RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 RFLNBQ8N5W9 214 aa20.25■□□□□ 0.83
RAB40C-212ENST00000569575 CCDC54Q8NEL0 328 aa20.25■□□□□ 0.83
RAB40C-212ENST00000569575 OR10A2Q9H208 303 aa20.25■□□□□ 0.83
RAB40C-212ENST00000569575 ZNF696Q9H7X3 374 aa20.25■□□□□ 0.83
RAB40C-212ENST00000569575 TRIM36Q9NQ86 728 aa20.25■□□□□ 0.83
RAB40C-212ENST00000569575 NUFIP1Q9UHK0 495 aaKnown RBP20.25■□□□□ 0.83
RAB40C-212ENST00000569575 POU2F3Q9UKI9 436 aa20.25■□□□□ 0.83
RAB40C-212ENST00000569575 A0A0U1RQV5 110 aa20.24■□□□□ 0.83
RAB40C-212ENST00000569575 PRR32B1ATL7 298 aa20.24■□□□□ 0.83
RAB40C-212ENST00000569575 SHISA9B4DS77 424 aa20.24■□□□□ 0.83
RAB40C-212ENST00000569575 ATP6V1G2-DDX39BF2Z307 99 aa20.24■□□□□ 0.83
RAB40C-212ENST00000569575 LOC110117498-PIK3R3F6TDL0 507 aa20.24■□□□□ 0.83
RAB40C-212ENST00000569575 SRSF10O75494 262 aaKnown RBP20.24■□□□□ 0.83
RAB40C-212ENST00000569575 CTAG2O75638 210 aa20.24■□□□□ 0.83
RAB40C-212ENST00000569575 WNT5AP41221 380 aa20.24■□□□□ 0.83
RAB40C-212ENST00000569575 ZNF121P58317 390 aaPredicted RBP20.24■□□□□ 0.83
RAB40C-212ENST00000569575 TLE4Q04727 773 aa20.24■□□□□ 0.83
RAB40C-212ENST00000569575 HGFACQ04756 655 aa20.24■□□□□ 0.83
RAB40C-212ENST00000569575 TBCEQ15813 527 aaPredicted RBP20.24■□□□□ 0.83
RAB40C-212ENST00000569575 MOGQ16653 247 aa20.24■□□□□ 0.83
RAB40C-212ENST00000569575 TP53I3Q53FA7 332 aa20.24■□□□□ 0.83
RAB40C-212ENST00000569575 SLC7A6Q92536 515 aa20.24■□□□□ 0.83
RAB40C-212ENST00000569575 FCGR1BQ92637 280 aa20.24■□□□□ 0.83
RAB40C-212ENST00000569575 PELI1Q96FA3 418 aa20.24■□□□□ 0.83
RAB40C-212ENST00000569575 CCDC90BQ9GZT6 254 aa20.24■□□□□ 0.83
RAB40C-212ENST00000569575 ISYNA1Q9NPH2 558 aa20.24■□□□□ 0.83
RAB40C-212ENST00000569575 FAM206AQ9NX38 181 aa20.24■□□□□ 0.83
RAB40C-212ENST00000569575 PSMD9O00233 223 aa20.23■□□□□ 0.83
RAB40C-212ENST00000569575 ANXA2P07355 339 aaKnown RBP20.23■□□□□ 0.83
RAB40C-212ENST00000569575 HTR1AP08908 422 aa20.23■□□□□ 0.83
RAB40C-212ENST00000569575 EVX1P49640 407 aa20.23■□□□□ 0.83
RAB40C-212ENST00000569575 SELENOVP59797 346 aa20.23■□□□□ 0.83
RAB40C-212ENST00000569575 PPP1CBP62140 327 aa20.23■□□□□ 0.83
RAB40C-212ENST00000569575 SNTB2Q13425 540 aaKnown RBP20.23■□□□□ 0.83
RAB40C-212ENST00000569575 ZNF718Q3SXZ3 478 aa20.23■□□□□ 0.83
RAB40C-212ENST00000569575 RPL22L1Q6P5R6 122 aaKnown RBP20.23■□□□□ 0.83
RAB40C-212ENST00000569575 ZNF773Q6PK81 442 aa20.23■□□□□ 0.83
RAB40C-212ENST00000569575 ZNF704Q6ZNC4 412 aaPredicted RBP20.23■□□□□ 0.83
RAB40C-212ENST00000569575 PAQR4Q8N4S7 273 aaPredicted RBP20.23■□□□□ 0.83
RAB40C-212ENST00000569575 ZNF485Q8NCK3 441 aa20.23■□□□□ 0.83
RAB40C-212ENST00000569575 ABHD4Q8TB40 342 aa20.23■□□□□ 0.83
RAB40C-212ENST00000569575 RORBQ92753 470 aa20.23■□□□□ 0.83
RAB40C-212ENST00000569575 FAIMQ9NVQ4 179 aa20.23■□□□□ 0.83
RAB40C-212ENST00000569575 ATP23Q9Y6H3 246 aa20.23■□□□□ 0.83
RAB40C-212ENST00000569575 TENM4Q6N022 2769 aa20.22■□□□□ 0.83
RAB40C-212ENST00000569575 A0A087WXM4 84 aa20.22■□□□□ 0.83
RAB40C-212ENST00000569575 ATP6V1B1P15313 513 aa20.22■□□□□ 0.83
RAB40C-212ENST00000569575 APOBEC3AP31941 199 aaPredicted RBP20.22■□□□□ 0.83
RAB40C-212ENST00000569575 SPHARQ15513 63 aa20.22■□□□□ 0.83
RAB40C-212ENST00000569575 ZNF672Q499Z4 452 aaPredicted RBP20.22■□□□□ 0.83
RAB40C-212ENST00000569575 MBNL2Q5VZF2 373 aaKnown RBP20.22■□□□□ 0.83
RAB40C-212ENST00000569575 RGS7BPQ6MZT1 257 aaPredicted RBP20.22■□□□□ 0.83
RAB40C-212ENST00000569575 FBXW12Q6X9E4 464 aa20.22■□□□□ 0.83
RAB40C-212ENST00000569575 ELMOD2Q8IZ81 293 aa20.22■□□□□ 0.83
RAB40C-212ENST00000569575 ZNF101Q8IZC7 436 aa20.22■□□□□ 0.83
RAB40C-212ENST00000569575 OR1J1Q8NGS3 322 aa20.22■□□□□ 0.83
RAB40C-212ENST00000569575 SPRYD4Q8WW59 207 aaPredicted RBP20.22■□□□□ 0.83
RAB40C-212ENST00000569575 AKAP1Q92667 903 aaKnown RBP eCLIP20.22■□□□□ 0.83
RAB40C-212ENST00000569575 SPSB4Q96A44 273 aa20.22■□□□□ 0.83
RAB40C-212ENST00000569575 PGAM5Q96HS1 289 aa20.22■□□□□ 0.83
RAB40C-212ENST00000569575 DHRS9Q9BPW9 319 aa20.22■□□□□ 0.83
RAB40C-212ENST00000569575 CA10Q9NS85 328 aa20.22■□□□□ 0.83
RAB40C-212ENST00000569575 ACOXLQ9NUZ1 547 aa20.22■□□□□ 0.83
RAB40C-212ENST00000569575 CLEC2DQ9UHP7 191 aa20.22■□□□□ 0.83
RAB40C-212ENST00000569575 CMAHPQ9Y471 501 aa20.22■□□□□ 0.83
RAB40C-212ENST00000569575 GCN1Q92616 2671 aaKnown RBP20.21■□□□□ 0.83
RAB40C-212ENST00000569575 ATE1O95260 518 aa20.21■□□□□ 0.83
RAB40C-212ENST00000569575 MT-ND2P03891 347 aa20.21■□□□□ 0.83
RAB40C-212ENST00000569575 CD1AP06126 327 aa20.21■□□□□ 0.83
RAB40C-212ENST00000569575 LCKP06239 509 aa20.21■□□□□ 0.83
RAB40C-212ENST00000569575 RAC2P15153 192 aa20.21■□□□□ 0.83
RAB40C-212ENST00000569575 SELEP16581 610 aa20.21■□□□□ 0.83
RAB40C-212ENST00000569575 GPR50Q13585 617 aa20.21■□□□□ 0.83
RAB40C-212ENST00000569575 BCL2L15Q5TBC7 163 aa20.21■□□□□ 0.83
RAB40C-212ENST00000569575 CATSPERDQ86XM0 798 aa20.21■□□□□ 0.83
RAB40C-212ENST00000569575 OR2G2Q8NGZ5 317 aa20.21■□□□□ 0.83
RAB40C-212ENST00000569575 TTTY10Q9BZA0 68 aa20.21■□□□□ 0.83
RAB40C-212ENST00000569575 PBOV1Q9GZY1 135 aa20.21■□□□□ 0.83
RAB40C-212ENST00000569575 ISG20L2Q9H9L3 353 aaKnown RBP20.21■□□□□ 0.83
RAB40C-212ENST00000569575 CISD1Q9NZ45 108 aaKnown RBP20.21■□□□□ 0.83
RAB40C-212ENST00000569575 OR52A1Q9UKL2 312 aa20.21■□□□□ 0.83
RAB40C-212ENST00000569575 ABCA4P78363 2273 aa20.21■□□□□ 0.83
RAB40C-212ENST00000569575 ADGRG4Q8IZF6 3080 aa20.2■□□□□ 0.82
RAB40C-212ENST00000569575 RPP14O95059 124 aaKnown RBP20.2■□□□□ 0.82
RAB40C-212ENST00000569575 ADRA2AP08913 450 aa20.2■□□□□ 0.82
RAB40C-212ENST00000569575 FAM157BP0CG42 384 aa20.2■□□□□ 0.82
RAB40C-212ENST00000569575 UBCP0CG48 685 aaKnown RBP20.2■□□□□ 0.82
RAB40C-212ENST00000569575 ZNF250P15622 560 aa20.2■□□□□ 0.82
RAB40C-212ENST00000569575 ZNF12P17014 697 aa20.2■□□□□ 0.82
RAB40C-212ENST00000569575 GCH1P30793 250 aa20.2■□□□□ 0.82
RAB40C-212ENST00000569575 DDOSTP39656 456 aa20.2■□□□□ 0.82
RAB40C-212ENST00000569575 ALKBH1Q13686 389 aaKnown RBP20.2■□□□□ 0.82
RAB40C-212ENST00000569575 OR2G6Q5TZ20 316 aa20.2■□□□□ 0.82
RAB40C-212ENST00000569575 FAM57BQ71RH2 274 aa20.2■□□□□ 0.82
RAB40C-212ENST00000569575 SPARTQ8N0X7 666 aa20.2■□□□□ 0.82
RAB40C-212ENST00000569575 TMEM171Q8WVE6 324 aa20.2■□□□□ 0.82
RAB40C-212ENST00000569575 MARS2Q96GW9 593 aaKnown RBP20.2■□□□□ 0.82
RAB40C-212ENST00000569575 VCX3AQ9NNX9 186 aa20.2■□□□□ 0.82
RAB40C-212ENST00000569575 G6PC2Q9NQR9 355 aa20.2■□□□□ 0.82
RAB40C-212ENST00000569575 CGGBP1Q9UFW8 167 aaPredicted RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms