RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 OCEL1Q9H607 264 aa12.35□□□□□ -0.43
SKA2-205ENST00000580541 OPA3Q9H6K4 179 aa12.35□□□□□ -0.43
SKA2-205ENST00000580541 PAK1IP1Q9NWT1 392 aaPredicted RBP12.35□□□□□ -0.43
SKA2-205ENST00000580541 GCH1P30793 250 aa12.34□□□□□ -0.43
SKA2-205ENST00000580541 CALCRP30988 508 aa12.34□□□□□ -0.43
SKA2-205ENST00000580541 TGM4P49221 684 aa12.34□□□□□ -0.43
SKA2-205ENST00000580541 CCR9P51686 369 aa12.34□□□□□ -0.43
SKA2-205ENST00000580541 PPP1CBP62140 327 aa12.34□□□□□ -0.43
SKA2-205ENST00000580541 SPHARQ15513 63 aa12.34□□□□□ -0.43
SKA2-205ENST00000580541 BCL2L15Q5TBC7 163 aa12.34□□□□□ -0.43
SKA2-205ENST00000580541 RGS7BPQ6MZT1 257 aaPredicted RBP12.34□□□□□ -0.43
SKA2-205ENST00000580541 FDX2Q6P4F2 183 aa12.34□□□□□ -0.43
SKA2-205ENST00000580541 RPL22L1Q6P5R6 122 aaKnown RBP12.34□□□□□ -0.43
SKA2-205ENST00000580541 ZNF773Q6PK81 442 aa12.34□□□□□ -0.43
SKA2-205ENST00000580541 COLCA1Q6ZS62 124 aa12.34□□□□□ -0.43
SKA2-205ENST00000580541 FAM57BQ71RH2 274 aa12.34□□□□□ -0.43
SKA2-205ENST00000580541 RFLNBQ8N5W9 214 aa12.34□□□□□ -0.43
SKA2-205ENST00000580541 CCDC54Q8NEL0 328 aa12.34□□□□□ -0.43
SKA2-205ENST00000580541 TSPAN14Q8NG11 270 aa12.34□□□□□ -0.43
SKA2-205ENST00000580541 OR1J1Q8NGS3 322 aa12.34□□□□□ -0.43
SKA2-205ENST00000580541 SPRYD4Q8WW59 207 aaPredicted RBP12.34□□□□□ -0.43
SKA2-205ENST00000580541 GATAD2BQ8WXI9 593 aa12.34□□□□□ -0.43
SKA2-205ENST00000580541 AKAP1Q92667 903 aaKnown RBP eCLIP12.34□□□□□ -0.43
SKA2-205ENST00000580541 ZNF649Q9BS31 505 aa12.34□□□□□ -0.43
SKA2-205ENST00000580541 TMEM204Q9BSN7 226 aa12.34□□□□□ -0.43
SKA2-205ENST00000580541 ZNF442Q9H7R0 627 aa12.34□□□□□ -0.43
SKA2-205ENST00000580541 ZNF696Q9H7X3 374 aa12.34□□□□□ -0.43
SKA2-205ENST00000580541 BRD7Q9NPI1 651 aa12.34□□□□□ -0.43
SKA2-205ENST00000580541 FAIMQ9NVQ4 179 aa12.34□□□□□ -0.43
SKA2-205ENST00000580541 CLEC2DQ9UHP7 191 aa12.34□□□□□ -0.43
SKA2-205ENST00000580541 GPR160Q9UJ42 338 aa12.34□□□□□ -0.43
SKA2-205ENST00000580541 FBXO9Q9UK97 447 aaPredicted RBP12.34□□□□□ -0.43
SKA2-205ENST00000580541 GTF2A1LQ9UNN4 478 aa12.34□□□□□ -0.43
SKA2-205ENST00000580541 CMAHPQ9Y471 501 aa12.34□□□□□ -0.43
SKA2-205ENST00000580541 N6AMT1Q9Y5N5 214 aa12.34□□□□□ -0.43
SKA2-205ENST00000580541 ADGRG4Q8IZF6 3080 aa12.34□□□□□ -0.43
SKA2-205ENST00000580541 ABCA4P78363 2273 aa12.34□□□□□ -0.43
SKA2-205ENST00000580541 A0A0U1RQV5 110 aa12.33□□□□□ -0.44
SKA2-205ENST00000580541 MAGEA13PA6NCF6 341 aa12.33□□□□□ -0.44
SKA2-205ENST00000580541 TRIM64A6NGJ6 449 aa12.33□□□□□ -0.44
SKA2-205ENST00000580541 ATP6V1G2-DDX39BF2Z307 99 aa12.33□□□□□ -0.44
SKA2-205ENST00000580541 MAGEB4O15481 346 aaPredicted RBP12.33□□□□□ -0.44
SKA2-205ENST00000580541 TBX1O43435 398 aa12.33□□□□□ -0.44
SKA2-205ENST00000580541 SMPD2O60906 423 aa12.33□□□□□ -0.44
SKA2-205ENST00000580541 MTRF1O75570 445 aaKnown RBP12.33□□□□□ -0.44
SKA2-205ENST00000580541 MT-ND2P03891 347 aa12.33□□□□□ -0.44
SKA2-205ENST00000580541 FAM157BP0CG42 384 aa12.33□□□□□ -0.44
SKA2-205ENST00000580541 SELEP16581 610 aa12.33□□□□□ -0.44
SKA2-205ENST00000580541 ZNF12P17014 697 aa12.33□□□□□ -0.44
SKA2-205ENST00000580541 SSTR2P30874 369 aa12.33□□□□□ -0.44
SKA2-205ENST00000580541 BDH1Q02338 343 aa12.33□□□□□ -0.44
SKA2-205ENST00000580541 ACSM1Q08AH1 577 aa12.33□□□□□ -0.44
SKA2-205ENST00000580541 SNTB2Q13425 540 aaKnown RBP12.33□□□□□ -0.44
SKA2-205ENST00000580541 IRF3Q14653 427 aa12.33□□□□□ -0.44
SKA2-205ENST00000580541 MED22Q15528 200 aa12.33□□□□□ -0.44
SKA2-205ENST00000580541 TBCEQ15813 527 aaPredicted RBP12.33□□□□□ -0.44
SKA2-205ENST00000580541 TIGD6Q17RP2 521 aa12.33□□□□□ -0.44
SKA2-205ENST00000580541 OR2G6Q5TZ20 316 aa12.33□□□□□ -0.44
SKA2-205ENST00000580541 ADAM5Q6NVV9 412 aa12.33□□□□□ -0.44
SKA2-205ENST00000580541 ZNF704Q6ZNC4 412 aaPredicted RBP12.33□□□□□ -0.44
SKA2-205ENST00000580541 MYPOPQ86VE0 399 aaPredicted RBP12.33□□□□□ -0.44
SKA2-205ENST00000580541 RORBQ92753 470 aa12.33□□□□□ -0.44
SKA2-205ENST00000580541 C14orf79Q96F83 325 aa12.33□□□□□ -0.44
SKA2-205ENST00000580541 PELI1Q96FA3 418 aa12.33□□□□□ -0.44
SKA2-205ENST00000580541 SIGLEC11Q96RL6 698 aa12.33□□□□□ -0.44
SKA2-205ENST00000580541 PBOV1Q9GZY1 135 aa12.33□□□□□ -0.44
SKA2-205ENST00000580541 COMMD4Q9H0A8 199 aa12.33□□□□□ -0.44
SKA2-205ENST00000580541 ISG20L2Q9H9L3 353 aaKnown RBP12.33□□□□□ -0.44
SKA2-205ENST00000580541 ISYNA1Q9NPH2 558 aa12.33□□□□□ -0.44
SKA2-205ENST00000580541 ACOXLQ9NUZ1 547 aa12.33□□□□□ -0.44
SKA2-205ENST00000580541 CISD1Q9NZ45 108 aaKnown RBP12.33□□□□□ -0.44
SKA2-205ENST00000580541 NUFIP1Q9UHK0 495 aaKnown RBP12.33□□□□□ -0.44
SKA2-205ENST00000580541 OR52A1Q9UKL2 312 aa12.33□□□□□ -0.44
SKA2-205ENST00000580541 EDARQ9UNE0 448 aa12.33□□□□□ -0.44
SKA2-205ENST00000580541 TRBV2A0A0J9YWF9 115 aa12.32□□□□□ -0.44
SKA2-205ENST00000580541 FAM221AA4D161 298 aa12.32□□□□□ -0.44
SKA2-205ENST00000580541 TMEM212A6NML5 194 aa12.32□□□□□ -0.44
SKA2-205ENST00000580541 SHISA9B4DS77 424 aa12.32□□□□□ -0.44
SKA2-205ENST00000580541 BMP4P12644 408 aa12.32□□□□□ -0.44
SKA2-205ENST00000580541 APOBEC3AP31941 199 aaPredicted RBP12.32□□□□□ -0.44
SKA2-205ENST00000580541 WNT5AP41221 380 aa12.32□□□□□ -0.44
SKA2-205ENST00000580541 NKX6-1P78426 367 aaPredicted RBP12.32□□□□□ -0.44
SKA2-205ENST00000580541 HGFACQ04756 655 aa12.32□□□□□ -0.44
SKA2-205ENST00000580541 GPR50Q13585 617 aa12.32□□□□□ -0.44
SKA2-205ENST00000580541 ALKBH1Q13686 389 aaKnown RBP12.32□□□□□ -0.44
SKA2-205ENST00000580541 ZNF672Q499Z4 452 aaPredicted RBP12.32□□□□□ -0.44
SKA2-205ENST00000580541 TMEM244Q5VVB8 128 aa12.32□□□□□ -0.44
SKA2-205ENST00000580541 ZNF367Q7RTV3 350 aa12.32□□□□□ -0.44
SKA2-205ENST00000580541 NAA40Q86UY6 237 aa12.32□□□□□ -0.44
SKA2-205ENST00000580541 CATSPERDQ86XM0 798 aa12.32□□□□□ -0.44
SKA2-205ENST00000580541 KLBQ86Z14 1044 aa12.32□□□□□ -0.44
SKA2-205ENST00000580541 ELMOD2Q8IZ81 293 aa12.32□□□□□ -0.44
SKA2-205ENST00000580541 SPARTQ8N0X7 666 aa12.32□□□□□ -0.44
SKA2-205ENST00000580541 PAQR4Q8N4S7 273 aaPredicted RBP12.32□□□□□ -0.44
SKA2-205ENST00000580541 OR2G2Q8NGZ5 317 aa12.32□□□□□ -0.44
SKA2-205ENST00000580541 DHRS9Q9BPW9 319 aa12.32□□□□□ -0.44
SKA2-205ENST00000580541 ACOT13Q9NPJ3 140 aa12.32□□□□□ -0.44
SKA2-205ENST00000580541 CA10Q9NS85 328 aa12.32□□□□□ -0.44
SKA2-205ENST00000580541 FAM206AQ9NX38 181 aa12.32□□□□□ -0.44
SKA2-205ENST00000580541 STARD10Q9Y365 291 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms