RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	10.64	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	NRBF2	Q96F24	287 aa		10.64	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	ZNF799	Q96GE5	643 aa		10.64	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	MAP6	Q96JE9	813 aa		10.64	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	OR2V2	Q96R30	315 aa		10.64	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	GAL3ST1	Q99999	423 aa		10.64	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	MMADHC	Q9H3L0	296 aa	Predicted RBP	10.64	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	TOR3A	Q9H497	397 aa		10.64	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	SP140L	Q9H930	580 aa		10.64	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	TMEM100	Q9NV29	134 aa		10.64	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	DNAJB9	Q9UBS3	223 aa		10.64	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	COMMD3-BMI1	R4GMX3	469 aa		10.64	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	DYSF	O75923	2080 aa		10.63	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708		A0A0G2JMP0	313 aa		10.63	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708		A0A0X1KG70	313 aa		10.63	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	TCRBV3S1	A0A5B6	114 aa		10.63	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708		H3BN98	237 aa		10.63	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	FOXH1	O75593	365 aa		10.63	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	ATP5H	O75947	161 aa		10.63	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	SOX14	O95416	240 aa		10.63	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	IGHV2-70	P01814	119 aa		10.63	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	LCAT	P04180	440 aa		10.63	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	PYCR1	P32322	319 aa		10.63	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	GATA4	P43694	442 aa		10.63	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	PPP1R8	Q12972	351 aa	Known RBP	10.63	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	GK2	Q14410	553 aa	Predicted RBP	10.63	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	HLX	Q14774	488 aa	Predicted RBP	10.63	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	OR2T2	Q6IF00	324 aa		10.63	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	PGAP1	Q75T13	922 aa		10.63	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	DCXR	Q7Z4W1	244 aa		10.63	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	SPATA24	Q86W54	205 aa		10.63	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	LRRC28	Q86X40	367 aa	Predicted RBP	10.63	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	KLB	Q86Z14	1044 aa		10.63	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	KLHL36	Q8N4N3	616 aa		10.63	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	ATG16L2	Q8NAA4	619 aa		10.63	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	PLPP7	Q8NBV4	271 aa		10.63	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	OR4M2	Q8NGB6	313 aa		10.63	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	ST7L	Q8TDW4	575 aa		10.63	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	MEGF10	Q96KG7	1140 aa		10.63	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	KCNJ15	Q99712	375 aa		10.63	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	NIPSNAP1	Q9BPW8	284 aa		10.63	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	TEX12	Q9BXU0	123 aa		10.63	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	MARCH7	Q9H992	704 aa		10.63	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	GCM1	Q9NP62	436 aa		10.63	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	G6PC2	Q9NQR9	355 aa		10.63	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	ARMC1	Q9NVT9	282 aa		10.63	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	METRN	Q9UJH8	293 aa		10.63	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	POMP	Q9Y244	141 aa		10.63	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	10.63	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	ISPD	A4D126	451 aa		10.62	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	LRRC30	A6NM36	301 aa		10.62	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	ZNF878	C9JN71	531 aa		10.62	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	TMEM178B	H3BS89	294 aa		10.62	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	ZNF593	O00488	134 aa	Predicted RBP	10.62	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	PLPP2	O43688	288 aa		10.62	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	E2F6	O75461	281 aa		10.62	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	OSM	P13725	252 aa		10.62	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	MDH2	P40926	338 aa	Known RBP	10.62	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	BTG1	P62324	171 aa		10.62	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	GRB2	P62993	217 aa	Known RBP	10.62	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	IL17REL	Q6ZVW7	336 aa		10.62	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	SHF	Q7M4L6	423 aa		10.62	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	MRPL21	Q7Z2W9	205 aa	Known RBP	10.62	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	C1orf87	Q8N0U7	546 aa		10.62	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	OR10S1	Q8NGN2	331 aa		10.62	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	OR9Q1	Q8NGQ5	310 aa		10.62	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	ITLN1	Q8WWA0	313 aa		10.62	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	SLAMF6	Q96DU3	332 aa		10.62	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	REPIN1	Q9BWE0	567 aa	Known RBP	10.62	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	WDR76	Q9H967	626 aa		10.62	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	PDP1	Q9P0J1	537 aa	Predicted RBP	10.62	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	PCDHB10	Q9UN67	800 aa		10.62	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	DNHD1	Q96M86	4753 aa		10.61	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	TVP23A	A6NH52	213 aa		10.61	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	GSC2	O15499	205 aa		10.61	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	PRODH	O43272	600 aa		10.61	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	TCF21	O43680	179 aa		10.61	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	GMDS	O60547	372 aa		10.61	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	FKBP6	O75344	327 aa		10.61	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	GLCE	O94923	617 aa		10.61	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	SPARC	P09486	303 aa		10.61	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	CFL1	P23528	166 aa	Known RBP	10.61	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	DDOST	P39656	456 aa		10.61	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	CD200	P41217	278 aa		10.61	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	SLC6A9	P48067	706 aa		10.61	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	ERF	P50548	548 aa		10.61	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	MMP16	P51512	607 aa		10.61	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	CBX1	P83916	185 aa		10.61	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	CDK5	Q00535	292 aa		10.61	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	MZT1	Q08AG7	82 aa		10.61	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	BNIP1	Q12981	228 aa		10.61	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	TAF13	Q15543	124 aa		10.61	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	SLC35D3	Q5M8T2	416 aa		10.61	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	LINC01590	Q5TEZ4	76 aa		10.61	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	FAHD2B	Q6P2I3	314 aa	Predicted RBP	10.61	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	SHQ1	Q6PI26	577 aa	Known RBP	10.61	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	OR5AS1	Q8N127	324 aa		10.61	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	ZNF454	Q8N9F8	522 aa		10.61	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	SPERT	Q8NA61	448 aa		10.61	□□□□□ -0.71
CDK5RAP3-222	ENST00000581708	ZNF511	Q8NB15	262 aa		10.61	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms