RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	MUL1	Q969V5	352 aa		3.82	□□□□□ -1.8
MSI2-216	ENST00000582772	TESC	Q96BS2	214 aa		3.82	□□□□□ -1.8
MSI2-216	ENST00000582772	FAM120B	Q96EK7	910 aa	Known RBP	3.82	□□□□□ -1.8
MSI2-216	ENST00000582772	PYURF	Q96I23	114 aa		3.82	□□□□□ -1.8
MSI2-216	ENST00000582772	AMDHD1	Q96NU7	426 aa		3.82	□□□□□ -1.8
MSI2-216	ENST00000582772	MS4A8	Q9BY19	250 aa		3.82	□□□□□ -1.8
MSI2-216	ENST00000582772	GABARAPL1	Q9H0R8	117 aa		3.82	□□□□□ -1.8
MSI2-216	ENST00000582772	EHD1	Q9H4M9	534 aa		3.82	□□□□□ -1.8
MSI2-216	ENST00000582772	MAGIX	Q9H6Y5	334 aa		3.82	□□□□□ -1.8
MSI2-216	ENST00000582772	CYSLTR2	Q9NS75	346 aa		3.82	□□□□□ -1.8
MSI2-216	ENST00000582772	TBCCD1	Q9NVR7	557 aa		3.82	□□□□□ -1.8
MSI2-216	ENST00000582772	SIRT5	Q9NXA8	310 aa		3.82	□□□□□ -1.8
MSI2-216	ENST00000582772	PITPNC1	Q9UKF7	332 aa		3.82	□□□□□ -1.8
MSI2-216	ENST00000582772	SLC22A14	Q9Y267	594 aa		3.82	□□□□□ -1.8
MSI2-216	ENST00000582772	ASB4	Q9Y574	426 aa		3.82	□□□□□ -1.8
MSI2-216	ENST00000582772	KCNE2	Q9Y6J6	123 aa		3.82	□□□□□ -1.8
MSI2-216	ENST00000582772		A0A096LPE4	126 aa		3.81	□□□□□ -1.8
MSI2-216	ENST00000582772	LOC100130705	A0A1B0GUX0	176 aa		3.81	□□□□□ -1.8
MSI2-216	ENST00000582772		A0A1W2PPZ6	126 aa		3.81	□□□□□ -1.8
MSI2-216	ENST00000582772	HTR3E	A5X5Y0	456 aa		3.81	□□□□□ -1.8
MSI2-216	ENST00000582772	RPL36A-HNRNPH2	H7BZ11	118 aa		3.81	□□□□□ -1.8
MSI2-216	ENST00000582772		J3QRK9	145 aa		3.81	□□□□□ -1.8
MSI2-216	ENST00000582772	CLIC1	O00299	241 aa		3.81	□□□□□ -1.8
MSI2-216	ENST00000582772	SLC1A7	O00341	560 aa		3.81	□□□□□ -1.8
MSI2-216	ENST00000582772	PGRMC2	O15173	223 aa		3.81	□□□□□ -1.8
MSI2-216	ENST00000582772	SLC16A6	O15403	523 aa		3.81	□□□□□ -1.8
MSI2-216	ENST00000582772	INMT	O95050	263 aa		3.81	□□□□□ -1.8
MSI2-216	ENST00000582772	MFN2	O95140	757 aa		3.81	□□□□□ -1.8
MSI2-216	ENST00000582772	CPSF4	O95639	269 aa	Known RBP	3.81	□□□□□ -1.8
MSI2-216	ENST00000582772	TFPT	P0C1Z6	253 aa		3.81	□□□□□ -1.8
MSI2-216	ENST00000582772	LAMP1	P11279	417 aa		3.81	□□□□□ -1.8
MSI2-216	ENST00000582772	CALR	P27797	417 aa	Known RBP	3.81	□□□□□ -1.8
MSI2-216	ENST00000582772	EPHA2	P29317	976 aa		3.81	□□□□□ -1.8
MSI2-216	ENST00000582772	FMO3	P31513	532 aa		3.81	□□□□□ -1.8
MSI2-216	ENST00000582772	MAP2K4	P45985	399 aa		3.81	□□□□□ -1.8
MSI2-216	ENST00000582772	AP1S2	P56377	157 aa		3.81	□□□□□ -1.8
MSI2-216	ENST00000582772	GABARAPL2	P60520	117 aa		3.81	□□□□□ -1.8
MSI2-216	ENST00000582772	ARF6	P62330	175 aa		3.81	□□□□□ -1.8
MSI2-216	ENST00000582772	ESRRG	P62508	458 aa		3.81	□□□□□ -1.8
MSI2-216	ENST00000582772	PSG6	Q00889	435 aa		3.81	□□□□□ -1.8
MSI2-216	ENST00000582772	SPCS2	Q15005	226 aa		3.81	□□□□□ -1.8
MSI2-216	ENST00000582772	VMAC	Q2NL98	169 aa		3.81	□□□□□ -1.8
MSI2-216	ENST00000582772	ZMAT1	Q5H9K5	638 aa		3.81	□□□□□ -1.8
MSI2-216	ENST00000582772	C1orf134	Q5TEV5	83 aa		3.81	□□□□□ -1.8
MSI2-216	ENST00000582772	TTC23	Q5W5X9	447 aa		3.81	□□□□□ -1.8
MSI2-216	ENST00000582772	FAM53A	Q6NSI3	398 aa	Predicted RBP	3.81	□□□□□ -1.8
MSI2-216	ENST00000582772		Q6ZNX1	250 aa		3.81	□□□□□ -1.8
MSI2-216	ENST00000582772	FKBP9P1	Q75LS8	142 aa		3.81	□□□□□ -1.8
MSI2-216	ENST00000582772	LINGO2	Q7L985	606 aa		3.81	□□□□□ -1.8
MSI2-216	ENST00000582772	SPATA12	Q7Z6I5	190 aa		3.81	□□□□□ -1.8
MSI2-216	ENST00000582772	THOC6	Q86W42	341 aa	Known RBP	3.81	□□□□□ -1.8
MSI2-216	ENST00000582772	ZDHHC13	Q8IUH4	622 aa		3.81	□□□□□ -1.8
MSI2-216	ENST00000582772	ZDHHC21	Q8IVQ6	265 aa		3.81	□□□□□ -1.8
MSI2-216	ENST00000582772	C8orf59	Q8N0T1	100 aa	Predicted RBP	3.81	□□□□□ -1.8
MSI2-216	ENST00000582772	KRT78	Q8N1N4	520 aa		3.81	□□□□□ -1.8
MSI2-216	ENST00000582772	TCAIM	Q8N3R3	496 aa		3.81	□□□□□ -1.8
MSI2-216	ENST00000582772	C1orf52	Q8N6N3	182 aa	Known RBP	3.81	□□□□□ -1.8
MSI2-216	ENST00000582772	DRAXIN	Q8NBI3	349 aa	Predicted RBP	3.81	□□□□□ -1.8
MSI2-216	ENST00000582772	OR4N2	Q8NGD1	307 aa		3.81	□□□□□ -1.8
MSI2-216	ENST00000582772	ZNF420	Q8TAQ5	688 aa	Predicted RBP	3.81	□□□□□ -1.8
MSI2-216	ENST00000582772	CNIH3	Q8TBE1	160 aa		3.81	□□□□□ -1.8
MSI2-216	ENST00000582772	FAM81A	Q8TBF8	368 aa		3.81	□□□□□ -1.8
MSI2-216	ENST00000582772	PNPT1	Q8TCS8	783 aa	Known RBP	3.81	□□□□□ -1.8
MSI2-216	ENST00000582772	C7orf34	Q96L11	122 aa		3.81	□□□□□ -1.8
MSI2-216	ENST00000582772	RDH12	Q96NR8	316 aa		3.81	□□□□□ -1.8
MSI2-216	ENST00000582772	DUX3	Q96PT4	197 aa		3.81	□□□□□ -1.8
MSI2-216	ENST00000582772	ARHGDIG	Q99819	225 aa		3.81	□□□□□ -1.8
MSI2-216	ENST00000582772	KLHDC3	Q9BQ90	382 aa		3.81	□□□□□ -1.8
MSI2-216	ENST00000582772	BTBD2	Q9BX70	525 aa		3.81	□□□□□ -1.8
MSI2-216	ENST00000582772	ELOVL6	Q9H5J4	265 aa		3.81	□□□□□ -1.8
MSI2-216	ENST00000582772	PLGRKT	Q9HBL7	147 aa		3.81	□□□□□ -1.8
MSI2-216	ENST00000582772	ERVK-18	Q9QC07	812 aa		3.81	□□□□□ -1.8
MSI2-216	ENST00000582772	FBXL3	Q9UKT7	428 aa		3.81	□□□□□ -1.8
MSI2-216	ENST00000582772	SNX6	Q9UNH7	406 aa		3.81	□□□□□ -1.8
MSI2-216	ENST00000582772	AP3M1	Q9Y2T2	418 aa		3.81	□□□□□ -1.8
MSI2-216	ENST00000582772	DYRK1B	Q9Y463	629 aa		3.81	□□□□□ -1.8
MSI2-216	ENST00000582772		A0A0J9YWU9	116 aa		3.8	□□□□□ -1.8
MSI2-216	ENST00000582772	PLSCR5	A0PG75	271 aa		3.8	□□□□□ -1.8
MSI2-216	ENST00000582772	GXYLT2	A0PJZ3	443 aa		3.8	□□□□□ -1.8
MSI2-216	ENST00000582772	GLOD5	A6NK44	160 aa		3.8	□□□□□ -1.8
MSI2-216	ENST00000582772		M0R2N4	97 aa		3.8	□□□□□ -1.8
MSI2-216	ENST00000582772	SULT2B1	O00204	365 aa		3.8	□□□□□ -1.8
MSI2-216	ENST00000582772	CCRL2	O00421	344 aa		3.8	□□□□□ -1.8
MSI2-216	ENST00000582772	RFXANK	O14593	260 aa		3.8	□□□□□ -1.8
MSI2-216	ENST00000582772	HSPA12A	O43301	675 aa		3.8	□□□□□ -1.8
MSI2-216	ENST00000582772	GMNN	O75496	209 aa		3.8	□□□□□ -1.8
MSI2-216	ENST00000582772	WBP4	O75554	376 aa	Known RBP	3.8	□□□□□ -1.8
MSI2-216	ENST00000582772	PMS2P2	O95744	297 aa		3.8	□□□□□ -1.8
MSI2-216	ENST00000582772	ZNF682	O95780	498 aa		3.8	□□□□□ -1.8
MSI2-216	ENST00000582772	IFNA14	P01570	189 aa		3.8	□□□□□ -1.8
MSI2-216	ENST00000582772	MT-ND2	P03891	347 aa		3.8	□□□□□ -1.8
MSI2-216	ENST00000582772	C1GALT1C1L	P0DN25	315 aa		3.8	□□□□□ -1.8
MSI2-216	ENST00000582772	POR	P16435	677 aa	Predicted RBP	3.8	□□□□□ -1.8
MSI2-216	ENST00000582772	ZNF182	P17025	639 aa	Predicted RBP	3.8	□□□□□ -1.8
MSI2-216	ENST00000582772	GPX2	P18283	190 aa		3.8	□□□□□ -1.8
MSI2-216	ENST00000582772	TNFRSF1B	P20333	461 aa		3.8	□□□□□ -1.8
MSI2-216	ENST00000582772	PRPS1L1	P21108	318 aa		3.8	□□□□□ -1.8
MSI2-216	ENST00000582772	MAPK1	P28482	360 aa		3.8	□□□□□ -1.8
MSI2-216	ENST00000582772	KDELR2	P33947	212 aa		3.8	□□□□□ -1.8
MSI2-216	ENST00000582772	RANBP1	P43487	201 aa		3.8	□□□□□ -1.8

Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms