RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 NXNL2Q5VZ03 156 aa16.43■□□□□ 0.22
SS18-208ENST00000577751 ZNF454Q8N9F8 522 aa16.43■□□□□ 0.22
SS18-208ENST00000577751 TOR3AQ9H497 397 aa16.43■□□□□ 0.22
SS18-208ENST00000577751 DECR2Q9NUI1 292 aa16.43■□□□□ 0.22
SS18-208ENST00000577751 E9PQ18 207 aa16.42■□□□□ 0.22
SS18-208ENST00000577751 M0R129 80 aa16.42■□□□□ 0.22
SS18-208ENST00000577751 EI24O14681 340 aa16.42■□□□□ 0.22
SS18-208ENST00000577751 TACSTD2P09758 323 aa16.42■□□□□ 0.22
SS18-208ENST00000577751 PRKXP51817 358 aa16.42■□□□□ 0.22
SS18-208ENST00000577751 TMEM33P57088 247 aa16.42■□□□□ 0.22
SS18-208ENST00000577751 RPS7P62081 194 aaKnown RBP16.42■□□□□ 0.22
SS18-208ENST00000577751 GK2Q14410 553 aaPredicted RBP16.42■□□□□ 0.22
SS18-208ENST00000577751 TAF13Q15543 124 aa16.42■□□□□ 0.22
SS18-208ENST00000577751 TMEM249Q2WGJ8 235 aa16.42■□□□□ 0.22
SS18-208ENST00000577751 SNAI3Q3KNW1 292 aa16.42■□□□□ 0.22
SS18-208ENST00000577751 OR2T2Q6IF00 324 aa16.42■□□□□ 0.22
SS18-208ENST00000577751 Q71RC1 249 aaPredicted RBP16.42■□□□□ 0.22
SS18-208ENST00000577751 BCDIN3DQ7Z5W3 292 aaKnown RBP16.42■□□□□ 0.22
SS18-208ENST00000577751 PQLC1Q8N2U9 271 aa16.42■□□□□ 0.22
SS18-208ENST00000577751 RIBC2Q9H4K1 309 aa16.42■□□□□ 0.22
SS18-208ENST00000577751 CSPG4Q6UVK1 2322 aa16.42■□□□□ 0.22
SS18-208ENST00000577751 IGHV4-61A0A0C4DH41 118 aa16.41■□□□□ 0.22
SS18-208ENST00000577751 IGHV1-69-2A0A0G2JMI3 117 aa16.41■□□□□ 0.22
SS18-208ENST00000577751 IQCF6A8MYZ5 107 aa16.41■□□□□ 0.22
SS18-208ENST00000577751 LYNP07948 512 aa16.41■□□□□ 0.22
SS18-208ENST00000577751 ALOX5APP20292 161 aa16.41■□□□□ 0.22
SS18-208ENST00000577751 OPRL1P41146 370 aa16.41■□□□□ 0.22
SS18-208ENST00000577751 NAA10P41227 235 aaPredicted RBP16.41■□□□□ 0.22
SS18-208ENST00000577751 SLC6A9P48067 706 aa16.41■□□□□ 0.22
SS18-208ENST00000577751 ALDH3A2P51648 485 aa16.41■□□□□ 0.22
SS18-208ENST00000577751 MALLQ13021 153 aa16.41■□□□□ 0.22
SS18-208ENST00000577751 GGTLC2Q14390 218 aa16.41■□□□□ 0.22
SS18-208ENST00000577751 USP51Q70EK9 711 aa16.41■□□□□ 0.22
SS18-208ENST00000577751 SPATC1Q76KD6 591 aa16.41■□□□□ 0.22
SS18-208ENST00000577751 MEPCEQ7L2J0 689 aaKnown RBP16.41■□□□□ 0.22
SS18-208ENST00000577751 SLC16A9Q7RTY1 509 aa16.41■□□□□ 0.22
SS18-208ENST00000577751 PRSS45Q7RTY3 260 aa16.41■□□□□ 0.22
SS18-208ENST00000577751 CBR4Q8N4T8 237 aa16.41■□□□□ 0.22
SS18-208ENST00000577751 OR8G5Q8NG78 346 aa16.41■□□□□ 0.22
SS18-208ENST00000577751 THEM6Q8WUY1 208 aa16.41■□□□□ 0.22
SS18-208ENST00000577751 SAP30LQ9HAJ7 183 aa16.41■□□□□ 0.22
SS18-208ENST00000577751 ZNF275Q9NSD4 429 aaPredicted RBP16.41■□□□□ 0.22
SS18-208ENST00000577751 ABCA1O95477 2261 aa16.4■□□□□ 0.22
SS18-208ENST00000577751 TANC2Q9HCD6 1990 aa16.4■□□□□ 0.22
SS18-208ENST00000577751 A0A1B0GWJ7 208 aa16.4■□□□□ 0.22
SS18-208ENST00000577751 C5orf63A6NC05 138 aa16.4■□□□□ 0.22
SS18-208ENST00000577751 CDC14BO60729 498 aa16.4■□□□□ 0.22
SS18-208ENST00000577751 LILRA1O75019 489 aa16.4■□□□□ 0.22
SS18-208ENST00000577751 SPRNQ5BIV9 151 aa16.4■□□□□ 0.22
SS18-208ENST00000577751 LCN1P1Q5VSP4 162 aa16.4■□□□□ 0.22
SS18-208ENST00000577751 ZNF283Q8N7M2 679 aa16.4■□□□□ 0.22
SS18-208ENST00000577751 IL4I1Q96RQ9 567 aa16.4■□□□□ 0.22
SS18-208ENST00000577751 SLC30A2Q9BRI3 323 aa16.4■□□□□ 0.22
SS18-208ENST00000577751 REPIN1Q9BWE0 567 aaKnown RBP16.4■□□□□ 0.22
SS18-208ENST00000577751 YIPF3Q9GZM5 350 aa16.4■□□□□ 0.22
SS18-208ENST00000577751 EGLN1Q9GZT9 426 aa16.4■□□□□ 0.22
SS18-208ENST00000577751 HAO2Q9NYQ3 351 aa16.4■□□□□ 0.22
SS18-208ENST00000577751 H2AFY2Q9P0M6 372 aaPredicted RBP16.4■□□□□ 0.22
SS18-208ENST00000577751 KLHDC2Q9Y2U9 406 aa16.4■□□□□ 0.22
SS18-208ENST00000577751 SLC22A31A6NKX4 558 aa16.39■□□□□ 0.21
SS18-208ENST00000577751 TPD52L2O43399 206 aaKnown RBP16.39■□□□□ 0.21
SS18-208ENST00000577751 CD5LO43866 347 aa16.39■□□□□ 0.21
SS18-208ENST00000577751 APOC1P02654 83 aa16.39■□□□□ 0.21
SS18-208ENST00000577751 SLC2A1P11166 492 aa16.39■□□□□ 0.21
SS18-208ENST00000577751 SELEP16581 610 aa16.39■□□□□ 0.21
SS18-208ENST00000577751 HSD11B1P28845 292 aa16.39■□□□□ 0.21
SS18-208ENST00000577751 CX3CR1P49238 355 aa16.39■□□□□ 0.21
SS18-208ENST00000577751 HCCSP53701 268 aa16.39■□□□□ 0.21
SS18-208ENST00000577751 RAD23AP54725 363 aa16.39■□□□□ 0.21
SS18-208ENST00000577751 TNFAIP6P98066 277 aaPredicted RBP16.39■□□□□ 0.21
SS18-208ENST00000577751 ZNF92Q03936 586 aa16.39■□□□□ 0.21
SS18-208ENST00000577751 GLYATL3Q5SZD4 288 aa16.39■□□□□ 0.21
SS18-208ENST00000577751 PGAP1Q75T13 922 aa16.39■□□□□ 0.21
SS18-208ENST00000577751 OR5AS1Q8N127 324 aa16.39■□□□□ 0.21
SS18-208ENST00000577751 OR2Z1Q8NG97 314 aa16.39■□□□□ 0.21
SS18-208ENST00000577751 ELMOD3Q96FG2 381 aa16.39■□□□□ 0.21
SS18-208ENST00000577751 HRASLS5Q96KN8 279 aa16.39■□□□□ 0.21
SS18-208ENST00000577751 ZNF582Q96NG8 517 aaPredicted RBP16.39■□□□□ 0.21
SS18-208ENST00000577751 SLC29A1Q99808 456 aa16.39■□□□□ 0.21
SS18-208ENST00000577751 C9orf16Q9BUW7 83 aa16.39■□□□□ 0.21
SS18-208ENST00000577751 ORC6Q9Y5N6 252 aa16.39■□□□□ 0.21
SS18-208ENST00000577751 H2BFMP0C1H6 154 aa16.38■□□□□ 0.21
SS18-208ENST00000577751 GPR6P46095 362 aaPredicted RBP16.38■□□□□ 0.21
SS18-208ENST00000577751 PRSS12P56730 875 aa16.38■□□□□ 0.21
SS18-208ENST00000577751 TRIP10Q15642 601 aa16.38■□□□□ 0.21
SS18-208ENST00000577751 MRPL21Q7Z2W9 205 aaKnown RBP16.38■□□□□ 0.21
SS18-208ENST00000577751 GID4Q8IVV7 300 aa16.38■□□□□ 0.21
SS18-208ENST00000577751 OR8J1Q8NGP2 316 aa16.38■□□□□ 0.21
SS18-208ENST00000577751 OR13G1Q8NGZ3 307 aa16.38■□□□□ 0.21
SS18-208ENST00000577751 OR2AE1Q8NHA4 323 aa16.38■□□□□ 0.21
SS18-208ENST00000577751 TRUB1Q8WWH5 349 aaKnown RBP16.38■□□□□ 0.21
SS18-208ENST00000577751 SPSB4Q96A44 273 aa16.38■□□□□ 0.21
SS18-208ENST00000577751 SP140LQ9H930 580 aa16.38■□□□□ 0.21
SS18-208ENST00000577751 IL19Q9UHD0 177 aa16.38■□□□□ 0.21
SS18-208ENST00000577751 LAMP5Q9UJQ1 280 aa16.38■□□□□ 0.21
SS18-208ENST00000577751 CACNG2Q9Y698 323 aa16.38■□□□□ 0.21
SS18-208ENST00000577751 TLN2Q9Y4G6 2542 aa16.37■□□□□ 0.21
SS18-208ENST00000577751 MLNRO43193 412 aa16.37■□□□□ 0.21
SS18-208ENST00000577751 XRCC2O43543 280 aa16.37■□□□□ 0.21
SS18-208ENST00000577751 MRPL3P09001 348 aaKnown RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms