RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 CD300CQ08708 224 aa2.63□□□□□ -1.99
HERPUD1-211ENST00000566550 ST3GAL4Q11206 333 aa2.63□□□□□ -1.99
HERPUD1-211ENST00000566550 ILF3Q12906 894 aaKnown RBP eCLIP2.63□□□□□ -1.99
HERPUD1-211ENST00000566550 GUSBP1Q15486 140 aa2.63□□□□□ -1.99
HERPUD1-211ENST00000566550 ATP6AP1Q15904 470 aa2.63□□□□□ -1.99
HERPUD1-211ENST00000566550 POU2AF1Q16633 256 aa2.63□□□□□ -1.99
HERPUD1-211ENST00000566550 NRF1Q16656 503 aa2.63□□□□□ -1.99
HERPUD1-211ENST00000566550 RGS21Q2M5E4 152 aa2.63□□□□□ -1.99
HERPUD1-211ENST00000566550 ZNF718Q3SXZ3 478 aa2.63□□□□□ -1.99
HERPUD1-211ENST00000566550 ZNF876PQ49A33 203 aa2.63□□□□□ -1.99
HERPUD1-211ENST00000566550 ZNF585BQ52M93 769 aa2.63□□□□□ -1.99
HERPUD1-211ENST00000566550 OR10J3Q5JRS4 329 aa2.63□□□□□ -1.99
HERPUD1-211ENST00000566550 KLF17Q5JT82 389 aaPredicted RBP2.63□□□□□ -1.99
HERPUD1-211ENST00000566550 RBM48Q5RL73 367 aaKnown RBP2.63□□□□□ -1.99
HERPUD1-211ENST00000566550 UBE2UQ5VVX9 321 aa2.63□□□□□ -1.99
HERPUD1-211ENST00000566550 OR2T5Q6IEZ7 315 aa2.63□□□□□ -1.99
HERPUD1-211ENST00000566550 WDR82Q6UXN9 313 aa2.63□□□□□ -1.99
HERPUD1-211ENST00000566550 OAFQ86UD1 273 aa2.63□□□□□ -1.99
HERPUD1-211ENST00000566550 NAXDQ8IW45 347 aa2.63□□□□□ -1.99
HERPUD1-211ENST00000566550 FAM71AQ8IYT1 594 aa2.63□□□□□ -1.99
HERPUD1-211ENST00000566550 C6orf223Q8N319 242 aa2.63□□□□□ -1.99
HERPUD1-211ENST00000566550 CBR4Q8N4T8 237 aa2.63□□□□□ -1.99
HERPUD1-211ENST00000566550 Q8NBF4 154 aa2.63□□□□□ -1.99
HERPUD1-211ENST00000566550 CCDC112Q8NEF3 446 aa2.63□□□□□ -1.99
HERPUD1-211ENST00000566550 OR8G5Q8NG78 346 aa2.63□□□□□ -1.99
HERPUD1-211ENST00000566550 OR4K2Q8NGD2 314 aa2.63□□□□□ -1.99
HERPUD1-211ENST00000566550 OR52E2Q8NGJ4 325 aa2.63□□□□□ -1.99
HERPUD1-211ENST00000566550 OR6T1Q8NGN1 323 aa2.63□□□□□ -1.99
HERPUD1-211ENST00000566550 OR2T29Q8NH02 315 aa2.63□□□□□ -1.99
HERPUD1-211ENST00000566550 OR2L2Q8NH16 312 aa2.63□□□□□ -1.99
HERPUD1-211ENST00000566550 FRAT1Q92837 279 aaPredicted RBP2.63□□□□□ -1.99
HERPUD1-211ENST00000566550 TMEM230Q96A57 120 aa2.63□□□□□ -1.99
HERPUD1-211ENST00000566550 FLYWCH2Q96CP2 140 aaKnown RBP2.63□□□□□ -1.99
HERPUD1-211ENST00000566550 RCN3Q96D15 328 aa2.63□□□□□ -1.99
HERPUD1-211ENST00000566550 SMIM10Q96HG1 83 aa2.63□□□□□ -1.99
HERPUD1-211ENST00000566550 ZNF488Q96MN9 340 aa2.63□□□□□ -1.99
HERPUD1-211ENST00000566550 ZNF681Q96N22 645 aa2.63□□□□□ -1.99
HERPUD1-211ENST00000566550 GABRG3Q99928 467 aa2.63□□□□□ -1.99
HERPUD1-211ENST00000566550 ATF6BQ99941 703 aa2.63□□□□□ -1.99
HERPUD1-211ENST00000566550 ZNF426Q9BUY5 554 aa2.63□□□□□ -1.99
HERPUD1-211ENST00000566550 REEP1Q9H902 201 aa2.63□□□□□ -1.99
HERPUD1-211ENST00000566550 JPT2Q9H910 190 aa2.63□□□□□ -1.99
HERPUD1-211ENST00000566550 SLC40A1Q9NP59 571 aa2.63□□□□□ -1.99
HERPUD1-211ENST00000566550 ACOT13Q9NPJ3 140 aa2.63□□□□□ -1.99
HERPUD1-211ENST00000566550 ASCL3Q9NQ33 180 aa2.63□□□□□ -1.99
HERPUD1-211ENST00000566550 FBXO8Q9NRD0 319 aa2.63□□□□□ -1.99
HERPUD1-211ENST00000566550 PLEKHJ1Q9NW61 149 aa2.63□□□□□ -1.99
HERPUD1-211ENST00000566550 BTNL2Q9UIR0 455 aa2.63□□□□□ -1.99
HERPUD1-211ENST00000566550 CES1P1Q9UKY3 287 aa2.63□□□□□ -1.99
HERPUD1-211ENST00000566550 RAB23Q9ULC3 237 aa2.63□□□□□ -1.99
HERPUD1-211ENST00000566550 SNX24Q9Y343 169 aa2.63□□□□□ -1.99
HERPUD1-211ENST00000566550 KLF12Q9Y4X4 402 aa2.63□□□□□ -1.99
HERPUD1-211ENST00000566550 AHDC1Q5TGY3 1603 aaPredicted RBP2.63□□□□□ -1.99
HERPUD1-211ENST00000566550 ELP1O95163 1332 aa2.63□□□□□ -1.99
HERPUD1-211ENST00000566550 FANCIQ9NVI1 1328 aa2.63□□□□□ -1.99
HERPUD1-211ENST00000566550 MYOM1P52179 1685 aa2.63□□□□□ -1.99
HERPUD1-211ENST00000566550 POLR3AO14802 1390 aaPredicted RBP2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 NPHP4O75161 1426 aaPredicted RBP2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 IGKV1D-13A0A0B4J2D9 117 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 IGHV3-16A0A0C4DH30 117 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 A0A1B0GTI1 187 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 OR6C70A6NIJ9 312 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 ZNF726A6NNF4 738 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 SYCE1LA8MT33 242 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 MPTX1A8MV57 137 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 GOLGA6L19H0YKK7 550 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 PLPP3O14495 311 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 GPR171O14626 319 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 AGPAT2O15120 278 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 ERI3O43414 337 aaKnown RBP2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 MPZL2O60487 215 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 RBBP9O75884 186 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 HPRT1P00492 218 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 IGKV2-30P06310 120 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 OCM2P0CE71 109 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 T-ENOLP0DO92 83 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 IGKV1-13P0DP09 117 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 GFAPP14136 432 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 IGLL1P15814 213 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 ZNF7P17097 686 aaPredicted RBP2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 USF1P22415 310 aaPredicted RBP2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 GPX4P36969 197 aaPredicted RBP2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 GLP1RP43220 463 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 GALR1P47211 349 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 RPL14P50914 215 aaKnown RBP2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 FABP6P51161 128 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 CEBPGP53567 150 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 AQP5P55064 265 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 AP1S2P56377 157 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 LINC00205P59089 165 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 ERVFC1-1P60608 527 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 DSTNP60981 165 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 MRPS25P82663 173 aaKnown RBP2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 HMGCS1Q01581 520 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 MXD1Q05195 221 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 CAPRIN1Q14444 709 aaKnown RBP2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 TGIF1Q15583 401 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 TRAM1Q15629 374 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 NHLRC3Q5JS37 347 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 ZNF506Q5JVG8 444 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms