RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 HAND1O96004 215 aa4.21□□□□□ -1.74
TOPBP1-210ENST00000572787 PCCAP05165 728 aaPredicted RBP4.21□□□□□ -1.74
TOPBP1-210ENST00000572787 HOXC4P09017 264 aaPredicted RBP4.21□□□□□ -1.74
TOPBP1-210ENST00000572787 IGHV4-30-4P0DP06 118 aa4.21□□□□□ -1.74
TOPBP1-210ENST00000572787 ADRB3P13945 408 aa4.21□□□□□ -1.74
TOPBP1-210ENST00000572787 ZNF250P15622 560 aa4.21□□□□□ -1.74
TOPBP1-210ENST00000572787 AKR1C4P17516 323 aa4.21□□□□□ -1.74
TOPBP1-210ENST00000572787 GRPRP30550 384 aa4.21□□□□□ -1.74
TOPBP1-210ENST00000572787 CCKARP32238 428 aa4.21□□□□□ -1.74
TOPBP1-210ENST00000572787 PTGDSP41222 190 aa4.21□□□□□ -1.74
TOPBP1-210ENST00000572787 GP2P55259 537 aaKnown RBP4.21□□□□□ -1.74
TOPBP1-210ENST00000572787 TCL1AP56279 114 aa4.21□□□□□ -1.74
TOPBP1-210ENST00000572787 VSX2P58304 361 aaPredicted RBP4.21□□□□□ -1.74
TOPBP1-210ENST00000572787 RPS13P62277 151 aaKnown RBP4.21□□□□□ -1.74
TOPBP1-210ENST00000572787 MS4A2Q01362 244 aa4.21□□□□□ -1.74
TOPBP1-210ENST00000572787 RPL18AQ02543 176 aaKnown RBP4.21□□□□□ -1.74
TOPBP1-210ENST00000572787 APOFQ13790 326 aa4.21□□□□□ -1.74
TOPBP1-210ENST00000572787 FAM53BQ14153 422 aa4.21□□□□□ -1.74
TOPBP1-210ENST00000572787 EDDM3AQ14507 147 aa4.21□□□□□ -1.74
TOPBP1-210ENST00000572787 WHAMMP3Q1A5X7 153 aa4.21□□□□□ -1.74
TOPBP1-210ENST00000572787 IZUMO4Q1ZYL8 232 aa4.21□□□□□ -1.74
TOPBP1-210ENST00000572787 HLA-DRB5Q30154 266 aa4.21□□□□□ -1.74
TOPBP1-210ENST00000572787 KLHL12Q53G59 568 aa4.21□□□□□ -1.74
TOPBP1-210ENST00000572787 TMEM97Q5BJF2 176 aa4.21□□□□□ -1.74
TOPBP1-210ENST00000572787 VAX1Q5SQQ9 334 aa4.21□□□□□ -1.74
TOPBP1-210ENST00000572787 FAM120AOSQ5T036 256 aa4.21□□□□□ -1.74
TOPBP1-210ENST00000572787 UBE2UQ5VVX9 321 aa4.21□□□□□ -1.74
TOPBP1-210ENST00000572787 SPSB3Q6PJ21 355 aa4.21□□□□□ -1.74
TOPBP1-210ENST00000572787 ZNF793Q6ZN11 406 aa4.21□□□□□ -1.74
TOPBP1-210ENST00000572787 IDO2Q6ZQW0 420 aa4.21□□□□□ -1.74
TOPBP1-210ENST00000572787 FAM220AQ7Z4H9 259 aa4.21□□□□□ -1.74
TOPBP1-210ENST00000572787 TMEM150AQ86TG1 271 aa4.21□□□□□ -1.74
TOPBP1-210ENST00000572787 SLC22A15Q8IZD6 547 aa4.21□□□□□ -1.74
TOPBP1-210ENST00000572787 SPICQ8N5J4 248 aa4.21□□□□□ -1.74
TOPBP1-210ENST00000572787 ATPAF2Q8N5M1 289 aa4.21□□□□□ -1.74
TOPBP1-210ENST00000572787 ACOT4Q8N9L9 421 aa4.21□□□□□ -1.74
TOPBP1-210ENST00000572787 OR4K17Q8NGC6 315 aa4.21□□□□□ -1.74
TOPBP1-210ENST00000572787 OR56B4Q8NH76 319 aa4.21□□□□□ -1.74
TOPBP1-210ENST00000572787 EEF1AKMT1Q8WVE0 214 aa4.21□□□□□ -1.74
TOPBP1-210ENST00000572787 TMEM234Q8WY98 164 aa4.21□□□□□ -1.74
TOPBP1-210ENST00000572787 RASL10AQ92737 203 aa4.21□□□□□ -1.74
TOPBP1-210ENST00000572787 FGGYQ96C11 551 aa4.21□□□□□ -1.74
TOPBP1-210ENST00000572787 DNAJC19Q96DA6 116 aa4.21□□□□□ -1.74
TOPBP1-210ENST00000572787 BTF3L4Q96K17 158 aa4.21□□□□□ -1.74
TOPBP1-210ENST00000572787 C17orf77Q96MU5 243 aa4.21□□□□□ -1.74
TOPBP1-210ENST00000572787 NKX3-1Q99801 234 aaPredicted RBP4.21□□□□□ -1.74
TOPBP1-210ENST00000572787 HOXD1Q9GZZ0 328 aa4.21□□□□□ -1.74
TOPBP1-210ENST00000572787 TXNIPQ9H3M7 391 aa4.21□□□□□ -1.74
TOPBP1-210ENST00000572787 WDR41Q9HAD4 459 aa4.21□□□□□ -1.74
TOPBP1-210ENST00000572787 AMBNQ9NP70 447 aa4.21□□□□□ -1.74
TOPBP1-210ENST00000572787 EXOSC4Q9NPD3 245 aaKnown RBP4.21□□□□□ -1.74
TOPBP1-210ENST00000572787 EHFQ9NZC4 300 aa4.21□□□□□ -1.74
TOPBP1-210ENST00000572787 NUDT4Q9NZJ9 180 aa4.21□□□□□ -1.74
TOPBP1-210ENST00000572787 COMMD9Q9P000 198 aa4.21□□□□□ -1.74
TOPBP1-210ENST00000572787 ZNF225Q9UK10 706 aa4.21□□□□□ -1.74
TOPBP1-210ENST00000572787 L3MBTL1Q9Y468 752 aa4.21□□□□□ -1.74
TOPBP1-210ENST00000572787 KLF12Q9Y4X4 402 aa4.21□□□□□ -1.74
TOPBP1-210ENST00000572787 ALG5Q9Y673 324 aa4.21□□□□□ -1.74
TOPBP1-210ENST00000572787 ARHGEF10O15013 1369 aa4.21□□□□□ -1.74
TOPBP1-210ENST00000572787 ZMYM2Q9UBW7 1377 aa4.21□□□□□ -1.74
TOPBP1-210ENST00000572787 CENPVL1A0A0U1RR11 272 aa4.2□□□□□ -1.74
TOPBP1-210ENST00000572787 CENPVL3A0A0U1RRI6 287 aa4.2□□□□□ -1.74
TOPBP1-210ENST00000572787 A0A1W2PPI3 338 aa4.2□□□□□ -1.74
TOPBP1-210ENST00000572787 DAPL1A0PJW8 107 aa4.2□□□□□ -1.74
TOPBP1-210ENST00000572787 A6NDN8 102 aa4.2□□□□□ -1.74
TOPBP1-210ENST00000572787 RFPL4AA6NLU0 287 aa4.2□□□□□ -1.74
TOPBP1-210ENST00000572787 PPP5D1E7EU14 171 aa4.2□□□□□ -1.74
TOPBP1-210ENST00000572787 F5H5K5 113 aa4.2□□□□□ -1.74
TOPBP1-210ENST00000572787 RFPL4AL1F8VTS6 287 aa4.2□□□□□ -1.74
TOPBP1-210ENST00000572787 C15orf65H3BRN8 121 aa4.2□□□□□ -1.74
TOPBP1-210ENST00000572787 NME4O00746 187 aa4.2□□□□□ -1.74
TOPBP1-210ENST00000572787 BHLHE40O14503 412 aa4.2□□□□□ -1.74
TOPBP1-210ENST00000572787 PHYHO14832 338 aa4.2□□□□□ -1.74
TOPBP1-210ENST00000572787 FOXS1O43638 330 aa4.2□□□□□ -1.74
TOPBP1-210ENST00000572787 CHP2O43745 196 aa4.2□□□□□ -1.74
TOPBP1-210ENST00000572787 TYROBPO43914 113 aa4.2□□□□□ -1.74
TOPBP1-210ENST00000572787 PLIN3O60664 434 aa4.2□□□□□ -1.74
TOPBP1-210ENST00000572787 CTSLP07711 333 aa4.2□□□□□ -1.74
TOPBP1-210ENST00000572787 SDC1P18827 310 aa4.2□□□□□ -1.74
TOPBP1-210ENST00000572787 MYL12AP19105 171 aa4.2□□□□□ -1.74
TOPBP1-210ENST00000572787 IGFBP5P24593 272 aa4.2□□□□□ -1.74
TOPBP1-210ENST00000572787 RPL12P30050 165 aaKnown RBP4.2□□□□□ -1.74
TOPBP1-210ENST00000572787 RORCP51449 518 aa4.2□□□□□ -1.74
TOPBP1-210ENST00000572787 DVL1P1P54792 670 aaPredicted RBP4.2□□□□□ -1.74
TOPBP1-210ENST00000572787 DLX1P56177 255 aa4.2□□□□□ -1.74
TOPBP1-210ENST00000572787 OR12D2P58182 307 aa4.2□□□□□ -1.74
TOPBP1-210ENST00000572787 ARG2P78540 354 aa4.2□□□□□ -1.74
TOPBP1-210ENST00000572787 ZNF154Q13106 437 aa4.2□□□□□ -1.74
TOPBP1-210ENST00000572787 GPR18Q14330 331 aa4.2□□□□□ -1.74
TOPBP1-210ENST00000572787 ZNF235Q14590 738 aa4.2□□□□□ -1.74
TOPBP1-210ENST00000572787 KIR2DS3Q14952 304 aa4.2□□□□□ -1.74
TOPBP1-210ENST00000572787 CYP51A1Q16850 503 aa4.2□□□□□ -1.74
TOPBP1-210ENST00000572787 LRRC36Q1X8D7 754 aa4.2□□□□□ -1.74
TOPBP1-210ENST00000572787 CLEC12BQ2HXU8 276 aa4.2□□□□□ -1.74
TOPBP1-210ENST00000572787 LIN52Q52LA3 116 aa4.2□□□□□ -1.74
TOPBP1-210ENST00000572787 HIST2H3PS2Q5TEC6 136 aa4.2□□□□□ -1.74
TOPBP1-210ENST00000572787 ZNF774Q6NX45 483 aa4.2□□□□□ -1.74
TOPBP1-210ENST00000572787 C8orf82Q6P1X6 216 aaPredicted RBP4.2□□□□□ -1.74
TOPBP1-210ENST00000572787 ADAMTSL5Q6ZMM2 481 aa4.2□□□□□ -1.74
TOPBP1-210ENST00000572787 PRSS41Q7RTY9 318 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms