RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 IL1RAPQ9NPH3 570 aa17.71■□□□□ 0.43
CHRNB1-206ENST00000574054 MIOXQ9UGB7 285 aa17.71■□□□□ 0.43
CHRNB1-206ENST00000574054 CD300AQ9UGN4 299 aa17.71■□□□□ 0.43
CHRNB1-206ENST00000574054 MGAM2Q2M2H8 2515 aa17.71■□□□□ 0.43
CHRNB1-206ENST00000574054 IRF2P14316 349 aa17.7■□□□□ 0.42
CHRNB1-206ENST00000574054 PYCR1P32322 319 aa17.7■□□□□ 0.42
CHRNB1-206ENST00000574054 CD80P33681 288 aa17.7■□□□□ 0.42
CHRNB1-206ENST00000574054 GGT2P36268 569 aa17.7■□□□□ 0.42
CHRNB1-206ENST00000574054 GNB2P62879 340 aa17.7■□□□□ 0.42
CHRNB1-206ENST00000574054 MXRA7P84157 204 aa17.7■□□□□ 0.42
CHRNB1-206ENST00000574054 AWAT1Q58HT5 328 aa17.7■□□□□ 0.42
CHRNB1-206ENST00000574054 FAM201AQ5SY85 155 aa17.7■□□□□ 0.42
CHRNB1-206ENST00000574054 BTNL3Q6UXE8 466 aa17.7■□□□□ 0.42
CHRNB1-206ENST00000574054 PGAP1Q75T13 922 aa17.7■□□□□ 0.42
CHRNB1-206ENST00000574054 DOK3Q7L591 496 aa17.7■□□□□ 0.42
CHRNB1-206ENST00000574054 BCL6BQ8N143 479 aaPredicted RBP17.7■□□□□ 0.42
CHRNB1-206ENST00000574054 CYB561A3Q8NBI2 242 aa17.7■□□□□ 0.42
CHRNB1-206ENST00000574054 PROKR2Q8NFJ6 384 aa17.7■□□□□ 0.42
CHRNB1-206ENST00000574054 SPRYD4Q8WW59 207 aaPredicted RBP17.7■□□□□ 0.42
CHRNB1-206ENST00000574054 SLCO4A1Q96BD0 722 aa17.7■□□□□ 0.42
CHRNB1-206ENST00000574054 NEIL1Q96FI4 390 aaPredicted RBP17.7■□□□□ 0.42
CHRNB1-206ENST00000574054 PLEKHA8Q96JA3 519 aa17.7■□□□□ 0.42
CHRNB1-206ENST00000574054 TMEM246Q9BRR3 403 aa17.7■□□□□ 0.42
CHRNB1-206ENST00000574054 PNRC2Q9NPJ4 139 aaKnown RBP17.7■□□□□ 0.42
CHRNB1-206ENST00000574054 ARL8BQ9NVJ2 186 aa17.7■□□□□ 0.42
CHRNB1-206ENST00000574054 MRPL22Q9NWU5 206 aaKnown RBP17.7■□□□□ 0.42
CHRNB1-206ENST00000574054 TAGLN3Q9UI15 199 aa17.7■□□□□ 0.42
CHRNB1-206ENST00000574054 IGHV3OR16-10A0A075B7F0 116 aa17.69■□□□□ 0.42
CHRNB1-206ENST00000574054 DNAJC9-AS1A6NH13 148 aa17.69■□□□□ 0.42
CHRNB1-206ENST00000574054 ZNF823P16415 610 aa17.69■□□□□ 0.42
CHRNB1-206ENST00000574054 PMELP40967 661 aa17.69■□□□□ 0.42
CHRNB1-206ENST00000574054 TPTEP56180 551 aa17.69■□□□□ 0.42
CHRNB1-206ENST00000574054 PAX8Q06710 450 aa17.69■□□□□ 0.42
CHRNB1-206ENST00000574054 BAMBIQ13145 260 aa17.69■□□□□ 0.42
CHRNB1-206ENST00000574054 NLRC3Q7RTR2 1065 aa17.69■□□□□ 0.42
CHRNB1-206ENST00000574054 MRPL21Q7Z2W9 205 aaKnown RBP17.69■□□□□ 0.42
CHRNB1-206ENST00000574054 DEFB107AQ8IZN7 70 aa17.69■□□□□ 0.42
CHRNB1-206ENST00000574054 OR8B3Q8NGG8 313 aa17.69■□□□□ 0.42
CHRNB1-206ENST00000574054 OR8B2Q96RD0 313 aa17.69■□□□□ 0.42
CHRNB1-206ENST00000574054 MS4A7Q9GZW8 240 aaPredicted RBP17.69■□□□□ 0.42
CHRNB1-206ENST00000574054 KCNG2Q9UJ96 466 aa17.69■□□□□ 0.42
CHRNB1-206ENST00000574054 CDH10Q9Y6N8 788 aa17.69■□□□□ 0.42
CHRNB1-206ENST00000574054 IGHV2-70DA0A0C4DH43 119 aa17.68■□□□□ 0.42
CHRNB1-206ENST00000574054 TVP23AA6NH52 213 aa17.68■□□□□ 0.42
CHRNB1-206ENST00000574054 M0R135 149 aa17.68■□□□□ 0.42
CHRNB1-206ENST00000574054 CPT2P23786 658 aa17.68■□□□□ 0.42
CHRNB1-206ENST00000574054 RPS27P42677 84 aaKnown RBP17.68■□□□□ 0.42
CHRNB1-206ENST00000574054 PITPNBP48739 271 aa17.68■□□□□ 0.42
CHRNB1-206ENST00000574054 ZNF181Q2M3W8 571 aa17.68■□□□□ 0.42
CHRNB1-206ENST00000574054 ZNF404Q494X3 552 aa17.68■□□□□ 0.42
CHRNB1-206ENST00000574054 C16orf89Q6UX73 402 aa17.68■□□□□ 0.42
CHRNB1-206ENST00000574054 LRRN1Q6UXK5 716 aa17.68■□□□□ 0.42
CHRNB1-206ENST00000574054 OR9Q2Q8NGE9 314 aa17.68■□□□□ 0.42
CHRNB1-206ENST00000574054 OR11L1Q8NGX0 322 aa17.68■□□□□ 0.42
CHRNB1-206ENST00000574054 SPTSSAQ969W0 71 aa17.68■□□□□ 0.42
CHRNB1-206ENST00000574054 ZNF799Q96GE5 643 aa17.68■□□□□ 0.42
CHRNB1-206ENST00000574054 MAP6Q96JE9 813 aa17.68■□□□□ 0.42
CHRNB1-206ENST00000574054 UFSP2Q9NUQ7 469 aa17.68■□□□□ 0.42
CHRNB1-206ENST00000574054 A0A1B0GWJ7 208 aa17.67■□□□□ 0.42
CHRNB1-206ENST00000574054 TNFRSF11BO00300 401 aa17.67■□□□□ 0.42
CHRNB1-206ENST00000574054 SPRY1O43609 319 aaPredicted RBP17.67■□□□□ 0.42
CHRNB1-206ENST00000574054 KRT36O76013 467 aa17.67■□□□□ 0.42
CHRNB1-206ENST00000574054 PRTN3P24158 256 aa17.67■□□□□ 0.42
CHRNB1-206ENST00000574054 MAB21L1Q13394 359 aa17.67■□□□□ 0.42
CHRNB1-206ENST00000574054 OR8G1Q15617 311 aa17.67■□□□□ 0.42
CHRNB1-206ENST00000574054 PRAMEF6Q5VXH4 476 aa17.67■□□□□ 0.42
CHRNB1-206ENST00000574054 RPL13AP3Q6NVV1 102 aa17.67■□□□□ 0.42
CHRNB1-206ENST00000574054 CYP2R1Q6VVX0 501 aa17.67■□□□□ 0.42
CHRNB1-206ENST00000574054 PARP8Q8N3A8 854 aa17.67■□□□□ 0.42
CHRNB1-206ENST00000574054 NDE1Q9NXR1 346 aa17.67■□□□□ 0.42
CHRNB1-206ENST00000574054 LYVE1Q9Y5Y7 322 aa17.67■□□□□ 0.42
CHRNB1-206ENST00000574054 PKD1L1Q8TDX9 2849 aa17.67■□□□□ 0.42
CHRNB1-206ENST00000574054 ATP8B1O43520 1251 aa17.66■□□□□ 0.42
CHRNB1-206ENST00000574054 FAM20BO75063 409 aa17.66■□□□□ 0.42
CHRNB1-206ENST00000574054 IGHV4-38-2P0DP08 117 aa17.66■□□□□ 0.42
CHRNB1-206ENST00000574054 CA6P23280 308 aa17.66■□□□□ 0.42
CHRNB1-206ENST00000574054 GATA4P43694 442 aa17.66■□□□□ 0.42
CHRNB1-206ENST00000574054 RAD23AP54725 363 aa17.66■□□□□ 0.42
CHRNB1-206ENST00000574054 PAX2Q02962 417 aa17.66■□□□□ 0.42
CHRNB1-206ENST00000574054 LYPD4Q6UWN0 246 aa17.66■□□□□ 0.42
CHRNB1-206ENST00000574054 CELF2-AS1Q8N7Q2 184 aa17.66■□□□□ 0.42
CHRNB1-206ENST00000574054 C19orf18Q8NEA5 215 aa17.66■□□□□ 0.42
CHRNB1-206ENST00000574054 OR51L1Q8NGJ5 315 aa17.66■□□□□ 0.42
CHRNB1-206ENST00000574054 OR10S1Q8NGN2 331 aa17.66■□□□□ 0.42
CHRNB1-206ENST00000574054 OR9Q1Q8NGQ5 310 aa17.66■□□□□ 0.42
CHRNB1-206ENST00000574054 OR2T4Q8NH00 348 aa17.66■□□□□ 0.42
CHRNB1-206ENST00000574054 SGMS2Q8NHU3 365 aa17.66■□□□□ 0.42
CHRNB1-206ENST00000574054 RAB40AQ8WXH6 277 aa17.66■□□□□ 0.42
CHRNB1-206ENST00000574054 ZNF48Q96MX3 618 aaPredicted RBP17.66■□□□□ 0.42
CHRNB1-206ENST00000574054 BTBD10Q9BSF8 475 aa17.66■□□□□ 0.42
CHRNB1-206ENST00000574054 ZMAT3Q9HA38 289 aaKnown RBP17.66■□□□□ 0.42
CHRNB1-206ENST00000574054 TBC1D23Q9NUY8 699 aa17.66■□□□□ 0.42
CHRNB1-206ENST00000574054 CLN8Q9UBY8 286 aa17.66■□□□□ 0.42
CHRNB1-206ENST00000574054 ARL2BPQ9Y2Y0 163 aa17.66■□□□□ 0.42
CHRNB1-206ENST00000574054 NOP16Q9Y3C1 178 aaKnown RBP17.66■□□□□ 0.42
CHRNB1-206ENST00000574054 PCDHGB1Q9Y5G3 927 aa17.66■□□□□ 0.42
CHRNB1-206ENST00000574054 GGT3PA6NGU5 568 aa17.65■□□□□ 0.42
CHRNB1-206ENST00000574054 CD300LBA8K4G0 201 aa17.65■□□□□ 0.42
CHRNB1-206ENST00000574054 BHLHE40O14503 412 aa17.65■□□□□ 0.42
CHRNB1-206ENST00000574054 HKR1P10072 659 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms