RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 EIF3KQ9UBQ5 218 aaKnown RBP5.25□□□□□ -1.57
NUP88-212ENST00000576708 OPN4Q9UHM6 478 aa5.25□□□□□ -1.57
NUP88-212ENST00000576708 KLHL21Q9UJP4 597 aa5.25□□□□□ -1.57
NUP88-212ENST00000576708 SLC45A2Q9UMX9 530 aa5.25□□□□□ -1.57
NUP88-212ENST00000576708 ADAM18Q9Y3Q7 739 aa5.25□□□□□ -1.57
NUP88-212ENST00000576708 A0A0G2JMP0 313 aa5.24□□□□□ -1.57
NUP88-212ENST00000576708 A0A0X1KG70 313 aa5.24□□□□□ -1.57
NUP88-212ENST00000576708 EFCAB9A8MZ26 197 aa5.24□□□□□ -1.57
NUP88-212ENST00000576708 FAM220BPB1ANY3 271 aa5.24□□□□□ -1.57
NUP88-212ENST00000576708 H3BUI4 141 aa5.24□□□□□ -1.57
NUP88-212ENST00000576708 CDC42EP2O14613 210 aa5.24□□□□□ -1.57
NUP88-212ENST00000576708 TIMM8AO60220 97 aaPredicted RBP5.24□□□□□ -1.57
NUP88-212ENST00000576708 IGF2P01344 180 aa5.24□□□□□ -1.57
NUP88-212ENST00000576708 IGHMP01871 453 aa5.24□□□□□ -1.57
NUP88-212ENST00000576708 MT-ND5P03915 603 aa5.24□□□□□ -1.57
NUP88-212ENST00000576708 CST2P09228 141 aa5.24□□□□□ -1.57
NUP88-212ENST00000576708 THRBP10828 461 aa5.24□□□□□ -1.57
NUP88-212ENST00000576708 ATP6V1B1P15313 513 aa5.24□□□□□ -1.57
NUP88-212ENST00000576708 MSR1P21757 451 aa5.24□□□□□ -1.57
NUP88-212ENST00000576708 ATP6V1E1P36543 226 aa5.24□□□□□ -1.57
NUP88-212ENST00000576708 GPR4P46093 362 aa5.24□□□□□ -1.57
NUP88-212ENST00000576708 HILS1P60008 231 aa5.24□□□□□ -1.57
NUP88-212ENST00000576708 SEC61A1P61619 476 aaKnown RBP5.24□□□□□ -1.57
NUP88-212ENST00000576708 SELENOWP63302 87 aa5.24□□□□□ -1.57
NUP88-212ENST00000576708 TNFAIP6P98066 277 aaPredicted RBP5.24□□□□□ -1.57
NUP88-212ENST00000576708 ST3GAL3Q11203 375 aa5.24□□□□□ -1.57
NUP88-212ENST00000576708 PSG7Q13046 419 aa5.24□□□□□ -1.57
NUP88-212ENST00000576708 MOGQ16653 247 aa5.24□□□□□ -1.57
NUP88-212ENST00000576708 DCAF12L2Q5VW00 463 aa5.24□□□□□ -1.57
NUP88-212ENST00000576708 C1orf94Q6P1W5 598 aa5.24□□□□□ -1.57
NUP88-212ENST00000576708 ERICH5Q6P6B1 374 aa5.24□□□□□ -1.57
NUP88-212ENST00000576708 Q6ZR03 302 aa5.24□□□□□ -1.57
NUP88-212ENST00000576708 FOXL2NBQ6ZUU3 175 aa5.24□□□□□ -1.57
NUP88-212ENST00000576708 BTN2A1Q7KYR7 527 aa5.24□□□□□ -1.57
NUP88-212ENST00000576708 HDDC2Q7Z4H3 204 aa5.24□□□□□ -1.57
NUP88-212ENST00000576708 C1QL2Q7Z5L3 287 aa5.24□□□□□ -1.57
NUP88-212ENST00000576708 TSEN54Q7Z6J9 526 aaKnown RBP5.24□□□□□ -1.57
NUP88-212ENST00000576708 ZDHHC22Q8N966 263 aa5.24□□□□□ -1.57
NUP88-212ENST00000576708 OR2T12Q8NG77 320 aa5.24□□□□□ -1.57
NUP88-212ENST00000576708 OR4M2Q8NGB6 313 aa5.24□□□□□ -1.57
NUP88-212ENST00000576708 TBC1D15Q8TC07 691 aa5.24□□□□□ -1.57
NUP88-212ENST00000576708 TAF15Q92804 592 aaKnown RBP eCLIP5.24□□□□□ -1.57
NUP88-212ENST00000576708 RAB39BQ96DA2 213 aa5.24□□□□□ -1.57
NUP88-212ENST00000576708 ELMOD3Q96FG2 381 aa5.24□□□□□ -1.57
NUP88-212ENST00000576708 C4orf45Q96LM5 186 aa5.24□□□□□ -1.57
NUP88-212ENST00000576708 PRRC1Q96M27 445 aa5.24□□□□□ -1.57
NUP88-212ENST00000576708 Q96M85 177 aa5.24□□□□□ -1.57
NUP88-212ENST00000576708 DUX5Q96PT3 197 aa5.24□□□□□ -1.57
NUP88-212ENST00000576708 SH3GL1Q99961 368 aa5.24□□□□□ -1.57
NUP88-212ENST00000576708 GAL3ST1Q99999 423 aa5.24□□□□□ -1.57
NUP88-212ENST00000576708 NUDT16L1Q9BRJ7 211 aaKnown RBP5.24□□□□□ -1.57
NUP88-212ENST00000576708 ALG12Q9BV10 488 aa5.24□□□□□ -1.57
NUP88-212ENST00000576708 SMURF2Q9HAU4 748 aa5.24□□□□□ -1.57
NUP88-212ENST00000576708 POLE4Q9NR33 117 aa5.24□□□□□ -1.57
NUP88-212ENST00000576708 MMP26Q9NRE1 261 aa5.24□□□□□ -1.57
NUP88-212ENST00000576708 ARMCX1Q9P291 453 aa5.24□□□□□ -1.57
NUP88-212ENST00000576708 STARD10Q9Y365 291 aa5.24□□□□□ -1.57
NUP88-212ENST00000576708 PPIAL4AQ9Y536 164 aa5.24□□□□□ -1.57
NUP88-212ENST00000576708 TIMM10BQ9Y5J6 103 aa5.24□□□□□ -1.57
NUP88-212ENST00000576708 SOX21Q9Y651 276 aaPredicted RBP5.24□□□□□ -1.57
NUP88-212ENST00000576708 NBEAL1Q6ZS30 2694 aa5.24□□□□□ -1.57
NUP88-212ENST00000576708 A0A087WUU8 490 aa5.23□□□□□ -1.57
NUP88-212ENST00000576708 IGHV3-64DA0A0J9YX35 117 aa5.23□□□□□ -1.57
NUP88-212ENST00000576708 PLSCR5A0PG75 271 aa5.23□□□□□ -1.57
NUP88-212ENST00000576708 ELOVL7A1L3X0 281 aa5.23□□□□□ -1.57
NUP88-212ENST00000576708 TMEM89A2RUT3 159 aa5.23□□□□□ -1.57
NUP88-212ENST00000576708 NPIPB13A6NJU9 1138 aa5.23□□□□□ -1.57
NUP88-212ENST00000576708 BBIP1A8MTZ0 92 aa5.23□□□□□ -1.57
NUP88-212ENST00000576708 C12orf71A8MTZ7 269 aa5.23□□□□□ -1.57
NUP88-212ENST00000576708 NPIPB4C9JG80 1138 aa5.23□□□□□ -1.57
NUP88-212ENST00000576708 TRAPPC2LH3BP13 241 aa5.23□□□□□ -1.57
NUP88-212ENST00000576708 TRIM77I1YAP6 450 aa5.23□□□□□ -1.57
NUP88-212ENST00000576708 SLC16A6O15403 523 aa5.23□□□□□ -1.57
NUP88-212ENST00000576708 DOK2O60496 412 aa5.23□□□□□ -1.57
NUP88-212ENST00000576708 ZNF682O95780 498 aa5.23□□□□□ -1.57
NUP88-212ENST00000576708 ABHD16AO95870 558 aa5.23□□□□□ -1.57
NUP88-212ENST00000576708 GPANK1O95872 356 aa5.23□□□□□ -1.57
NUP88-212ENST00000576708 FSHBP01225 129 aa5.23□□□□□ -1.57
NUP88-212ENST00000576708 IFNA14P01570 189 aa5.23□□□□□ -1.57
NUP88-212ENST00000576708 IGHV2-70P01814 119 aa5.23□□□□□ -1.57
NUP88-212ENST00000576708 ANPEPP15144 967 aa5.23□□□□□ -1.57
NUP88-212ENST00000576708 H2AFXP16104 143 aaPredicted RBP5.23□□□□□ -1.57
NUP88-212ENST00000576708 NCK1P16333 377 aa5.23□□□□□ -1.57
NUP88-212ENST00000576708 CTLA4P16410 223 aa5.23□□□□□ -1.57
NUP88-212ENST00000576708 EGR1P18146 543 aa5.23□□□□□ -1.57
NUP88-212ENST00000576708 RPL4P36578 427 aaKnown RBP5.23□□□□□ -1.57
NUP88-212ENST00000576708 HTR5AP47898 357 aa5.23□□□□□ -1.57
NUP88-212ENST00000576708 SLC9A3P48764 834 aa5.23□□□□□ -1.57
NUP88-212ENST00000576708 LIPEQ05469 1076 aa5.23□□□□□ -1.57
NUP88-212ENST00000576708 PRKCDQ05655 676 aa5.23□□□□□ -1.57
NUP88-212ENST00000576708 TRAM2Q15035 370 aa5.23□□□□□ -1.57
NUP88-212ENST00000576708 MESTQ5EB52 335 aa5.23□□□□□ -1.57
NUP88-212ENST00000576708 MTX3Q5HYI7 312 aa5.23□□□□□ -1.57
NUP88-212ENST00000576708 COQ5Q5HYK3 327 aa5.23□□□□□ -1.57
NUP88-212ENST00000576708 ZNF730Q6ZMV8 503 aa5.23□□□□□ -1.57
NUP88-212ENST00000576708 OVCH2Q7RTZ1 564 aa5.23□□□□□ -1.57
NUP88-212ENST00000576708 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.23□□□□□ -1.57
NUP88-212ENST00000576708 OAFQ86UD1 273 aa5.23□□□□□ -1.57
NUP88-212ENST00000576708 SLC15A3Q8IY34 581 aa5.23□□□□□ -1.57
NUP88-212ENST00000576708 OR5AS1Q8N127 324 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms