RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 ITFG2Q969R8 447 aa12.14□□□□□ -0.47
CSNK1D-209ENST00000578904 TMEM203Q969S6 136 aa12.14□□□□□ -0.47
CSNK1D-209ENST00000578904 ZNF799Q96GE5 643 aa12.14□□□□□ -0.47
CSNK1D-209ENST00000578904 PGAM5Q96HS1 289 aa12.14□□□□□ -0.47
CSNK1D-209ENST00000578904 C4orf45Q96LM5 186 aa12.14□□□□□ -0.47
CSNK1D-209ENST00000578904 KCTD7Q96MP8 289 aa12.14□□□□□ -0.47
CSNK1D-209ENST00000578904 DOK1Q99704 481 aa12.14□□□□□ -0.47
CSNK1D-209ENST00000578904 WNT5BQ9H1J7 359 aa12.14□□□□□ -0.47
CSNK1D-209ENST00000578904 OR10A2Q9H208 303 aa12.14□□□□□ -0.47
CSNK1D-209ENST00000578904 SLC17A5Q9NRA2 495 aa12.14□□□□□ -0.47
CSNK1D-209ENST00000578904 FRRS1LQ9P0K9 344 aa12.14□□□□□ -0.47
CSNK1D-209ENST00000578904 NUFIP1Q9UHK0 495 aaKnown RBP12.14□□□□□ -0.47
CSNK1D-209ENST00000578904 ZNF391Q9UJN7 358 aa12.14□□□□□ -0.47
CSNK1D-209ENST00000578904 SF3B6Q9Y3B4 125 aaKnown RBP12.14□□□□□ -0.47
CSNK1D-209ENST00000578904 GRIP1Q9Y3R0 1128 aa12.14□□□□□ -0.47
CSNK1D-209ENST00000578904 FLNCQ14315 2725 aa12.14□□□□□ -0.47
CSNK1D-209ENST00000578904 DOPEY1Q5JWR5 2465 aa12.14□□□□□ -0.47
CSNK1D-209ENST00000578904 ZNF879B4DU55 563 aa12.13□□□□□ -0.47
CSNK1D-209ENST00000578904 HLA-HP01893 362 aa12.13□□□□□ -0.47
CSNK1D-209ENST00000578904 ISG15P05161 165 aa12.13□□□□□ -0.47
CSNK1D-209ENST00000578904 STOMP27105 288 aa12.13□□□□□ -0.47
CSNK1D-209ENST00000578904 OTX1P32242 354 aaPredicted RBP12.13□□□□□ -0.47
CSNK1D-209ENST00000578904 FOXG1P55316 489 aaPredicted RBP12.13□□□□□ -0.47
CSNK1D-209ENST00000578904 ZNF121P58317 390 aaPredicted RBP12.13□□□□□ -0.47
CSNK1D-209ENST00000578904 RPS25P62851 125 aaKnown RBP12.13□□□□□ -0.47
CSNK1D-209ENST00000578904 TUBA1BP68363 451 aa12.13□□□□□ -0.47
CSNK1D-209ENST00000578904 TFF3Q07654 80 aa12.13□□□□□ -0.47
CSNK1D-209ENST00000578904 FAM27E3Q08E93 113 aa12.13□□□□□ -0.47
CSNK1D-209ENST00000578904 TBC1D28Q2M2D7 210 aa12.13□□□□□ -0.47
CSNK1D-209ENST00000578904 HIKESHIQ53FT3 197 aa12.13□□□□□ -0.47
CSNK1D-209ENST00000578904 WDR38Q5JTN6 314 aa12.13□□□□□ -0.47
CSNK1D-209ENST00000578904 TIMM23BQ5SRD1 257 aa12.13□□□□□ -0.47
CSNK1D-209ENST00000578904 CD200R1LQ6Q8B3 271 aa12.13□□□□□ -0.47
CSNK1D-209ENST00000578904 USP43Q70EL4 1123 aa12.13□□□□□ -0.47
CSNK1D-209ENST00000578904 TUBA1AQ71U36 451 aa12.13□□□□□ -0.47
CSNK1D-209ENST00000578904 AKR7LQ8NHP1 331 aa12.13□□□□□ -0.47
CSNK1D-209ENST00000578904 ABHD4Q8TB40 342 aa12.13□□□□□ -0.47
CSNK1D-209ENST00000578904 C12orf43Q96C57 262 aaKnown RBP12.13□□□□□ -0.47
CSNK1D-209ENST00000578904 PGLYRP3Q96LB9 341 aa12.13□□□□□ -0.47
CSNK1D-209ENST00000578904 PBOV1Q9GZY1 135 aa12.13□□□□□ -0.47
CSNK1D-209ENST00000578904 OR51E2Q9H255 320 aa12.13□□□□□ -0.47
CSNK1D-209ENST00000578904 FAM206AQ9NX38 181 aa12.13□□□□□ -0.47
CSNK1D-209ENST00000578904 HHLA2Q9UM44 414 aa12.13□□□□□ -0.47
CSNK1D-209ENST00000578904 KLF2Q9Y5W3 355 aaPredicted RBP12.13□□□□□ -0.47
CSNK1D-209ENST00000578904 RTTNQ86VV8 2226 aa12.13□□□□□ -0.47
CSNK1D-209ENST00000578904 A0A1B0GVI7 797 aa12.12□□□□□ -0.47
CSNK1D-209ENST00000578904 A1L4Q6 167 aa12.12□□□□□ -0.47
CSNK1D-209ENST00000578904 OR5H1A6NKK0 313 aa12.12□□□□□ -0.47
CSNK1D-209ENST00000578904 OR4C45A6NMZ5 311 aa12.12□□□□□ -0.47
CSNK1D-209ENST00000578904 PRSS44E7EML9 344 aa12.12□□□□□ -0.47
CSNK1D-209ENST00000578904 H3BMQ9 156 aa12.12□□□□□ -0.47
CSNK1D-209ENST00000578904 C16orf97H3BN30 126 aa12.12□□□□□ -0.47
CSNK1D-209ENST00000578904 GABRPO00591 440 aa12.12□□□□□ -0.47
CSNK1D-209ENST00000578904 MTRF1O75570 445 aaKnown RBP12.12□□□□□ -0.47
CSNK1D-209ENST00000578904 ZFPL1O95159 310 aa12.12□□□□□ -0.47
CSNK1D-209ENST00000578904 RAF1P04049 648 aa12.12□□□□□ -0.47
CSNK1D-209ENST00000578904 SERPINA5P05154 406 aa12.12□□□□□ -0.47
CSNK1D-209ENST00000578904 PATE4P0C8F1 98 aa12.12□□□□□ -0.47
CSNK1D-209ENST00000578904 CBR1P16152 277 aa12.12□□□□□ -0.47
CSNK1D-209ENST00000578904 PPP3CBP16298 524 aa12.12□□□□□ -0.47
CSNK1D-209ENST00000578904 ACHEP22303 614 aa12.12□□□□□ -0.47
CSNK1D-209ENST00000578904 CRYGSP22914 178 aa12.12□□□□□ -0.47
CSNK1D-209ENST00000578904 CFL1P23528 166 aaKnown RBP12.12□□□□□ -0.47
CSNK1D-209ENST00000578904 MYL9P24844 172 aa12.12□□□□□ -0.47
CSNK1D-209ENST00000578904 GRNP28799 593 aaKnown RBP12.12□□□□□ -0.47
CSNK1D-209ENST00000578904 CRYBB2P43320 205 aa12.12□□□□□ -0.47
CSNK1D-209ENST00000578904 TSC22D1Q15714 1073 aa12.12□□□□□ -0.47
CSNK1D-209ENST00000578904 Q499Y3 187 aa12.12□□□□□ -0.47
CSNK1D-209ENST00000578904 ACSM3Q53FZ2 586 aa12.12□□□□□ -0.47
CSNK1D-209ENST00000578904 STAC2Q6ZMT1 411 aa12.12□□□□□ -0.47
CSNK1D-209ENST00000578904 SLC16A12Q6ZSM3 486 aa12.12□□□□□ -0.47
CSNK1D-209ENST00000578904 COMMD2Q86X83 199 aa12.12□□□□□ -0.47
CSNK1D-209ENST00000578904 ELMOD2Q8IZ81 293 aa12.12□□□□□ -0.47
CSNK1D-209ENST00000578904 FAM169BQ8N8A8 192 aa12.12□□□□□ -0.47
CSNK1D-209ENST00000578904 IL17RDQ8NFM7 739 aa12.12□□□□□ -0.47
CSNK1D-209ENST00000578904 TSEN15Q8WW01 171 aaKnown RBP12.12□□□□□ -0.47
CSNK1D-209ENST00000578904 PDCD1LG2Q9BQ51 273 aa12.12□□□□□ -0.47
CSNK1D-209ENST00000578904 SLITRK2Q9H156 845 aa12.12□□□□□ -0.47
CSNK1D-209ENST00000578904 RGCCQ9H4X1 137 aa12.12□□□□□ -0.47
CSNK1D-209ENST00000578904 BRD7Q9NPI1 651 aa12.12□□□□□ -0.47
CSNK1D-209ENST00000578904 B3GNT2Q9NY97 397 aa12.12□□□□□ -0.47
CSNK1D-209ENST00000578904 EIF3KQ9UBQ5 218 aaKnown RBP12.12□□□□□ -0.47
CSNK1D-209ENST00000578904 SIRT4Q9Y6E7 314 aaPredicted RBP12.12□□□□□ -0.47
CSNK1D-209ENST00000578904 A0A0U1RQV5 110 aa12.11□□□□□ -0.47
CSNK1D-209ENST00000578904 J3QW42 95 aa12.11□□□□□ -0.47
CSNK1D-209ENST00000578904 TBX1O43435 398 aa12.11□□□□□ -0.47
CSNK1D-209ENST00000578904 SRSF10O75494 262 aaKnown RBP12.11□□□□□ -0.47
CSNK1D-209ENST00000578904 GPX5O75715 221 aa12.11□□□□□ -0.47
CSNK1D-209ENST00000578904 PNPP00491 289 aa12.11□□□□□ -0.47
CSNK1D-209ENST00000578904 LCATP04180 440 aa12.11□□□□□ -0.47
CSNK1D-209ENST00000578904 ACSM4P0C7M7 580 aa12.11□□□□□ -0.47
CSNK1D-209ENST00000578904 OCM2P0CE71 109 aa12.11□□□□□ -0.47
CSNK1D-209ENST00000578904 CCKARP32238 428 aa12.11□□□□□ -0.47
CSNK1D-209ENST00000578904 UGT2B10P36537 528 aa12.11□□□□□ -0.47
CSNK1D-209ENST00000578904 RANBP1P43487 201 aa12.11□□□□□ -0.47
CSNK1D-209ENST00000578904 SERPINB10P48595 397 aa12.11□□□□□ -0.47
CSNK1D-209ENST00000578904 NANOS3P60323 173 aaKnown RBP12.11□□□□□ -0.47
CSNK1D-209ENST00000578904 LSM3P62310 102 aaKnown RBP12.11□□□□□ -0.47
CSNK1D-209ENST00000578904 SORDQ00796 357 aa12.11□□□□□ -0.47
CSNK1D-209ENST00000578904 FABP5Q01469 135 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms