□□□ 0.32
TOP3A-219ENST00000584887 COPS4Q9BT78 406 aa17.07■□□□□ 0.32
TOP3A-219ENST00000584887 ADAT1Q9BUB4 502 aaKnown RBP17.07■□□□□ 0.32
TOP3A-219ENST00000584887 ZMAT3Q9HA38 289 aaKnown RBP17.07■□□□□ 0.32
TOP3A-219ENST00000584887 TBC1D23Q9NUY8 699 aa17.07■□□□□ 0.32
TOP3A-219ENST00000584887 CD300LBA8K4G0 201 aa17.06■□□□□ 0.32
TOP3A-219ENST00000584887 KRT36O76013 467 aa17.06■□□□□ 0.32
TOP3A-219ENST00000584887 SPARCP09486 303 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms