RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 SLC22A4Q9H015 551 aa9.64□□□□□ -0.87
CTDNEP1-212ENST00000576613 C16orf95Q9H693 158 aa9.64□□□□□ -0.87
CTDNEP1-212ENST00000576613 UFSP2Q9NUQ7 469 aa9.64□□□□□ -0.87
CTDNEP1-212ENST00000576613 RHCGQ9UBD6 479 aa9.64□□□□□ -0.87
CTDNEP1-212ENST00000576613 RNF7Q9UBF6 113 aa9.64□□□□□ -0.87
CTDNEP1-212ENST00000576613 CTSZQ9UBR2 303 aa9.64□□□□□ -0.87
CTDNEP1-212ENST00000576613 TMEM5Q9Y2B1 443 aa9.64□□□□□ -0.87
CTDNEP1-212ENST00000576613 CAB39Q9Y376 341 aaPredicted RBP9.64□□□□□ -0.87
CTDNEP1-212ENST00000576613 FAM96BQ9Y3D0 163 aa9.64□□□□□ -0.87
CTDNEP1-212ENST00000576613 TRAV38-1A0A0B4J264 116 aa9.63□□□□□ -0.87
CTDNEP1-212ENST00000576613 LGALS8O00214 317 aa9.63□□□□□ -0.87
CTDNEP1-212ENST00000576613 CDC42EP2O14613 210 aa9.63□□□□□ -0.87
CTDNEP1-212ENST00000576613 ECDO95905 644 aaPredicted RBP9.63□□□□□ -0.87
CTDNEP1-212ENST00000576613 YAP1P46937 504 aaKnown RBP9.63□□□□□ -0.87
CTDNEP1-212ENST00000576613 CENPAP49450 140 aa9.63□□□□□ -0.87
CTDNEP1-212ENST00000576613 HIST1H3AP68431 136 aa9.63□□□□□ -0.87
CTDNEP1-212ENST00000576613 GK2Q14410 553 aaPredicted RBP9.63□□□□□ -0.87
CTDNEP1-212ENST00000576613 OR8G1Q15617 311 aa9.63□□□□□ -0.87
CTDNEP1-212ENST00000576613 OR8B8Q15620 311 aa9.63□□□□□ -0.87
CTDNEP1-212ENST00000576613 KCNMB1Q16558 191 aa9.63□□□□□ -0.87
CTDNEP1-212ENST00000576613 C11orf91Q3C1V1 193 aa9.63□□□□□ -0.87
CTDNEP1-212ENST00000576613 BEND6Q5SZJ8 279 aaPredicted RBP9.63□□□□□ -0.87
CTDNEP1-212ENST00000576613 HIST2H3PS2Q5TEC6 136 aa9.63□□□□□ -0.87
CTDNEP1-212ENST00000576613 PRAMEF6Q5VXH4 476 aa9.63□□□□□ -0.87
CTDNEP1-212ENST00000576613 SFRP4Q6FHJ7 346 aaPredicted RBP9.63□□□□□ -0.87
CTDNEP1-212ENST00000576613 DNM1P34Q6PK57 102 aa9.63□□□□□ -0.87
CTDNEP1-212ENST00000576613 Q6ZSV7 163 aa9.63□□□□□ -0.87
CTDNEP1-212ENST00000576613 MBOAT2Q6ZWT7 520 aa9.63□□□□□ -0.87
CTDNEP1-212ENST00000576613 HIST2H3AQ71DI3 136 aa9.63□□□□□ -0.87
CTDNEP1-212ENST00000576613 BOLLQ8N9W6 283 aaKnown RBP9.63□□□□□ -0.87
CTDNEP1-212ENST00000576613 SPRYD4Q8WW59 207 aaPredicted RBP9.63□□□□□ -0.87
CTDNEP1-212ENST00000576613 NUAK2Q9H093 628 aa9.63□□□□□ -0.87
CTDNEP1-212ENST00000576613 SIRPDQ9H106 197 aa9.63□□□□□ -0.87
CTDNEP1-212ENST00000576613 SMURF1Q9HCE7 757 aa9.63□□□□□ -0.87
CTDNEP1-212ENST00000576613 VSX1Q9NZR4 365 aaPredicted RBP9.63□□□□□ -0.87
CTDNEP1-212ENST00000576613 RPS6KA6Q9UK32 745 aa9.63□□□□□ -0.87
CTDNEP1-212ENST00000576613 LHFPL6Q9Y693 200 aa9.63□□□□□ -0.87
CTDNEP1-212ENST00000576613 TET2Q6N021 2002 aaPredicted RBP9.63□□□□□ -0.87
CTDNEP1-212ENST00000576613 A0A087WUU8 490 aa9.62□□□□□ -0.87
CTDNEP1-212ENST00000576613 A0A1B0GVI7 797 aa9.62□□□□□ -0.87
CTDNEP1-212ENST00000576613 OOEPA6NGQ2 149 aa9.62□□□□□ -0.87
CTDNEP1-212ENST00000576613 FAM220BPB1ANY3 271 aa9.62□□□□□ -0.87
CTDNEP1-212ENST00000576613 FXYD1O00168 92 aa9.62□□□□□ -0.87
CTDNEP1-212ENST00000576613 SOCS2O14508 198 aa9.62□□□□□ -0.87
CTDNEP1-212ENST00000576613 NDUFB2O95178 105 aa9.62□□□□□ -0.87
CTDNEP1-212ENST00000576613 FBP1P09467 338 aa9.62□□□□□ -0.87
CTDNEP1-212ENST00000576613 CRABP1P29762 137 aa9.62□□□□□ -0.87
CTDNEP1-212ENST00000576613 PRSS12P56730 875 aa9.62□□□□□ -0.87
CTDNEP1-212ENST00000576613 ARF6P62330 175 aa9.62□□□□□ -0.87
CTDNEP1-212ENST00000576613 COX10Q12887 443 aa9.62□□□□□ -0.87
CTDNEP1-212ENST00000576613 ECH1Q13011 328 aa9.62□□□□□ -0.87
CTDNEP1-212ENST00000576613 MPPED2Q15777 294 aa9.62□□□□□ -0.87
CTDNEP1-212ENST00000576613 COQ5Q5HYK3 327 aa9.62□□□□□ -0.87
CTDNEP1-212ENST00000576613 AGBL2Q5U5Z8 902 aa9.62□□□□□ -0.87
CTDNEP1-212ENST00000576613 METTL21CQ5VZV1 264 aa9.62□□□□□ -0.87
CTDNEP1-212ENST00000576613 COLCA1Q6ZS62 124 aa9.62□□□□□ -0.87
CTDNEP1-212ENST00000576613 PGAP1Q75T13 922 aa9.62□□□□□ -0.87
CTDNEP1-212ENST00000576613 MRPL21Q7Z2W9 205 aaKnown RBP9.62□□□□□ -0.87
CTDNEP1-212ENST00000576613 REC114Q7Z4M0 266 aa9.62□□□□□ -0.87
CTDNEP1-212ENST00000576613 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.62□□□□□ -0.87
CTDNEP1-212ENST00000576613 GALNT4Q8N4A0 578 aa9.62□□□□□ -0.87
CTDNEP1-212ENST00000576613 PLPP7Q8NBV4 271 aa9.62□□□□□ -0.87
CTDNEP1-212ENST00000576613 OR2T12Q8NG77 320 aa9.62□□□□□ -0.87
CTDNEP1-212ENST00000576613 NPRL2Q8WTW4 380 aa9.62□□□□□ -0.87
CTDNEP1-212ENST00000576613 SIKE1Q9BRV8 207 aa9.62□□□□□ -0.87
CTDNEP1-212ENST00000576613 ADAT1Q9BUB4 502 aaKnown RBP9.62□□□□□ -0.87
CTDNEP1-212ENST00000576613 NRIP3Q9NQ35 241 aa9.62□□□□□ -0.87
CTDNEP1-212ENST00000576613 MRGBPQ9NV56 204 aa9.62□□□□□ -0.87
CTDNEP1-212ENST00000576613 VPREB3Q9UKI3 123 aa9.62□□□□□ -0.87
CTDNEP1-212ENST00000576613 AURKCQ9UQB9 309 aa9.62□□□□□ -0.87
CTDNEP1-212ENST00000576613 KPTNQ9Y664 436 aa9.62□□□□□ -0.87
CTDNEP1-212ENST00000576613 BBIP1A8MTZ0 92 aa9.61□□□□□ -0.87
CTDNEP1-212ENST00000576613 F5H5K5 113 aa9.61□□□□□ -0.87
CTDNEP1-212ENST00000576613 J3KTA2 159 aa9.61□□□□□ -0.87
CTDNEP1-212ENST00000576613 MRASO14807 208 aa9.61□□□□□ -0.87
CTDNEP1-212ENST00000576613 FFAR1O14842 300 aa9.61□□□□□ -0.87
CTDNEP1-212ENST00000576613 PIN1P1O15428 100 aa9.61□□□□□ -0.87
CTDNEP1-212ENST00000576613 GMDSO60547 372 aa9.61□□□□□ -0.87
CTDNEP1-212ENST00000576613 TSPAN9O75954 239 aa9.61□□□□□ -0.87
CTDNEP1-212ENST00000576613 LCATP04180 440 aa9.61□□□□□ -0.87
CTDNEP1-212ENST00000576613 ACSM4P0C7M7 580 aa9.61□□□□□ -0.87
CTDNEP1-212ENST00000576613 ZNF26P17031 533 aaPredicted RBP9.61□□□□□ -0.87
CTDNEP1-212ENST00000576613 FUT4P22083 530 aa9.61□□□□□ -0.87
CTDNEP1-212ENST00000576613 CA6P23280 308 aa9.61□□□□□ -0.87
CTDNEP1-212ENST00000576613 TGFBR2P37173 567 aa9.61□□□□□ -0.87
CTDNEP1-212ENST00000576613 RPS6KA3P51812 740 aa9.61□□□□□ -0.87
CTDNEP1-212ENST00000576613 EGR3Q06889 387 aa9.61□□□□□ -0.87
CTDNEP1-212ENST00000576613 MEP1BQ16820 701 aa9.61□□□□□ -0.87
CTDNEP1-212ENST00000576613 BEAN1Q3B7T3 259 aa9.61□□□□□ -0.87
CTDNEP1-212ENST00000576613 CDONQ4KMG0 1287 aa9.61□□□□□ -0.87
CTDNEP1-212ENST00000576613 CORO6Q6QEF8 472 aa9.61□□□□□ -0.87
CTDNEP1-212ENST00000576613 BTN2A1Q7KYR7 527 aa9.61□□□□□ -0.87
CTDNEP1-212ENST00000576613 PDZD9Q8IXQ8 264 aa9.61□□□□□ -0.87
CTDNEP1-212ENST00000576613 PIP4P2Q8N4L2 257 aa9.61□□□□□ -0.87
CTDNEP1-212ENST00000576613 SLCO4A1Q96BD0 722 aa9.61□□□□□ -0.87
CTDNEP1-212ENST00000576613 FAM46AQ96IP4 442 aaKnown RBP9.61□□□□□ -0.87
CTDNEP1-212ENST00000576613 GPX7Q96SL4 187 aaPredicted RBP9.61□□□□□ -0.87
CTDNEP1-212ENST00000576613 PITX2Q99697 317 aa9.61□□□□□ -0.87
CTDNEP1-212ENST00000576613 ATF6BQ99941 703 aa9.61□□□□□ -0.87
CTDNEP1-212ENST00000576613 ANKRD19PQ9H560 264 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms