RNA–Protein interactions for RNA: ENST00000567638.1

SCAMP2-209, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 678 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-209ENST00000567638 LRRC30A6NM36 301 aa12.61□□□□□ -0.39
SCAMP2-209ENST00000567638 ZNF205O95201 554 aa12.61□□□□□ -0.39
SCAMP2-209ENST00000567638 FSTL3O95633 263 aa12.61□□□□□ -0.39
SCAMP2-209ENST00000567638 LCATP04180 440 aa12.61□□□□□ -0.39
SCAMP2-209ENST00000567638 HLA-DPB1P04440 258 aa12.61□□□□□ -0.39
SCAMP2-209ENST00000567638 GATA4P43694 442 aa12.61□□□□□ -0.39
SCAMP2-209ENST00000567638 MALLQ13021 153 aa12.61□□□□□ -0.39
SCAMP2-209ENST00000567638 ZNF404Q494X3 552 aa12.61□□□□□ -0.39
SCAMP2-209ENST00000567638 SPATS1Q496A3 300 aa12.61□□□□□ -0.39
SCAMP2-209ENST00000567638 CLEC12AQ5QGZ9 265 aa12.61□□□□□ -0.39
SCAMP2-209ENST00000567638 RPL13AP3Q6NVV1 102 aa12.61□□□□□ -0.39
SCAMP2-209ENST00000567638 C16orf89Q6UX73 402 aa12.61□□□□□ -0.39
SCAMP2-209ENST00000567638 RBMS3Q6XE24 437 aaKnown RBP12.61□□□□□ -0.39
SCAMP2-209ENST00000567638 DOK3Q7L591 496 aa12.61□□□□□ -0.39
SCAMP2-209ENST00000567638 NAA40Q86UY6 237 aa12.61□□□□□ -0.39
SCAMP2-209ENST00000567638 KLBQ86Z14 1044 aa12.61□□□□□ -0.39
SCAMP2-209ENST00000567638 DEFB107AQ8IZN7 70 aa12.61□□□□□ -0.39
SCAMP2-209ENST00000567638 C1orf87Q8N0U7 546 aa12.61□□□□□ -0.39
SCAMP2-209ENST00000567638 SIGLECL1Q8N7X8 197 aa12.61□□□□□ -0.39
SCAMP2-209ENST00000567638 OR52L1Q8NGH7 329 aa12.61□□□□□ -0.39
SCAMP2-209ENST00000567638 ZMYND19Q96E35 227 aaPredicted RBP12.61□□□□□ -0.39
SCAMP2-209ENST00000567638 MAP6Q96JE9 813 aa12.61□□□□□ -0.39
SCAMP2-209ENST00000567638 TMEM246Q9BRR3 403 aa12.61□□□□□ -0.39
SCAMP2-209ENST00000567638 DDX28Q9NUL7 540 aaKnown RBP12.61□□□□□ -0.39
SCAMP2-209ENST00000567638 NDE1Q9NXR1 346 aa12.61□□□□□ -0.39
SCAMP2-209ENST00000567638 MIOXQ9UGB7 285 aa12.61□□□□□ -0.39
SCAMP2-209ENST00000567638 LYVE1Q9Y5Y7 322 aa12.61□□□□□ -0.39
SCAMP2-209ENST00000567638 M0R135 149 aa12.6□□□□□ -0.39
SCAMP2-209ENST00000567638 BHLHE40O14503 412 aa12.6□□□□□ -0.39
SCAMP2-209ENST00000567638 KRT36O76013 467 aa12.6□□□□□ -0.39
SCAMP2-209ENST00000567638 ZNF823P16415 610 aa12.6□□□□□ -0.39
SCAMP2-209ENST00000567638 PYCR1P32322 319 aa12.6□□□□□ -0.39
SCAMP2-209ENST00000567638 CD80P33681 288 aa12.6□□□□□ -0.39
SCAMP2-209ENST00000567638 PMELP40967 661 aa12.6□□□□□ -0.39
SCAMP2-209ENST00000567638 HMGA2P52926 109 aa12.6□□□□□ -0.39
SCAMP2-209ENST00000567638 TPTEP56180 551 aa12.6□□□□□ -0.39
SCAMP2-209ENST00000567638 GNB2P62879 340 aa12.6□□□□□ -0.39
SCAMP2-209ENST00000567638 MXRA7P84157 204 aa12.6□□□□□ -0.39
SCAMP2-209ENST00000567638 PAX2Q02962 417 aa12.6□□□□□ -0.39
SCAMP2-209ENST00000567638 PAX8Q06710 450 aa12.6□□□□□ -0.39
SCAMP2-209ENST00000567638 PGAP1Q75T13 922 aa12.6□□□□□ -0.39
SCAMP2-209ENST00000567638 LINC00471Q8N535 108 aa12.6□□□□□ -0.39
SCAMP2-209ENST00000567638 CELF2-AS1Q8N7Q2 184 aa12.6□□□□□ -0.39
SCAMP2-209ENST00000567638 OR9Q2Q8NGE9 314 aa12.6□□□□□ -0.39
SCAMP2-209ENST00000567638 OR10S1Q8NGN2 331 aa12.6□□□□□ -0.39
SCAMP2-209ENST00000567638 SLCO4A1Q96BD0 722 aa12.6□□□□□ -0.39
SCAMP2-209ENST00000567638 NEIL1Q96FI4 390 aaPredicted RBP12.6□□□□□ -0.39
SCAMP2-209ENST00000567638 ZNF799Q96GE5 643 aa12.6□□□□□ -0.39
SCAMP2-209ENST00000567638 BTBD10Q9BSF8 475 aa12.6□□□□□ -0.39
SCAMP2-209ENST00000567638 ARL2BPQ9Y2Y0 163 aa12.6□□□□□ -0.39
SCAMP2-209ENST00000567638 IGHV2-70DA0A0C4DH43 119 aa12.59□□□□□ -0.39
SCAMP2-209ENST00000567638 DNAJC9-AS1A6NH13 148 aa12.59□□□□□ -0.39
SCAMP2-209ENST00000567638 DCTN3O75935 186 aa12.59□□□□□ -0.39
SCAMP2-209ENST00000567638 ATP6V1B2P21281 511 aa12.59□□□□□ -0.39
SCAMP2-209ENST00000567638 CD200P41217 278 aa12.59□□□□□ -0.39
SCAMP2-209ENST00000567638 RPS27P42677 84 aaKnown RBP12.59□□□□□ -0.39
SCAMP2-209ENST00000567638 RAD23AP54725 363 aa12.59□□□□□ -0.39
SCAMP2-209ENST00000567638 MAB21L1Q13394 359 aa12.59□□□□□ -0.39
SCAMP2-209ENST00000567638 AWAT1Q58HT5 328 aa12.59□□□□□ -0.39
SCAMP2-209ENST00000567638 FAM201AQ5SY85 155 aa12.59□□□□□ -0.39
SCAMP2-209ENST00000567638 ZNF770Q6IQ21 691 aaPredicted RBP12.59□□□□□ -0.39
SCAMP2-209ENST00000567638 BTNL3Q6UXE8 466 aa12.59□□□□□ -0.39
SCAMP2-209ENST00000567638 LRRN1Q6UXK5 716 aa12.59□□□□□ -0.39
SCAMP2-209ENST00000567638 CYP2R1Q6VVX0 501 aa12.59□□□□□ -0.39
SCAMP2-209ENST00000567638 MRPL21Q7Z2W9 205 aaKnown RBP12.59□□□□□ -0.39
SCAMP2-209ENST00000567638 BCL6BQ8N143 479 aaPredicted RBP12.59□□□□□ -0.39
SCAMP2-209ENST00000567638 CYB561A3Q8NBI2 242 aa12.59□□□□□ -0.39
SCAMP2-209ENST00000567638 PROKR2Q8NFJ6 384 aa12.59□□□□□ -0.39
SCAMP2-209ENST00000567638 OR8B3Q8NGG8 313 aa12.59□□□□□ -0.39
SCAMP2-209ENST00000567638 OR8D4Q8NGM9 314 aa12.59□□□□□ -0.39
SCAMP2-209ENST00000567638 OR2T4Q8NH00 348 aa12.59□□□□□ -0.39
SCAMP2-209ENST00000567638 Q8TCH9 128 aa12.59□□□□□ -0.39
SCAMP2-209ENST00000567638 SPTSSAQ969W0 71 aa12.59□□□□□ -0.39
SCAMP2-209ENST00000567638 ERGIC1Q969X5 290 aa12.59□□□□□ -0.39
SCAMP2-209ENST00000567638 DACT3Q96B18 629 aaPredicted RBP12.59□□□□□ -0.39
SCAMP2-209ENST00000567638 PLEKHA8Q96JA3 519 aa12.59□□□□□ -0.39
SCAMP2-209ENST00000567638 OR8B2Q96RD0 313 aa12.59□□□□□ -0.39
SCAMP2-209ENST00000567638 DDOQ99489 341 aa12.59□□□□□ -0.39
SCAMP2-209ENST00000567638 TRIM15Q9C019 465 aa12.59□□□□□ -0.39
SCAMP2-209ENST00000567638 ZMAT3Q9HA38 289 aaKnown RBP12.59□□□□□ -0.39
SCAMP2-209ENST00000567638 IL20Q9NYY1 176 aa12.59□□□□□ -0.39
SCAMP2-209ENST00000567638 TVP23AA6NH52 213 aa12.58□□□□□ -0.4
SCAMP2-209ENST00000567638 TNFRSF11BO00300 401 aa12.58□□□□□ -0.4
SCAMP2-209ENST00000567638 PPIAL4GP0DN37 164 aa12.58□□□□□ -0.4
SCAMP2-209ENST00000567638 PSKH1P11801 424 aa12.58□□□□□ -0.4
SCAMP2-209ENST00000567638 IRF2P14316 349 aa12.58□□□□□ -0.4
SCAMP2-209ENST00000567638 PRTN3P24158 256 aa12.58□□□□□ -0.4
SCAMP2-209ENST00000567638 OTX1P32242 354 aaPredicted RBP12.58□□□□□ -0.4
SCAMP2-209ENST00000567638 MAGEA2P43356 314 aa12.58□□□□□ -0.4
SCAMP2-209ENST00000567638 PITPNBP48739 271 aa12.58□□□□□ -0.4
SCAMP2-209ENST00000567638 GNGT1P63211 74 aa12.58□□□□□ -0.4
SCAMP2-209ENST00000567638 SNAI3Q3KNW1 292 aa12.58□□□□□ -0.4
SCAMP2-209ENST00000567638 ZNF362Q5T0B9 420 aaPredicted RBP12.58□□□□□ -0.4
SCAMP2-209ENST00000567638 PRAMEF6Q5VXH4 476 aa12.58□□□□□ -0.4
SCAMP2-209ENST00000567638 LYPD4Q6UWN0 246 aa12.58□□□□□ -0.4
SCAMP2-209ENST00000567638 RASSF6Q6ZTQ3 369 aa12.58□□□□□ -0.4
SCAMP2-209ENST00000567638 NLRC3Q7RTR2 1065 aa12.58□□□□□ -0.4
SCAMP2-209ENST00000567638 PIGWQ7Z7B1 504 aa12.58□□□□□ -0.4
SCAMP2-209ENST00000567638 PARP8Q8N3A8 854 aa12.58□□□□□ -0.4
SCAMP2-209ENST00000567638 SLC37A3Q8NCC5 494 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms