RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 HACD2Q6Y1H2 254 aa8.83□□□□□ -1
RFFL-209ENST00000581265 SLC26A10Q8NG04 563 aa8.83□□□□□ -1
RFFL-209ENST00000581265 OR10S1Q8NGN2 331 aa8.83□□□□□ -1
RFFL-209ENST00000581265 TAF15Q92804 592 aaKnown RBP eCLIP8.83□□□□□ -12e-6■■□□□ 11.9
RFFL-209ENST00000581265 FAM162AQ96A26 154 aa8.83□□□□□ -1
RFFL-209ENST00000581265 DHRS1Q96LJ7 313 aa8.83□□□□□ -1
RFFL-209ENST00000581265 FUZQ9BT04 418 aa8.83□□□□□ -1
RFFL-209ENST00000581265 WDR76Q9H967 626 aa8.83□□□□□ -1
RFFL-209ENST00000581265 SRA1Q9HD15 236 aaKnown RBP8.83□□□□□ -1
RFFL-209ENST00000581265 NOX4Q9NPH5 578 aa8.83□□□□□ -1
RFFL-209ENST00000581265 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.83□□□□□ -1
RFFL-209ENST00000581265 ARGLU1Q9NWB6 273 aaPredicted RBP8.83□□□□□ -1
RFFL-209ENST00000581265 RPS6KA6Q9UK32 745 aa8.83□□□□□ -1
RFFL-209ENST00000581265 AURKCQ9UQB9 309 aa8.83□□□□□ -1
RFFL-209ENST00000581265 FAM181BA6NEQ2 426 aa8.82□□□□□ -1
RFFL-209ENST00000581265 SRRM5B3KS81 715 aa8.82□□□□□ -1
RFFL-209ENST00000581265 PTBP3O95758 552 aaKnown RBP8.82□□□□□ -1
RFFL-209ENST00000581265 LIPFP07098 398 aa8.82□□□□□ -1
RFFL-209ENST00000581265 IRF2P14316 349 aa8.82□□□□□ -1
RFFL-209ENST00000581265 NCK1P16333 377 aa8.82□□□□□ -1
RFFL-209ENST00000581265 OMGP23515 440 aa8.82□□□□□ -1
RFFL-209ENST00000581265 CD200P41217 278 aa8.82□□□□□ -1
RFFL-209ENST00000581265 CENPAP49450 140 aa8.82□□□□□ -1
RFFL-209ENST00000581265 RAD23AP54725 363 aa8.82□□□□□ -1
RFFL-209ENST00000581265 FGF12P61328 243 aa8.82□□□□□ -1
RFFL-209ENST00000581265 MALLQ13021 153 aa8.82□□□□□ -1
RFFL-209ENST00000581265 DEFB112Q30KQ8 113 aa8.82□□□□□ -1
RFFL-209ENST00000581265 RFX4Q33E94 735 aa8.82□□□□□ -1
RFFL-209ENST00000581265 SLC36A3Q495N2 470 aa8.82□□□□□ -1
RFFL-209ENST00000581265 CLEC12AQ5QGZ9 265 aa8.82□□□□□ -1
RFFL-209ENST00000581265 SLC18B1Q6NT16 456 aa8.82□□□□□ -1
RFFL-209ENST00000581265 BRD3OSQ6XYD6 125 aa8.82□□□□□ -1
RFFL-209ENST00000581265 Q6YL49 198 aa8.82□□□□□ -1
RFFL-209ENST00000581265 SPATC1Q76KD6 591 aa8.82□□□□□ -1
RFFL-209ENST00000581265 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.82□□□□□ -1
RFFL-209ENST00000581265 NAA40Q86UY6 237 aa8.82□□□□□ -1
RFFL-209ENST00000581265 ZBTB46Q86UZ6 589 aa8.82□□□□□ -1
RFFL-209ENST00000581265 OR11L1Q8NGX0 322 aa8.82□□□□□ -1
RFFL-209ENST00000581265 ZDHHC16Q969W1 377 aa8.82□□□□□ -1
RFFL-209ENST00000581265 ERMAPQ96PL5 475 aaPredicted RBP8.82□□□□□ -1
RFFL-209ENST00000581265 NMNAT3Q96T66 252 aa8.82□□□□□ -1
RFFL-209ENST00000581265 PITX2Q99697 317 aa8.82□□□□□ -1
RFFL-209ENST00000581265 KCTD14Q9BQ13 255 aaPredicted RBP8.82□□□□□ -1
RFFL-209ENST00000581265 CDADC1Q9BWV3 514 aa8.82□□□□□ -1
RFFL-209ENST00000581265 SLC22A4Q9H015 551 aa8.82□□□□□ -1
RFFL-209ENST00000581265 CCDC134Q9H6E4 229 aa8.82□□□□□ -1
RFFL-209ENST00000581265 KRCC1Q9NPI7 259 aaPredicted RBP8.82□□□□□ -1
RFFL-209ENST00000581265 DCAF13Q9NV06 445 aaKnown RBP8.82□□□□□ -1
RFFL-209ENST00000581265 ABCD2Q9UBJ2 740 aa8.82□□□□□ -1
RFFL-209ENST00000581265 CYB5R1Q9UHQ9 305 aa8.82□□□□□ -1
RFFL-209ENST00000581265 MDFIC2A0A1B0GVS7 189 aa8.81□□□□□ -1
RFFL-209ENST00000581265 C22orf46C9J442 243 aa8.81□□□□□ -1
RFFL-209ENST00000581265 F5H5K5 113 aa8.81□□□□□ -1
RFFL-209ENST00000581265 TNFRSF13BO14836 293 aaPredicted RBP8.81□□□□□ -1
RFFL-209ENST00000581265 ENSAO43768 121 aaKnown RBP8.81□□□□□ -1
RFFL-209ENST00000581265 IDH3BO43837 385 aa8.81□□□□□ -1
RFFL-209ENST00000581265 CCDC22O60826 627 aa8.81□□□□□ -1
RFFL-209ENST00000581265 FAM20BO75063 409 aa8.81□□□□□ -1
RFFL-209ENST00000581265 RENP00797 406 aa8.81□□□□□ -1
RFFL-209ENST00000581265 LCATP04180 440 aa8.81□□□□□ -1
RFFL-209ENST00000581265 SLC6A6P31641 620 aa8.81□□□□□ -1
RFFL-209ENST00000581265 GGT2P36268 569 aa8.81□□□□□ -1
RFFL-209ENST00000581265 NPY4RP50391 375 aa8.81□□□□□ -1
RFFL-209ENST00000581265 SMIM11AP58511 58 aa8.81□□□□□ -1
RFFL-209ENST00000581265 MPPED2Q15777 294 aa8.81□□□□□ -1
RFFL-209ENST00000581265 FBLN7Q53RD9 439 aa8.81□□□□□ -1
RFFL-209ENST00000581265 GPR157Q5UAW9 335 aa8.81□□□□□ -1
RFFL-209ENST00000581265 CD276Q5ZPR3 534 aa8.81□□□□□ -1
RFFL-209ENST00000581265 GLYATQ6IB77 296 aa8.81□□□□□ -1
RFFL-209ENST00000581265 CFAP77Q6ZQR2 320 aa8.81□□□□□ -1
RFFL-209ENST00000581265 PGAP1Q75T13 922 aa8.81□□□□□ -1
RFFL-209ENST00000581265 TMEM86BQ8N661 226 aa8.81□□□□□ -1
RFFL-209ENST00000581265 PLPP7Q8NBV4 271 aa8.81□□□□□ -1
RFFL-209ENST00000581265 OR2AJ1Q8NGZ0 328 aa8.81□□□□□ -1
RFFL-209ENST00000581265 OR4F5Q8NH21 305 aa8.81□□□□□ -1
RFFL-209ENST00000581265 OR52J3Q8NH60 311 aa8.81□□□□□ -1
RFFL-209ENST00000581265 SLCO4A1Q96BD0 722 aa8.81□□□□□ -1
RFFL-209ENST00000581265 FAM71F1Q96KD3 344 aaPredicted RBP8.81□□□□□ -1
RFFL-209ENST00000581265 ATF6BQ99941 703 aa8.81□□□□□ -1
RFFL-209ENST00000581265 BEX1Q9HBH7 125 aa8.81□□□□□ -1
RFFL-209ENST00000581265 PNRC2Q9NPJ4 139 aaKnown RBP8.81□□□□□ -1
RFFL-209ENST00000581265 RNF7Q9UBF6 113 aa8.81□□□□□ -1
RFFL-209ENST00000581265 TMCC3Q9ULS5 477 aa8.81□□□□□ -1
RFFL-209ENST00000581265 OR6C68A6NDL8 312 aa8.8□□□□□ -1
RFFL-209ENST00000581265 CD300LBA8K4G0 201 aa8.8□□□□□ -1
RFFL-209ENST00000581265 ZNF879B4DU55 563 aa8.8□□□□□ -1
RFFL-209ENST00000581265 P2RY10O00398 339 aa8.8□□□□□ -1
RFFL-209ENST00000581265 NDUFA2O43678 99 aa8.8□□□□□ -1
RFFL-209ENST00000581265 GMDSO60547 372 aa8.8□□□□□ -1
RFFL-209ENST00000581265 DIRAS1O95057 198 aa8.8□□□□□ -1
RFFL-209ENST00000581265 NDUFA7O95182 113 aa8.8□□□□□ -1
RFFL-209ENST00000581265 CRYBA1P05813 215 aa8.8□□□□□ -1
RFFL-209ENST00000581265 HIST1H1CP16403 213 aaKnown RBP8.8□□□□□ -1
RFFL-209ENST00000581265 CA6P23280 308 aa8.8□□□□□ -1
RFFL-209ENST00000581265 TPTEP56180 551 aa8.8□□□□□ -1
RFFL-209ENST00000581265 PRSS12P56730 875 aa8.8□□□□□ -1
RFFL-209ENST00000581265 PSME3P61289 254 aa8.8□□□□□ -1
RFFL-209ENST00000581265 DBPQ10586 325 aaPredicted RBP8.8□□□□□ -1
RFFL-209ENST00000581265 TRAP1Q12931 704 aaKnown RBP8.8□□□□□ -1
RFFL-209ENST00000581265 KRT72Q14CN4 511 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms