RNA–Protein interactions for RNA: ENST00000580357.1

IFT20-210, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 752 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-210ENST00000580357 TMEM163Q8TC26 289 aa13.98□□□□□ -0.17
IFT20-210ENST00000580357 THEM6Q8WUY1 208 aa13.98□□□□□ -0.17
IFT20-210ENST00000580357 RNF133Q8WVZ7 376 aa13.98□□□□□ -0.17
IFT20-210ENST00000580357 HPS1Q92902 700 aa13.98□□□□□ -0.17
IFT20-210ENST00000580357 STMN2Q93045 179 aa13.98□□□□□ -0.17
IFT20-210ENST00000580357 ELMOD3Q96FG2 381 aa13.98□□□□□ -0.17
IFT20-210ENST00000580357 C9orf16Q9BUW7 83 aa13.98□□□□□ -0.17
IFT20-210ENST00000580357 GABARAPL3Q9BY60 117 aa13.98□□□□□ -0.17
IFT20-210ENST00000580357 BPESC1Q9GZL8 116 aa13.98□□□□□ -0.17
IFT20-210ENST00000580357 POFUT1Q9H488 388 aa13.98□□□□□ -0.17
IFT20-210ENST00000580357 OPA3Q9H6K4 179 aa13.98□□□□□ -0.17
IFT20-210ENST00000580357 NIPAL2Q9H841 368 aa13.98□□□□□ -0.17
IFT20-210ENST00000580357 SAP30LQ9HAJ7 183 aa13.98□□□□□ -0.17
IFT20-210ENST00000580357 USE1Q9NZ43 259 aa13.98□□□□□ -0.17
IFT20-210ENST00000580357 NOP16Q9Y3C1 178 aaKnown RBP13.98□□□□□ -0.17
IFT20-210ENST00000580357 ACANP16112 2415 aa13.98□□□□□ -0.17
IFT20-210ENST00000580357 NIPBLQ6KC79 2804 aaeCLIP13.97□□□□□ -0.17
IFT20-210ENST00000580357 SLC22A31A6NKX4 558 aa13.97□□□□□ -0.17
IFT20-210ENST00000580357 IQCF6A8MYZ5 107 aa13.97□□□□□ -0.17
IFT20-210ENST00000580357 CD5LO43866 347 aa13.97□□□□□ -0.17
IFT20-210ENST00000580357 PRKYO43930 277 aa13.97□□□□□ -0.17
IFT20-210ENST00000580357 TACSTD2P09758 323 aa13.97□□□□□ -0.17
IFT20-210ENST00000580357 H2BFMP0C1H6 154 aa13.97□□□□□ -0.17
IFT20-210ENST00000580357 TNFRSF1AP19438 455 aa13.97□□□□□ -0.17
IFT20-210ENST00000580357 GPR6P46095 362 aaPredicted RBP13.97□□□□□ -0.17
IFT20-210ENST00000580357 GZMKP49863 264 aa13.97□□□□□ -0.17
IFT20-210ENST00000580357 ALDH3A2P51648 485 aa13.97□□□□□ -0.17
IFT20-210ENST00000580357 CHN2P52757 468 aa13.97□□□□□ -0.17
IFT20-210ENST00000580357 GGTLC2Q14390 218 aa13.97□□□□□ -0.17
IFT20-210ENST00000580357 TSTQ16762 297 aaKnown RBP13.97□□□□□ -0.17
IFT20-210ENST00000580357 HFEQ30201 348 aa13.97□□□□□ -0.17
IFT20-210ENST00000580357 CYB5R2Q6BCY4 276 aa13.97□□□□□ -0.17
IFT20-210ENST00000580357 KCTD18Q6PI47 426 aaPredicted RBP13.97□□□□□ -0.17
IFT20-210ENST00000580357 DEGS2Q6QHC5 323 aa13.97□□□□□ -0.17
IFT20-210ENST00000580357 PGAP1Q75T13 922 aa13.97□□□□□ -0.17
IFT20-210ENST00000580357 NAA40Q86UY6 237 aa13.97□□□□□ -0.17
IFT20-210ENST00000580357 GID4Q8IVV7 300 aa13.97□□□□□ -0.17
IFT20-210ENST00000580357 TCEANCQ8N8B7 351 aa13.97□□□□□ -0.17
IFT20-210ENST00000580357 MAPK1IP1LQ8NDC0 245 aa13.97□□□□□ -0.17
IFT20-210ENST00000580357 TRUB1Q8WWH5 349 aaKnown RBP13.97□□□□□ -0.17
IFT20-210ENST00000580357 MNTQ99583 582 aa13.97□□□□□ -0.17
IFT20-210ENST00000580357 TMEM100Q9NV29 134 aa13.97□□□□□ -0.17
IFT20-210ENST00000580357 IL19Q9UHD0 177 aa13.97□□□□□ -0.17
IFT20-210ENST00000580357 LAMP5Q9UJQ1 280 aa13.97□□□□□ -0.17
IFT20-210ENST00000580357 FLNAP21333 2647 aaKnown RBP13.97□□□□□ -0.17
IFT20-210ENST00000580357 LYNX1G3V0Z9 82 aa13.96□□□□□ -0.17
IFT20-210ENST00000580357 IFNL4K9M1U5 179 aa13.96□□□□□ -0.17
IFT20-210ENST00000580357 XRCC2O43543 280 aa13.96□□□□□ -0.17
IFT20-210ENST00000580357 ALPLP05186 524 aa13.96□□□□□ -0.17
IFT20-210ENST00000580357 LYNX1P0DP58 116 aa13.96□□□□□ -0.17
IFT20-210ENST00000580357 HOXB4P17483 251 aaPredicted RBP13.96□□□□□ -0.17
IFT20-210ENST00000580357 CFL1P23528 166 aaKnown RBP13.96□□□□□ -0.17
IFT20-210ENST00000580357 PRKXP51817 358 aa13.96□□□□□ -0.17
IFT20-210ENST00000580357 CDC42P60953 191 aa13.96□□□□□ -0.17
IFT20-210ENST00000580357 TNFAIP6P98066 277 aaPredicted RBP13.96□□□□□ -0.17
IFT20-210ENST00000580357 GK2Q14410 553 aaPredicted RBP13.96□□□□□ -0.17
IFT20-210ENST00000580357 HLXQ14774 488 aaPredicted RBP13.96□□□□□ -0.17
IFT20-210ENST00000580357 TMEM249Q2WGJ8 235 aa13.96□□□□□ -0.17
IFT20-210ENST00000580357 AADACL4Q5VUY2 407 aa13.96□□□□□ -0.17
IFT20-210ENST00000580357 OR2T2Q6IF00 324 aa13.96□□□□□ -0.17
IFT20-210ENST00000580357 USP51Q70EK9 711 aa13.96□□□□□ -0.17
IFT20-210ENST00000580357 MRPL21Q7Z2W9 205 aaKnown RBP13.96□□□□□ -0.17
IFT20-210ENST00000580357 BBS1Q8NFJ9 593 aa13.96□□□□□ -0.17
IFT20-210ENST00000580357 OR52H1Q8NGJ2 320 aa13.96□□□□□ -0.17
IFT20-210ENST00000580357 OR8J1Q8NGP2 316 aa13.96□□□□□ -0.17
IFT20-210ENST00000580357 ASB17Q8WXJ9 295 aa13.96□□□□□ -0.17
IFT20-210ENST00000580357 REPIN1Q9BWE0 567 aaKnown RBP13.96□□□□□ -0.17
IFT20-210ENST00000580357 SLC22A4Q9H015 551 aa13.96□□□□□ -0.17
IFT20-210ENST00000580357 RIBC2Q9H4K1 309 aa13.96□□□□□ -0.17
IFT20-210ENST00000580357 MSL2Q9HCI7 577 aa13.96□□□□□ -0.17
IFT20-210ENST00000580357 ZNF275Q9NSD4 429 aaPredicted RBP13.96□□□□□ -0.17
IFT20-210ENST00000580357 HAO2Q9NYQ3 351 aa13.96□□□□□ -0.17
IFT20-210ENST00000580357 ZSCAN5BA6NJL1 495 aa13.95□□□□□ -0.18
IFT20-210ENST00000580357 PPIHO43447 177 aaKnown RBP13.95□□□□□ -0.18
IFT20-210ENST00000580357 NCR1O76036 304 aa13.95□□□□□ -0.18
IFT20-210ENST00000580357 PSKH1P11801 424 aa13.95□□□□□ -0.18
IFT20-210ENST00000580357 ALOX5APP20292 161 aa13.95□□□□□ -0.18
IFT20-210ENST00000580357 EPHA2P29317 976 aa13.95□□□□□ -0.18
IFT20-210ENST00000580357 DDOSTP39656 456 aa13.95□□□□□ -0.18
IFT20-210ENST00000580357 OPRL1P41146 370 aa13.95□□□□□ -0.18
IFT20-210ENST00000580357 TMED1Q13445 227 aa13.95□□□□□ -0.18
IFT20-210ENST00000580357 TMEM255AQ5JRV8 349 aa13.95□□□□□ -0.18
IFT20-210ENST00000580357 PEG10Q86TG7 708 aaKnown RBP13.95□□□□□ -0.18
IFT20-210ENST00000580357 PQLC1Q8N2U9 271 aa13.95□□□□□ -0.18
IFT20-210ENST00000580357 OR2Z1Q8NG97 314 aa13.95□□□□□ -0.18
IFT20-210ENST00000580357 SPRYD4Q8WW59 207 aaPredicted RBP13.95□□□□□ -0.18
IFT20-210ENST00000580357 RAB1CQ92928 201 aa13.95□□□□□ -0.18
IFT20-210ENST00000580357 YIPF5Q969M3 257 aa13.95□□□□□ -0.18
IFT20-210ENST00000580357 ITFG2Q969R8 447 aa13.95□□□□□ -0.18
IFT20-210ENST00000580357 TIMD4Q96H15 378 aa13.95□□□□□ -0.18
IFT20-210ENST00000580357 SLC30A2Q9BRI3 323 aa13.95□□□□□ -0.18
IFT20-210ENST00000580357 WARS2Q9UGM6 360 aaKnown RBP13.95□□□□□ -0.18
IFT20-210ENST00000580357 VPS13CQ709C8 3753 aa13.94□□□□□ -0.18
IFT20-210ENST00000580357 ACOD1A6NK06 481 aa13.94□□□□□ -0.18
IFT20-210ENST00000580357 PHYHO14832 338 aa13.94□□□□□ -0.18
IFT20-210ENST00000580357 SELENOFO60613 162 aa13.94□□□□□ -0.18
IFT20-210ENST00000580357 ZNF254O75437 659 aa13.94□□□□□ -0.18
IFT20-210ENST00000580357 RP2O75695 350 aa13.94□□□□□ -0.18
IFT20-210ENST00000580357 CX3CR1P49238 355 aa13.94□□□□□ -0.18
IFT20-210ENST00000580357 SRP9P49458 86 aaKnown RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms