RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 DUX4L3P0CJ86 424 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 DUX4L4P0CJ87 422 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 DUX4L5P0CJ88 424 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 DUX4L6P0CJ89 424 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 DUX4L7P0CJ90 424 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 NPIPA8P0DM63 369 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 LBPP18428 481 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 TCN1P20061 433 aaPredicted RBP4.5□□□□□ -1.69
SF3B3-214ENST00000572365 OMGP23515 440 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 SOAT1P35610 550 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 EIF3EP60228 445 aaKnown RBP4.5□□□□□ -1.69
SF3B3-214ENST00000572365 HERVK_113P63132 956 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 ERVK-8P63133 956 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 RPP38P78345 283 aaKnown RBP4.5□□□□□ -1.69
SF3B3-214ENST00000572365 FLI1Q01543 452 aaPredicted RBP4.5□□□□□ -1.69
SF3B3-214ENST00000572365 RASGEF1BQ0VAM2 473 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 STX5Q13190 355 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 TFDP2Q14188 446 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 ARHGAP19Q14CB8 494 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 STK11Q15831 433 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 Q3ZCU0 254 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 ARMCX4Q5H9R4 360 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 GPR107Q5VW38 600 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 OR4A47Q6IF82 309 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 SULT1C3Q6IMI6 304 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 ADNP2Q6IQ32 1131 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 AGTRAPQ6RW13 159 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 CYHR1Q6ZMK1 362 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 ISCA2Q86U28 154 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 CDH26Q8IXH8 852 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 CDK20Q8IZL9 346 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 SLC38A6Q8IZM9 456 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 DEFB107AQ8IZN7 70 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 LINC00518Q8N0U6 118 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 PDIK1LQ8N165 341 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 DHRSXQ8N5I4 330 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 ZNF383Q8NA42 475 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 FNDC5Q8NAU1 212 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 RHOXF1Q8NHV9 184 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 ACTL9Q8TC94 416 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 SPPL2AQ8TCT8 520 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 TCP10LQ8TDR4 215 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 DNAJA4Q8WW22 397 aaPredicted RBP4.5□□□□□ -1.69
SF3B3-214ENST00000572365 FCAMRQ8WWV6 532 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 RIT1Q92963 219 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 TUBGCP3Q96CW5 907 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 ASB9Q96DX5 294 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 TMEM80Q96HE8 168 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 ZFP3Q96NJ6 502 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 OR4K3Q96R72 315 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 NODALQ96S42 347 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 VAT1Q99536 393 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 MAPKAP1Q9BPZ7 522 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 TMEM246Q9BRR3 403 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 CCDC32Q9BV29 185 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 ERVK-6Q9BXR3 956 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 MMP28Q9H239 520 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 ARMC7Q9H6L4 198 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 NARFLQ9H6Q4 476 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 NIPAL2Q9H841 368 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 PDP1Q9P0J1 537 aaPredicted RBP4.5□□□□□ -1.69
SF3B3-214ENST00000572365 COPS7AQ9UBW8 275 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 DUX4Q9UBX2 424 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 RIMS3Q9UJD0 308 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 ERVK-19Q9WJR5 959 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 RBMX2Q9Y388 322 aaKnown RBP4.5□□□□□ -1.69
SF3B3-214ENST00000572365 MMACHCQ9Y4U1 282 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 PLXNB1O43157 2135 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 NOTCH3Q9UM47 2321 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 hCG_1818297A0A087WSY0 165 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 B4DXG7 233 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 C9JVG2 144 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 E5RI56 91 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 LYNX1G3V0Z9 82 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 WRBO00258 174 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 ABCD4O14678 606 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 EMC8O43402 210 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 PSTPIP1O43586 416 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 FMO6PO60774 539 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 CTNSO60931 367 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 ICOSLGO75144 302 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 UGT2B11O75310 529 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 SUPT7LO94864 414 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 GUCA1CO95843 209 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 PLGP00747 810 aaPredicted RBP4.49□□□□□ -1.69
SF3B3-214ENST00000572365 TFPTP0C1Z6 253 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 LYNX1P0DP58 116 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 UMPSP11172 480 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 COX4I1P13073 169 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 IL7P13232 177 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 ETS1P14921 441 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 ZNF26P17031 533 aaPredicted RBP4.49□□□□□ -1.69
SF3B3-214ENST00000572365 EPORP19235 508 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 PIK3R1P27986 724 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 EVI2BP34910 448 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 SERPINB5P36952 375 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 HSD17B2P37059 387 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 SLC6A12P48065 614 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 GDI2P50395 445 aaKnown RBP4.49□□□□□ -1.69
SF3B3-214ENST00000572365 FABP6P51161 128 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms