RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 APOBEC3DQ96AK3 386 aaPredicted RBP8.32□□□□□ -1.08
NPLOC4-220ENST00000576940 Q96M85 177 aa8.32□□□□□ -1.08
NPLOC4-220ENST00000576940 CGREF1Q99674 301 aa8.32□□□□□ -1.08
NPLOC4-220ENST00000576940 ECSITQ9BQ95 431 aa8.32□□□□□ -1.08
NPLOC4-220ENST00000576940 PPA2Q9H2U2 334 aa8.32□□□□□ -1.08
NPLOC4-220ENST00000576940 CNTD2Q9H8S5 307 aa8.32□□□□□ -1.08
NPLOC4-220ENST00000576940 AURKAIP1Q9NWT8 199 aaPredicted RBP8.32□□□□□ -1.08
NPLOC4-220ENST00000576940 RNF7Q9UBF6 113 aa8.32□□□□□ -1.08
NPLOC4-220ENST00000576940 FBLN5Q9UBX5 448 aa8.32□□□□□ -1.08
NPLOC4-220ENST00000576940 VPREB3Q9UKI3 123 aa8.32□□□□□ -1.08
NPLOC4-220ENST00000576940 NDUFAF1Q9Y375 327 aa8.32□□□□□ -1.08
NPLOC4-220ENST00000576940 ADAM18Q9Y3Q7 739 aa8.32□□□□□ -1.08
NPLOC4-220ENST00000576940 A0A1B0GWJ7 208 aa8.31□□□□□ -1.08
NPLOC4-220ENST00000576940 LGALS8O00214 317 aa8.31□□□□□ -1.08
NPLOC4-220ENST00000576940 DVL1O14640 695 aa8.31□□□□□ -1.08
NPLOC4-220ENST00000576940 SLC16A7O60669 478 aa8.31□□□□□ -1.08
NPLOC4-220ENST00000576940 GABRA5P31644 462 aa8.31□□□□□ -1.08
NPLOC4-220ENST00000576940 CD200P41217 278 aa8.31□□□□□ -1.08
NPLOC4-220ENST00000576940 YAP1P46937 504 aaKnown RBP8.31□□□□□ -1.08
NPLOC4-220ENST00000576940 RGS6P49758 472 aa8.31□□□□□ -1.08
NPLOC4-220ENST00000576940 ELF3P78545 371 aaPredicted RBP8.31□□□□□ -1.08
NPLOC4-220ENST00000576940 VMACQ2NL98 169 aa8.31□□□□□ -1.08
NPLOC4-220ENST00000576940 MESTQ5EB52 335 aa8.31□□□□□ -1.08
NPLOC4-220ENST00000576940 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.31□□□□□ -1.08
NPLOC4-220ENST00000576940 OAFQ86UD1 273 aa8.31□□□□□ -1.08
NPLOC4-220ENST00000576940 NRMQ8IXM6 262 aa8.31□□□□□ -1.08
NPLOC4-220ENST00000576940 PPP1R35Q8TAP8 253 aa8.31□□□□□ -1.08
NPLOC4-220ENST00000576940 RASSF5Q8WWW0 418 aa8.31□□□□□ -1.08
NPLOC4-220ENST00000576940 ERGIC1Q969X5 290 aa8.31□□□□□ -1.08
NPLOC4-220ENST00000576940 PPP1R14AQ96A00 147 aa8.31□□□□□ -1.08
NPLOC4-220ENST00000576940 SLCO4A1Q96BD0 722 aa8.31□□□□□ -1.08
NPLOC4-220ENST00000576940 CCDC28BQ9BUN5 200 aa8.31□□□□□ -1.08
NPLOC4-220ENST00000576940 SIRT7Q9NRC8 400 aa8.31□□□□□ -1.08
NPLOC4-220ENST00000576940 INTS9Q9NV88 658 aaKnown RBP8.31□□□□□ -1.08
NPLOC4-220ENST00000576940 NECAP2Q9NVZ3 263 aa8.31□□□□□ -1.08
NPLOC4-220ENST00000576940 ZNRD1Q9P1U0 126 aa8.31□□□□□ -1.08
NPLOC4-220ENST00000576940 RHCGQ9UBD6 479 aa8.31□□□□□ -1.08
NPLOC4-220ENST00000576940 GRHPRQ9UBQ7 328 aa8.31□□□□□ -1.08
NPLOC4-220ENST00000576940 TEX13CA0A0J9YWL9 993 aa8.3□□□□□ -1.08
NPLOC4-220ENST00000576940 A0A1B0GW55 424 aa8.3□□□□□ -1.08
NPLOC4-220ENST00000576940 PRSS37A4D1T9 235 aa8.3□□□□□ -1.08
NPLOC4-220ENST00000576940 BTBD17A6NE02 478 aa8.3□□□□□ -1.08
NPLOC4-220ENST00000576940 EFCAB9A8MZ26 197 aa8.3□□□□□ -1.08
NPLOC4-220ENST00000576940 J3QW42 95 aa8.3□□□□□ -1.08
NPLOC4-220ENST00000576940 FAM107AO95990 144 aa8.3□□□□□ -1.08
NPLOC4-220ENST00000576940 FBP1P09467 338 aa8.3□□□□□ -1.08
NPLOC4-220ENST00000576940 DUX4L2P0CJ85 424 aa8.3□□□□□ -1.08
NPLOC4-220ENST00000576940 DUX4L3P0CJ86 424 aa8.3□□□□□ -1.08
NPLOC4-220ENST00000576940 DUX4L4P0CJ87 422 aa8.3□□□□□ -1.08
NPLOC4-220ENST00000576940 DUX4L5P0CJ88 424 aa8.3□□□□□ -1.08
NPLOC4-220ENST00000576940 DUX4L6P0CJ89 424 aa8.3□□□□□ -1.08
NPLOC4-220ENST00000576940 DUX4L7P0CJ90 424 aa8.3□□□□□ -1.08
NPLOC4-220ENST00000576940 ZNF26P17031 533 aaPredicted RBP8.3□□□□□ -1.08
NPLOC4-220ENST00000576940 CA6P23280 308 aa8.3□□□□□ -1.08
NPLOC4-220ENST00000576940 RPL4P36578 427 aaKnown RBP8.3□□□□□ -1.08
NPLOC4-220ENST00000576940 LSM6P62312 80 aaKnown RBP8.3□□□□□ -1.08
NPLOC4-220ENST00000576940 ST3GAL3Q11203 375 aa8.3□□□□□ -1.08
NPLOC4-220ENST00000576940 GK2Q14410 553 aaPredicted RBP8.3□□□□□ -1.08
NPLOC4-220ENST00000576940 KCNJ8Q15842 424 aa8.3□□□□□ -1.08
NPLOC4-220ENST00000576940 MEP1BQ16820 701 aa8.3□□□□□ -1.08
NPLOC4-220ENST00000576940 CDONQ4KMG0 1287 aa8.3□□□□□ -1.08
NPLOC4-220ENST00000576940 C11orf87Q6NUJ2 197 aa8.3□□□□□ -1.08
NPLOC4-220ENST00000576940 CORO6Q6QEF8 472 aa8.3□□□□□ -1.08
NPLOC4-220ENST00000576940 DUX4L9Q6RFH8 374 aaPredicted RBP8.3□□□□□ -1.08
NPLOC4-220ENST00000576940 ZNF826PQ6ZT77 177 aa8.3□□□□□ -1.08
NPLOC4-220ENST00000576940 PNKDQ8N490 385 aa8.3□□□□□ -1.08
NPLOC4-220ENST00000576940 GALNT4Q8N4A0 578 aa8.3□□□□□ -1.08
NPLOC4-220ENST00000576940 DPP10Q8N608 796 aa8.3□□□□□ -1.08
NPLOC4-220ENST00000576940 CELF2-AS1Q8N7Q2 184 aa8.3□□□□□ -1.08
NPLOC4-220ENST00000576940 OR13C2Q8NGS9 318 aa8.3□□□□□ -1.08
NPLOC4-220ENST00000576940 ST8SIA4Q92187 359 aa8.3□□□□□ -1.08
NPLOC4-220ENST00000576940 HCAR1Q9BXC0 346 aa8.3□□□□□ -1.08
NPLOC4-220ENST00000576940 POLR2J2Q9GZM3 115 aaKnown RBP8.3□□□□□ -1.08
NPLOC4-220ENST00000576940 POLR2J3Q9H1A7 115 aaKnown RBP8.3□□□□□ -1.08
NPLOC4-220ENST00000576940 NKIRAS1Q9NYS0 192 aa8.3□□□□□ -1.08
NPLOC4-220ENST00000576940 DUX4Q9UBX2 424 aa8.3□□□□□ -1.08
NPLOC4-220ENST00000576940 RPUSD1Q9UJJ7 312 aaKnown RBP8.3□□□□□ -1.08
NPLOC4-220ENST00000576940 RPS6KA6Q9UK32 745 aa8.3□□□□□ -1.08
NPLOC4-220ENST00000576940 BAG5Q9UL15 447 aa8.3□□□□□ -1.08
NPLOC4-220ENST00000576940 A4GNTQ9UNA3 340 aa8.3□□□□□ -1.08
NPLOC4-220ENST00000576940 IGHV3OR15-7A0A075B7D8 119 aa8.29□□□□□ -1.08
NPLOC4-220ENST00000576940 TRAV38-1A0A0B4J264 116 aa8.29□□□□□ -1.08
NPLOC4-220ENST00000576940 OOEPA6NGQ2 149 aa8.29□□□□□ -1.08
NPLOC4-220ENST00000576940 F5H5K5 113 aa8.29□□□□□ -1.08
NPLOC4-220ENST00000576940 RNASEK-C17orf49H0YIS7 233 aa8.29□□□□□ -1.08
NPLOC4-220ENST00000576940 XKRYO14609 159 aa8.29□□□□□ -1.08
NPLOC4-220ENST00000576940 NDUFA2O43678 99 aa8.29□□□□□ -1.08
NPLOC4-220ENST00000576940 KHDRBS3O75525 346 aaKnown RBP8.29□□□□□ -1.08
NPLOC4-220ENST00000576940 CD14P08571 375 aa8.29□□□□□ -1.08
NPLOC4-220ENST00000576940 SLC9A3P48764 834 aa8.29□□□□□ -1.08
NPLOC4-220ENST00000576940 CENPAP49450 140 aa8.29□□□□□ -1.08
NPLOC4-220ENST00000576940 EFNB2P52799 333 aa8.29□□□□□ -1.08
NPLOC4-220ENST00000576940 GYS2P54840 703 aa8.29□□□□□ -1.08
NPLOC4-220ENST00000576940 GNGT1P63211 74 aa8.29□□□□□ -1.08
NPLOC4-220ENST00000576940 HIST1H3AP68431 136 aa8.29□□□□□ -1.08
NPLOC4-220ENST00000576940 PRKCDQ05655 676 aa8.29□□□□□ -1.08
NPLOC4-220ENST00000576940 NFYCQ13952 458 aa8.29□□□□□ -1.08
NPLOC4-220ENST00000576940 OR8G1Q15617 311 aa8.29□□□□□ -1.08
NPLOC4-220ENST00000576940 NSUN5P1Q3KNT7 163 aa8.29□□□□□ -1.08
NPLOC4-220ENST00000576940 HIST2H3PS2Q5TEC6 136 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms