RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 USE1Q9NZ43 259 aa18.89■□□□□ 0.61
SMARCD2-206ENST00000577990 CCDC182A6NF36 153 aa18.88■□□□□ 0.61
SMARCD2-206ENST00000577990 EI24O14681 340 aa18.88■□□□□ 0.61
SMARCD2-206ENST00000577990 TLX2O43763 284 aaPredicted RBP18.88■□□□□ 0.61
SMARCD2-206ENST00000577990 ALPLP05186 524 aa18.88■□□□□ 0.61
SMARCD2-206ENST00000577990 ADH4P08319 380 aa18.88■□□□□ 0.61
SMARCD2-206ENST00000577990 ACHEP22303 614 aa18.88■□□□□ 0.61
SMARCD2-206ENST00000577990 USF1P22415 310 aaPredicted RBP18.88■□□□□ 0.61
SMARCD2-206ENST00000577990 POLR2IP36954 125 aaKnown RBP18.88■□□□□ 0.61
SMARCD2-206ENST00000577990 NAA10P41227 235 aaPredicted RBP18.88■□□□□ 0.61
SMARCD2-206ENST00000577990 SLC15A1P46059 708 aa18.88■□□□□ 0.61
SMARCD2-206ENST00000577990 PRKXP51817 358 aa18.88■□□□□ 0.61
SMARCD2-206ENST00000577990 GRB2P62993 217 aaKnown RBP18.88■□□□□ 0.61
SMARCD2-206ENST00000577990 KRTAP1-1Q07627 177 aa18.88■□□□□ 0.61
SMARCD2-206ENST00000577990 RIN1Q13671 783 aa18.88■□□□□ 0.61
SMARCD2-206ENST00000577990 GGTLC2Q14390 218 aa18.88■□□□□ 0.61
SMARCD2-206ENST00000577990 OTOSQ8NHW6 89 aa18.88■□□□□ 0.61
SMARCD2-206ENST00000577990 RNF133Q8WVZ7 376 aa18.88■□□□□ 0.61
SMARCD2-206ENST00000577990 YIPF5Q969M3 257 aa18.88■□□□□ 0.61
SMARCD2-206ENST00000577990 DIRC2Q96SL1 478 aa18.88■□□□□ 0.61
SMARCD2-206ENST00000577990 CHODLQ9H9P2 273 aa18.88■□□□□ 0.61
SMARCD2-206ENST00000577990 ZDHHC8Q9ULC8 765 aa18.88■□□□□ 0.61
SMARCD2-206ENST00000577990 ORC6Q9Y5N6 252 aa18.88■□□□□ 0.61
SMARCD2-206ENST00000577990 TPD52L2O43399 206 aaKnown RBP18.87■□□□□ 0.61
SMARCD2-206ENST00000577990 COL8A2P25067 703 aa18.87■□□□□ 0.61
SMARCD2-206ENST00000577990 ALDH3A2P51648 485 aa18.87■□□□□ 0.61
SMARCD2-206ENST00000577990 EFNB1P98172 346 aa18.87■□□□□ 0.61
SMARCD2-206ENST00000577990 MALLQ13021 153 aa18.87■□□□□ 0.61
SMARCD2-206ENST00000577990 OR2T2Q6IF00 324 aa18.87■□□□□ 0.61
SMARCD2-206ENST00000577990 PQLC1Q8N2U9 271 aa18.87■□□□□ 0.61
SMARCD2-206ENST00000577990 AMELYQ99218 206 aa18.87■□□□□ 0.61
SMARCD2-206ENST00000577990 TEAD3Q99594 435 aa18.87■□□□□ 0.61
SMARCD2-206ENST00000577990 TOR3AQ9H497 397 aa18.87■□□□□ 0.61
SMARCD2-206ENST00000577990 SAP30LQ9HAJ7 183 aa18.87■□□□□ 0.61
SMARCD2-206ENST00000577990 LYNP07948 512 aa18.86■□□□□ 0.61
SMARCD2-206ENST00000577990 HSD11B1P28845 292 aa18.86■□□□□ 0.61
SMARCD2-206ENST00000577990 CDK5R2Q13319 367 aa18.86■□□□□ 0.61
SMARCD2-206ENST00000577990 NXNL2Q5VZ03 156 aa18.86■□□□□ 0.61
SMARCD2-206ENST00000577990 RHOUQ7L0Q8 258 aa18.86■□□□□ 0.61
SMARCD2-206ENST00000577990 SLC16A9Q7RTY1 509 aa18.86■□□□□ 0.61
SMARCD2-206ENST00000577990 BCDIN3DQ7Z5W3 292 aaKnown RBP18.86■□□□□ 0.61
SMARCD2-206ENST00000577990 OR5AS1Q8N127 324 aa18.86■□□□□ 0.61
SMARCD2-206ENST00000577990 CBR4Q8N4T8 237 aa18.86■□□□□ 0.61
SMARCD2-206ENST00000577990 ZNF283Q8N7M2 679 aa18.86■□□□□ 0.61
SMARCD2-206ENST00000577990 STMN2Q93045 179 aa18.86■□□□□ 0.61
SMARCD2-206ENST00000577990 EGLN1Q9GZT9 426 aa18.86■□□□□ 0.61
SMARCD2-206ENST00000577990 H2AFY2Q9P0M6 372 aaPredicted RBP18.86■□□□□ 0.61
SMARCD2-206ENST00000577990 IGHV4-61A0A0C4DH41 118 aa18.85■□□□□ 0.61
SMARCD2-206ENST00000577990 CDC14BO60729 498 aa18.85■□□□□ 0.61
SMARCD2-206ENST00000577990 RP2O75695 350 aa18.85■□□□□ 0.61
SMARCD2-206ENST00000577990 CD55P08174 381 aa18.85■□□□□ 0.61
SMARCD2-206ENST00000577990 SELEP16581 610 aa18.85■□□□□ 0.61
SMARCD2-206ENST00000577990 OPRL1P41146 370 aa18.85■□□□□ 0.61
SMARCD2-206ENST00000577990 CX3CR1P49238 355 aa18.85■□□□□ 0.61
SMARCD2-206ENST00000577990 RAD23AP54725 363 aa18.85■□□□□ 0.61
SMARCD2-206ENST00000577990 GK2Q14410 553 aaPredicted RBP18.85■□□□□ 0.61
SMARCD2-206ENST00000577990 TMEM249Q2WGJ8 235 aa18.85■□□□□ 0.61
SMARCD2-206ENST00000577990 SNAI3Q3KNW1 292 aa18.85■□□□□ 0.61
SMARCD2-206ENST00000577990 AADACL4Q5VUY2 407 aa18.85■□□□□ 0.61
SMARCD2-206ENST00000577990 Q6ZR03 302 aa18.85■□□□□ 0.61
SMARCD2-206ENST00000577990 USP51Q70EK9 711 aa18.85■□□□□ 0.61
SMARCD2-206ENST00000577990 MEPCEQ7L2J0 689 aaKnown RBP18.85■□□□□ 0.61
SMARCD2-206ENST00000577990 THEM6Q8WUY1 208 aa18.85■□□□□ 0.61
SMARCD2-206ENST00000577990 IL4I1Q96RQ9 567 aa18.85■□□□□ 0.61
SMARCD2-206ENST00000577990 C9orf16Q9BUW7 83 aa18.85■□□□□ 0.61
SMARCD2-206ENST00000577990 ZNF275Q9NSD4 429 aaPredicted RBP18.85■□□□□ 0.61
SMARCD2-206ENST00000577990 KLHDC2Q9Y2U9 406 aa18.85■□□□□ 0.61
SMARCD2-206ENST00000577990 DNHD1Q96M86 4753 aa18.85■□□□□ 0.61
SMARCD2-206ENST00000577990 IGHV1-69-2A0A0G2JMI3 117 aa18.84■□□□□ 0.61
SMARCD2-206ENST00000577990 SLC22A31A6NKX4 558 aa18.84■□□□□ 0.61
SMARCD2-206ENST00000577990 IQCF6A8MYZ5 107 aa18.84■□□□□ 0.61
SMARCD2-206ENST00000577990 APOC1P02654 83 aa18.84■□□□□ 0.61
SMARCD2-206ENST00000577990 MRPL3P09001 348 aaKnown RBP18.84■□□□□ 0.61
SMARCD2-206ENST00000577990 H2BFMP0C1H6 154 aa18.84■□□□□ 0.61
SMARCD2-206ENST00000577990 SLC2A1P11166 492 aa18.84■□□□□ 0.61
SMARCD2-206ENST00000577990 ANOS1P23352 680 aa18.84■□□□□ 0.61
SMARCD2-206ENST00000577990 TNFSF4P23510 183 aa18.84■□□□□ 0.61
SMARCD2-206ENST00000577990 CRYBB2P43320 205 aa18.84■□□□□ 0.61
SMARCD2-206ENST00000577990 PGAP1Q75T13 922 aa18.84■□□□□ 0.61
SMARCD2-206ENST00000577990 MRPL21Q7Z2W9 205 aaKnown RBP18.84■□□□□ 0.61
SMARCD2-206ENST00000577990 PRIMA1Q86XR5 153 aa18.84■□□□□ 0.61
SMARCD2-206ENST00000577990 GID4Q8IVV7 300 aa18.84■□□□□ 0.61
SMARCD2-206ENST00000577990 OR8G5Q8NG78 346 aa18.84■□□□□ 0.61
SMARCD2-206ENST00000577990 OR2Z1Q8NG97 314 aa18.84■□□□□ 0.61
SMARCD2-206ENST00000577990 ELMOD3Q96FG2 381 aa18.84■□□□□ 0.61
SMARCD2-206ENST00000577990 ZNF582Q96NG8 517 aaPredicted RBP18.84■□□□□ 0.61
SMARCD2-206ENST00000577990 CNN2Q99439 309 aaKnown RBP18.84■□□□□ 0.61
SMARCD2-206ENST00000577990 YIPF3Q9GZM5 350 aa18.84■□□□□ 0.61
SMARCD2-206ENST00000577990 LAMP5Q9UJQ1 280 aa18.84■□□□□ 0.61
SMARCD2-206ENST00000577990 YLPM1P49750 1951 aaKnown RBP18.84■□□□□ 0.61
SMARCD2-206ENST00000577990 ATRQ13535 2644 aa18.83■□□□□ 0.61
SMARCD2-206ENST00000577990 BAG2O95816 211 aa18.83■□□□□ 0.6
SMARCD2-206ENST00000577990 ANXA2P07355 339 aaKnown RBP18.83■□□□□ 0.6
SMARCD2-206ENST00000577990 ALOX5APP20292 161 aa18.83■□□□□ 0.6
SMARCD2-206ENST00000577990 GPR6P46095 362 aaPredicted RBP18.83■□□□□ 0.6
SMARCD2-206ENST00000577990 PRSS12P56730 875 aa18.83■□□□□ 0.6
SMARCD2-206ENST00000577990 TMEM33P57088 247 aa18.83■□□□□ 0.6
SMARCD2-206ENST00000577990 CDC42P60953 191 aa18.83■□□□□ 0.6
SMARCD2-206ENST00000577990 TNFAIP6P98066 277 aaPredicted RBP18.83■□□□□ 0.6
SMARCD2-206ENST00000577990 GABPB1Q06547 395 aaPredicted RBP18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms