RNA–Protein interactions for RNA: ENST00000577422.5

CUEDC1-203, Transcript of CUE domain containing 1, humanhuman

TSL 3

Gene CUEDC1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-203ENST00000577422 CYB5R1Q9UHQ9 305 aa11.29□□□□□ -0.6
CUEDC1-203ENST00000577422 C5orf63A6NC05 138 aa11.28□□□□□ -0.6
CUEDC1-203ENST00000577422 OR6C68A6NDL8 312 aa11.28□□□□□ -0.6
CUEDC1-203ENST00000577422 POM121CA8CG34 1229 aa11.28□□□□□ -0.6
CUEDC1-203ENST00000577422 HOXA3O43365 443 aaPredicted RBP11.28□□□□□ -0.6
CUEDC1-203ENST00000577422 PTBP3O95758 552 aaKnown RBP11.28□□□□□ -0.6
CUEDC1-203ENST00000577422 HIST1H1CP16403 213 aaKnown RBP11.28□□□□□ -0.6
CUEDC1-203ENST00000577422 FPR3P25089 353 aa11.28□□□□□ -0.6
CUEDC1-203ENST00000577422 CRABP1P29762 137 aa11.28□□□□□ -0.6
CUEDC1-203ENST00000577422 PITPNBP48739 271 aa11.28□□□□□ -0.6
CUEDC1-203ENST00000577422 NUDT2P50583 147 aa11.28□□□□□ -0.6
CUEDC1-203ENST00000577422 RELBQ01201 579 aa11.28□□□□□ -0.6
CUEDC1-203ENST00000577422 DEFB112Q30KQ8 113 aa11.28□□□□□ -0.6
CUEDC1-203ENST00000577422 RFX4Q33E94 735 aa11.28□□□□□ -0.6
CUEDC1-203ENST00000577422 PRAMEF6Q5VXH4 476 aa11.28□□□□□ -0.6
CUEDC1-203ENST00000577422 GLYATQ6IB77 296 aa11.28□□□□□ -0.6
CUEDC1-203ENST00000577422 PGM2L1Q6PCE3 622 aa11.28□□□□□ -0.6
CUEDC1-203ENST00000577422 BTNL3Q6UXE8 466 aa11.28□□□□□ -0.6
CUEDC1-203ENST00000577422 TREML4Q6UXN2 200 aa11.28□□□□□ -0.6
CUEDC1-203ENST00000577422 LINC00346Q8IVM7 164 aa11.28□□□□□ -0.6
CUEDC1-203ENST00000577422 CELF2-AS1Q8N7Q2 184 aa11.28□□□□□ -0.6
CUEDC1-203ENST00000577422 ZNRF4Q8WWF5 429 aa11.28□□□□□ -0.6
CUEDC1-203ENST00000577422 MAP6Q96JE9 813 aa11.28□□□□□ -0.6
CUEDC1-203ENST00000577422 ERMAPQ96PL5 475 aaPredicted RBP11.28□□□□□ -0.6
CUEDC1-203ENST00000577422 DDOQ99489 341 aa11.28□□□□□ -0.6
CUEDC1-203ENST00000577422 NUDT16L1Q9BRJ7 211 aaKnown RBP11.28□□□□□ -0.6
CUEDC1-203ENST00000577422 NDEL1Q9GZM8 345 aa11.28□□□□□ -0.6
CUEDC1-203ENST00000577422 SLITRK2Q9H156 845 aa11.28□□□□□ -0.6
CUEDC1-203ENST00000577422 OR52D1Q9H346 318 aa11.28□□□□□ -0.6
CUEDC1-203ENST00000577422 FN3KQ9H479 309 aa11.28□□□□□ -0.6
CUEDC1-203ENST00000577422 EFCAB1Q9HAE3 211 aa11.28□□□□□ -0.6
CUEDC1-203ENST00000577422 SRA1Q9HD15 236 aaKnown RBP11.28□□□□□ -0.6
CUEDC1-203ENST00000577422 TMEM100Q9NV29 134 aa11.28□□□□□ -0.6
CUEDC1-203ENST00000577422 ARGLU1Q9NWB6 273 aaPredicted RBP11.28□□□□□ -0.6
CUEDC1-203ENST00000577422 DOCK11Q5JSL3 2073 aa11.28□□□□□ -0.6
CUEDC1-203ENST00000577422 NOTCH1P46531 2555 aa11.27□□□□□ -0.6
CUEDC1-203ENST00000577422 PHYHO14832 338 aa11.27□□□□□ -0.61
CUEDC1-203ENST00000577422 FAM20BO75063 409 aa11.27□□□□□ -0.61
CUEDC1-203ENST00000577422 MMP9P14780 707 aa11.27□□□□□ -0.61
CUEDC1-203ENST00000577422 OMGP23515 440 aa11.27□□□□□ -0.61
CUEDC1-203ENST00000577422 MTNR1AP48039 350 aa11.27□□□□□ -0.61
CUEDC1-203ENST00000577422 PSME3P61289 254 aa11.27□□□□□ -0.61
CUEDC1-203ENST00000577422 FGF12P61328 243 aa11.27□□□□□ -0.61
CUEDC1-203ENST00000577422 SRSF4Q08170 494 aaKnown RBP11.27□□□□□ -0.61
CUEDC1-203ENST00000577422 TRAP1Q12931 704 aaKnown RBP11.27□□□□□ -0.61
CUEDC1-203ENST00000577422 SNAI3Q3KNW1 292 aa11.27□□□□□ -0.61
CUEDC1-203ENST00000577422 C16orf87Q6PH81 154 aa11.27□□□□□ -0.61
CUEDC1-203ENST00000577422 DNM1P34Q6PK57 102 aa11.27□□□□□ -0.61
CUEDC1-203ENST00000577422 DCDC5Q6ZRR9 648 aa11.27□□□□□ -0.61
CUEDC1-203ENST00000577422 OR8B3Q8NGG8 313 aa11.27□□□□□ -0.61
CUEDC1-203ENST00000577422 OR4K13Q8NH42 304 aa11.27□□□□□ -0.61
CUEDC1-203ENST00000577422 FANK1Q8TC84 345 aa11.27□□□□□ -0.61
CUEDC1-203ENST00000577422 TMIGD2Q96BF3 282 aa11.27□□□□□ -0.61
CUEDC1-203ENST00000577422 OR8B2Q96RD0 313 aa11.27□□□□□ -0.61
CUEDC1-203ENST00000577422 ATF6BQ99941 703 aa11.27□□□□□ -0.61
CUEDC1-203ENST00000577422 MYLK2Q9H1R3 596 aa11.27□□□□□ -0.61
CUEDC1-203ENST00000577422 RPRD1BQ9NQG5 326 aaKnown RBP11.27□□□□□ -0.61
CUEDC1-203ENST00000577422 CLN8Q9UBY8 286 aa11.27□□□□□ -0.61
CUEDC1-203ENST00000577422 TMCC3Q9ULS5 477 aa11.27□□□□□ -0.61
CUEDC1-203ENST00000577422 AURKCQ9UQB9 309 aa11.27□□□□□ -0.61
CUEDC1-203ENST00000577422 POLR1DQ9Y2S0 133 aa11.27□□□□□ -0.61
CUEDC1-203ENST00000577422 MMP24Q9Y5R2 645 aa11.27□□□□□ -0.61
CUEDC1-203ENST00000577422 LRRC30A6NM36 301 aa11.26□□□□□ -0.61
CUEDC1-203ENST00000577422 SRRM5B3KS81 715 aa11.26□□□□□ -0.61
CUEDC1-203ENST00000577422 F5H5K5 113 aa11.26□□□□□ -0.61
CUEDC1-203ENST00000577422 SFTPBP07988 381 aa11.26□□□□□ -0.61
CUEDC1-203ENST00000577422 OTX1P32242 354 aaPredicted RBP11.26□□□□□ -0.61
CUEDC1-203ENST00000577422 RPS27P42677 84 aaKnown RBP11.26□□□□□ -0.61
CUEDC1-203ENST00000577422 CENPAP49450 140 aa11.26□□□□□ -0.61
CUEDC1-203ENST00000577422 ZNF362Q5T0B9 420 aaPredicted RBP11.26□□□□□ -0.61
CUEDC1-203ENST00000577422 RUSC1-AS1Q66K80 236 aa11.26□□□□□ -0.61
CUEDC1-203ENST00000577422 Q6YL49 198 aa11.26□□□□□ -0.61
CUEDC1-203ENST00000577422 C1orf87Q8N0U7 546 aa11.26□□□□□ -0.61
CUEDC1-203ENST00000577422 SDR9C7Q8NEX9 313 aa11.26□□□□□ -0.61
CUEDC1-203ENST00000577422 ERGIC1Q969X5 290 aa11.26□□□□□ -0.61
CUEDC1-203ENST00000577422 SLCO4A1Q96BD0 722 aa11.26□□□□□ -0.61
CUEDC1-203ENST00000577422 PLEKHA8Q96JA3 519 aa11.26□□□□□ -0.61
CUEDC1-203ENST00000577422 TBX15Q96SF7 602 aa11.26□□□□□ -0.61
CUEDC1-203ENST00000577422 HCAR1Q9BXC0 346 aa11.26□□□□□ -0.61
CUEDC1-203ENST00000577422 GORASP2Q9H8Y8 452 aa11.26□□□□□ -0.61
CUEDC1-203ENST00000577422 SMURF1Q9HCE7 757 aa11.26□□□□□ -0.61
CUEDC1-203ENST00000577422 FAM181BA6NEQ2 426 aa11.25□□□□□ -0.61
CUEDC1-203ENST00000577422 CCDC22O60826 627 aa11.25□□□□□ -0.61
CUEDC1-203ENST00000577422 SLC6A6P31641 620 aa11.25□□□□□ -0.61
CUEDC1-203ENST00000577422 GSSP48637 474 aa11.25□□□□□ -0.61
CUEDC1-203ENST00000577422 ZNF92Q03936 586 aa11.25□□□□□ -0.61
CUEDC1-203ENST00000577422 ECH1Q13011 328 aa11.25□□□□□ -0.61
CUEDC1-203ENST00000577422 LYPD4Q6UWN0 246 aa11.25□□□□□ -0.61
CUEDC1-203ENST00000577422 ZNF620Q6ZNG0 422 aa11.25□□□□□ -0.61
CUEDC1-203ENST00000577422 SPATC1Q76KD6 591 aa11.25□□□□□ -0.61
CUEDC1-203ENST00000577422 NLRC3Q7RTR2 1065 aa11.25□□□□□ -0.61
CUEDC1-203ENST00000577422 RNF148Q8N7C7 305 aa11.25□□□□□ -0.61
CUEDC1-203ENST00000577422 WFDC12Q8WWY7 111 aa11.25□□□□□ -0.61
CUEDC1-203ENST00000577422 PITX2Q99697 317 aa11.25□□□□□ -0.61
CUEDC1-203ENST00000577422 UFSP2Q9NUQ7 469 aa11.25□□□□□ -0.61
CUEDC1-203ENST00000577422 SAMD4AQ9UPU9 718 aaKnown RBP11.25□□□□□ -0.61
CUEDC1-203ENST00000577422 FAM32AQ9Y421 112 aaKnown RBP11.25□□□□□ -0.61
CUEDC1-203ENST00000577422 CENPVL3A0A0U1RRI6 287 aa11.24□□□□□ -0.61
CUEDC1-203ENST00000577422 CD300LBA8K4G0 201 aa11.24□□□□□ -0.61
CUEDC1-203ENST00000577422 NDUFAB1O14561 156 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms