RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 CTRB1P17538 263 aa3.13□□□□□ -1.91
SMARCE1-219ENST00000583294 CXCL12P48061 93 aa3.13□□□□□ -1.91
SMARCE1-219ENST00000583294 RAB9AP51151 201 aa3.13□□□□□ -1.91
SMARCE1-219ENST00000583294 CCNG1P51959 295 aa3.13□□□□□ -1.91
SMARCE1-219ENST00000583294 TAS2R31P59538 309 aa3.13□□□□□ -1.91
SMARCE1-219ENST00000583294 RPL23P62829 140 aaKnown RBP3.13□□□□□ -1.91
SMARCE1-219ENST00000583294 GBE1Q04446 702 aa3.13□□□□□ -1.91
SMARCE1-219ENST00000583294 CYP24A1Q07973 514 aa3.13□□□□□ -1.91
SMARCE1-219ENST00000583294 RBMY1FQ15415 496 aaKnown RBP3.13□□□□□ -1.91
SMARCE1-219ENST00000583294 LCE1CQ5T751 118 aa3.13□□□□□ -1.91
SMARCE1-219ENST00000583294 LCE1BQ5T7P3 118 aa3.13□□□□□ -1.91
SMARCE1-219ENST00000583294 SLC25A34Q6PIV7 304 aa3.13□□□□□ -1.91
SMARCE1-219ENST00000583294 HMGN2P46Q86SG4 172 aa3.13□□□□□ -1.91
SMARCE1-219ENST00000583294 JAGN1Q8N5M9 183 aa3.13□□□□□ -1.91
SMARCE1-219ENST00000583294 CSGALNACT2Q8N6G5 542 aa3.13□□□□□ -1.91
SMARCE1-219ENST00000583294 OR56A4Q8NGH8 313 aa3.13□□□□□ -1.91
SMARCE1-219ENST00000583294 LILRB4Q8NHJ6 448 aa3.13□□□□□ -1.91
SMARCE1-219ENST00000583294 RNF157Q96PX1 679 aa3.13□□□□□ -1.91
SMARCE1-219ENST00000583294 ZNF2Q9BSG1 426 aaPredicted RBP3.13□□□□□ -1.91
SMARCE1-219ENST00000583294 SCRT1Q9BWW7 348 aa3.13□□□□□ -1.91
SMARCE1-219ENST00000583294 TMEM27Q9HBJ8 222 aa3.13□□□□□ -1.91
SMARCE1-219ENST00000583294 MYOZ1Q9NP98 299 aaPredicted RBP3.13□□□□□ -1.91
SMARCE1-219ENST00000583294 MED4Q9NPJ6 270 aa3.13□□□□□ -1.91
SMARCE1-219ENST00000583294 TBC1D24Q9ULP9 559 aa3.13□□□□□ -1.91
SMARCE1-219ENST00000583294 RCL1Q9Y2P8 373 aaKnown RBP3.13□□□□□ -1.91
SMARCE1-219ENST00000583294 PTPRTO14522 1441 aa3.12□□□□□ -1.91
SMARCE1-219ENST00000583294 SERPINE3A8MV23 424 aa3.12□□□□□ -1.91
SMARCE1-219ENST00000583294 NDUFC2-KCTD14E9PQ53 114 aa3.12□□□□□ -1.91
SMARCE1-219ENST00000583294 M0R3G1 203 aa3.12□□□□□ -1.91
SMARCE1-219ENST00000583294 NME4O00746 187 aa3.12□□□□□ -1.91
SMARCE1-219ENST00000583294 CHST10O43529 356 aa3.12□□□□□ -1.91
SMARCE1-219ENST00000583294 NMT2O60551 498 aa3.12□□□□□ -1.91
SMARCE1-219ENST00000583294 RCBTB2O95199 551 aa3.12□□□□□ -1.91
SMARCE1-219ENST00000583294 ZNF688P0C7X2 276 aa3.12□□□□□ -1.91
SMARCE1-219ENST00000583294 POLR2MP0CAP2 368 aa3.12□□□□□ -1.91
SMARCE1-219ENST00000583294 OR8G3PP0DMU2 310 aa3.12□□□□□ -1.91
SMARCE1-219ENST00000583294 RFC3P40938 356 aa3.12□□□□□ -1.91
SMARCE1-219ENST00000583294 TAS2R46P59540 309 aa3.12□□□□□ -1.91
SMARCE1-219ENST00000583294 CRADDP78560 199 aa3.12□□□□□ -1.91
SMARCE1-219ENST00000583294 IL18Q14116 193 aa3.12□□□□□ -1.91
SMARCE1-219ENST00000583294 ITIH4Q14624 930 aa3.12□□□□□ -1.91
SMARCE1-219ENST00000583294 SHHQ15465 462 aa3.12□□□□□ -1.91
SMARCE1-219ENST00000583294 ADNP2Q6IQ32 1131 aa3.12□□□□□ -1.91
SMARCE1-219ENST00000583294 IGFL1Q6UW32 110 aa3.12□□□□□ -1.91
SMARCE1-219ENST00000583294 ARRDC1Q8N5I2 433 aa3.12□□□□□ -1.91
SMARCE1-219ENST00000583294 DEDD2Q8WXF8 326 aa3.12□□□□□ -1.91
SMARCE1-219ENST00000583294 DOK1Q99704 481 aa3.12□□□□□ -1.91
SMARCE1-219ENST00000583294 RBBP8Q99708 897 aa3.12□□□□□ -1.91
SMARCE1-219ENST00000583294 TIMM29Q9BSF4 260 aa3.12□□□□□ -1.91
SMARCE1-219ENST00000583294 SLIRPQ9GZT3 109 aaKnown RBP3.12□□□□□ -1.91
SMARCE1-219ENST00000583294 ING2Q9H160 280 aa3.12□□□□□ -1.91
SMARCE1-219ENST00000583294 ELOVL6Q9H5J4 265 aa3.12□□□□□ -1.91
SMARCE1-219ENST00000583294 FBXO6Q9NRD1 293 aaPredicted RBP3.12□□□□□ -1.91
SMARCE1-219ENST00000583294 SLC17A7Q9P2U7 560 aa3.12□□□□□ -1.91
SMARCE1-219ENST00000583294 COL22A1Q8NFW1 1626 aaPredicted RBP3.11□□□□□ -1.91
SMARCE1-219ENST00000583294 IGHV1-69DA0A0B4J2H0 117 aa3.11□□□□□ -1.91
SMARCE1-219ENST00000583294 SPRR5A0A1B0GTR4 108 aa3.11□□□□□ -1.91
SMARCE1-219ENST00000583294 TSPAN11A1L157 253 aa3.11□□□□□ -1.91
SMARCE1-219ENST00000583294 RRP8O43159 456 aaKnown RBP3.11□□□□□ -1.91
SMARCE1-219ENST00000583294 CACNG3O60359 315 aa3.11□□□□□ -1.91
SMARCE1-219ENST00000583294 HPRT1P00492 218 aa3.11□□□□□ -1.91
SMARCE1-219ENST00000583294 ANXA8P13928 327 aa3.11□□□□□ -1.91
SMARCE1-219ENST00000583294 RAB4AP20338 218 aa3.11□□□□□ -1.91
SMARCE1-219ENST00000583294 USF1P22415 310 aaPredicted RBP3.11□□□□□ -1.91
SMARCE1-219ENST00000583294 NBL1P41271 181 aa3.11□□□□□ -1.91
SMARCE1-219ENST00000583294 CACNG7P62955 275 aa3.11□□□□□ -1.91
SMARCE1-219ENST00000583294 NCF4Q15080 339 aa3.11□□□□□ -1.91
SMARCE1-219ENST00000583294 TRMT5Q32P41 509 aaKnown RBP3.11□□□□□ -1.91
SMARCE1-219ENST00000583294 GCSAMLQ5JQS6 135 aa3.11□□□□□ -1.91
SMARCE1-219ENST00000583294 ANXA8L1Q5VT79 327 aa3.11□□□□□ -1.91
SMARCE1-219ENST00000583294 BHLHA15Q7RTS1 189 aaPredicted RBP3.11□□□□□ -1.91
SMARCE1-219ENST00000583294 NEGR1Q7Z3B1 354 aa3.11□□□□□ -1.91
SMARCE1-219ENST00000583294 TMEM256Q8N2U0 113 aa3.11□□□□□ -1.91
SMARCE1-219ENST00000583294 BPIFCQ8NFQ6 507 aa3.11□□□□□ -1.91
SMARCE1-219ENST00000583294 OR52P1PQ8NH57 321 aa3.11□□□□□ -1.91
SMARCE1-219ENST00000583294 UQCC2Q9BRT2 126 aa3.11□□□□□ -1.91
SMARCE1-219ENST00000583294 GGTLC1Q9BX51 225 aa3.11□□□□□ -1.91
SMARCE1-219ENST00000583294 PIGUQ9H490 435 aa3.11□□□□□ -1.91
SMARCE1-219ENST00000583294 AUNIPQ9H7T9 357 aa3.11□□□□□ -1.91
SMARCE1-219ENST00000583294 CLN6Q9NWW5 311 aa3.11□□□□□ -1.91
SMARCE1-219ENST00000583294 BRWD3Q6RI45 1802 aa3.11□□□□□ -1.91
SMARCE1-219ENST00000583294 PCDH11XQ9BZA7 1347 aa3.11□□□□□ -1.91
SMARCE1-219ENST00000583294 TSPOAP1O95153 1857 aa3.11□□□□□ -1.91
SMARCE1-219ENST00000583294 YEATS2Q9ULM3 1422 aa3.1□□□□□ -1.91
SMARCE1-219ENST00000583294 KCNE1BA0A087WTH5 132 aa3.1□□□□□ -1.91
SMARCE1-219ENST00000583294 KRBOX1C9JBD0 128 aa3.1□□□□□ -1.91
SMARCE1-219ENST00000583294 RPL36A-HNRNPH2H7BZ11 118 aa3.1□□□□□ -1.91
SMARCE1-219ENST00000583294 FCN3O75636 299 aa3.1□□□□□ -1.91
SMARCE1-219ENST00000583294 HLA-DQB1P01920 261 aa3.1□□□□□ -1.91
SMARCE1-219ENST00000583294 IFNW1P05000 195 aa3.1□□□□□ -1.91
SMARCE1-219ENST00000583294 IL4P05112 153 aa3.1□□□□□ -1.91
SMARCE1-219ENST00000583294 FGF4P08620 206 aa3.1□□□□□ -1.91
SMARCE1-219ENST00000583294 TCP1P17987 556 aaKnown RBP3.1□□□□□ -1.91
SMARCE1-219ENST00000583294 TALDO1P37837 337 aa3.1□□□□□ -1.91
SMARCE1-219ENST00000583294 RPS5P46782 204 aaKnown RBP3.1□□□□□ -1.91
SMARCE1-219ENST00000583294 SERPINB8P50452 374 aa3.1□□□□□ -1.91
SMARCE1-219ENST00000583294 NDUFA8P51970 172 aa3.1□□□□□ -1.91
SMARCE1-219ENST00000583294 GFERP55789 205 aa3.1□□□□□ -1.91
SMARCE1-219ENST00000583294 ZNF121P58317 390 aaPredicted RBP3.1□□□□□ -1.91
SMARCE1-219ENST00000583294 RPS15AP62244 130 aaKnown RBP3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms