RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 PROKR2Q8NFJ6 384 aa16.94■□□□□ 0.3
CLN6-207ENST00000566347 OR9Q2Q8NGE9 314 aa16.94■□□□□ 0.3
CLN6-207ENST00000566347 ZNF420Q8TAQ5 688 aaPredicted RBP16.94■□□□□ 0.3
CLN6-207ENST00000566347 SPTSSAQ969W0 71 aa16.94■□□□□ 0.3
CLN6-207ENST00000566347 BTBD10Q9BSF8 475 aa16.94■□□□□ 0.3
CLN6-207ENST00000566347 MRI1Q9BV20 369 aa16.94■□□□□ 0.3
CLN6-207ENST00000566347 MUC13Q9H3R2 512 aa16.94■□□□□ 0.3
CLN6-207ENST00000566347 NTN4Q9HB63 628 aa16.94■□□□□ 0.3
CLN6-207ENST00000566347 IL20Q9NYY1 176 aa16.94■□□□□ 0.3
CLN6-207ENST00000566347 INSIG2Q9Y5U4 225 aa16.94■□□□□ 0.3
CLN6-207ENST00000566347 AUP1Q9Y679 476 aa16.94■□□□□ 0.3
CLN6-207ENST00000566347 F5H5P2 479 aa16.93■□□□□ 0.3
CLN6-207ENST00000566347 M0R135 149 aa16.93■□□□□ 0.3
CLN6-207ENST00000566347 CCNB2O95067 398 aa16.93■□□□□ 0.3
CLN6-207ENST00000566347 ATP6V1B2P21281 511 aa16.93■□□□□ 0.3
CLN6-207ENST00000566347 GATA4P43694 442 aa16.93■□□□□ 0.3
CLN6-207ENST00000566347 COMPP49747 757 aaPredicted RBP16.93■□□□□ 0.3
CLN6-207ENST00000566347 SEC61A1P61619 476 aaKnown RBP16.93■□□□□ 0.3
CLN6-207ENST00000566347 RASSF6Q6ZTQ3 369 aa16.93■□□□□ 0.3
CLN6-207ENST00000566347 PGAP1Q75T13 922 aa16.93■□□□□ 0.3
CLN6-207ENST00000566347 MOGAT3Q86VF5 341 aa16.93■□□□□ 0.3
CLN6-207ENST00000566347 CELF2-AS1Q8N7Q2 184 aa16.93■□□□□ 0.3
CLN6-207ENST00000566347 GCDHQ92947 438 aaPredicted RBP16.93■□□□□ 0.3
CLN6-207ENST00000566347 ZNF799Q96GE5 643 aa16.93■□□□□ 0.3
CLN6-207ENST00000566347 MAP6Q96JE9 813 aa16.93■□□□□ 0.3
CLN6-207ENST00000566347 DDOQ99489 341 aa16.93■□□□□ 0.3
CLN6-207ENST00000566347 MAGIXQ9H6Y5 334 aa16.93■□□□□ 0.3
CLN6-207ENST00000566347 MIOXQ9UGB7 285 aa16.93■□□□□ 0.3
CLN6-207ENST00000566347 NOP16Q9Y3C1 178 aaKnown RBP16.93■□□□□ 0.3
CLN6-207ENST00000566347 CYB5R3P00387 301 aaPredicted RBP16.92■□□□□ 0.3
CLN6-207ENST00000566347 WNT2P09544 360 aa16.92■□□□□ 0.3
CLN6-207ENST00000566347 RPS2P15880 293 aaKnown RBP16.92■□□□□ 0.3
CLN6-207ENST00000566347 PYCR1P32322 319 aa16.92■□□□□ 0.3
CLN6-207ENST00000566347 ZNF770Q6IQ21 691 aaPredicted RBP16.92■□□□□ 0.3
CLN6-207ENST00000566347 MRPL21Q7Z2W9 205 aaKnown RBP16.92■□□□□ 0.3
CLN6-207ENST00000566347 CYB561A3Q8NBI2 242 aa16.92■□□□□ 0.3
CLN6-207ENST00000566347 OR4C15Q8NGM1 316 aa16.92■□□□□ 0.3
CLN6-207ENST00000566347 DVL3Q92997 716 aaPredicted RBP16.92■□□□□ 0.3
CLN6-207ENST00000566347 ERGIC1Q969X5 290 aa16.92■□□□□ 0.3
CLN6-207ENST00000566347 SLCO4A1Q96BD0 722 aa16.92■□□□□ 0.3
CLN6-207ENST00000566347 SSBP3Q9BWW4 388 aaPredicted RBP16.92■□□□□ 0.3
CLN6-207ENST00000566347 PLA2G12AQ9BZM1 189 aa16.92■□□□□ 0.3
CLN6-207ENST00000566347 SLC22A4Q9H015 551 aa16.92■□□□□ 0.3
CLN6-207ENST00000566347 TMEM165Q9HC07 324 aa16.92■□□□□ 0.3
CLN6-207ENST00000566347 DDX28Q9NUL7 540 aaKnown RBP16.92■□□□□ 0.3
CLN6-207ENST00000566347 TBC1D23Q9NUY8 699 aa16.92■□□□□ 0.3
CLN6-207ENST00000566347 NUP50Q9UKX7 468 aa16.92■□□□□ 0.3
CLN6-207ENST00000566347 TMEM89A2RUT3 159 aa16.91■□□□□ 0.3
CLN6-207ENST00000566347 B2RBV5 119 aa16.91■□□□□ 0.3
CLN6-207ENST00000566347 GASTP01350 101 aa16.91■□□□□ 0.3
CLN6-207ENST00000566347 HLA-DPB1P04440 258 aa16.91■□□□□ 0.3
CLN6-207ENST00000566347 IRF2P14316 349 aa16.91■□□□□ 0.3
CLN6-207ENST00000566347 CFPP27918 469 aa16.91■□□□□ 0.3
CLN6-207ENST00000566347 RBMS3Q6XE24 437 aaKnown RBP16.91■□□□□ 0.3
CLN6-207ENST00000566347 NAA40Q86UY6 237 aa16.91■□□□□ 0.3
CLN6-207ENST00000566347 DHFR2Q86XF0 187 aa16.91■□□□□ 0.3
CLN6-207ENST00000566347 LNX2Q8N448 690 aa16.91■□□□□ 0.3
CLN6-207ENST00000566347 AQP11Q8NBQ7 271 aa16.91■□□□□ 0.3
CLN6-207ENST00000566347 SLC37A3Q8NCC5 494 aa16.91■□□□□ 0.3
CLN6-207ENST00000566347 SPRYD4Q8WW59 207 aaPredicted RBP16.91■□□□□ 0.3
CLN6-207ENST00000566347 PLEKHA8Q96JA3 519 aa16.91■□□□□ 0.3
CLN6-207ENST00000566347 BAIAP2Q9UQB8 552 aa16.91■□□□□ 0.3
CLN6-207ENST00000566347 IGHV3-64DA0A0J9YX35 117 aa16.9■□□□□ 0.3
CLN6-207ENST00000566347 TCRBV5S2A0A599 114 aa16.9■□□□□ 0.3
CLN6-207ENST00000566347 ZNF205O95201 554 aa16.9■□□□□ 0.3
CLN6-207ENST00000566347 OTX1P32242 354 aaPredicted RBP16.9■□□□□ 0.3
CLN6-207ENST00000566347 CD200P41217 278 aa16.9■□□□□ 0.3
CLN6-207ENST00000566347 RAD23AP54725 363 aa16.9■□□□□ 0.3
CLN6-207ENST00000566347 ZNF404Q494X3 552 aa16.9■□□□□ 0.3
CLN6-207ENST00000566347 ZNF362Q5T0B9 420 aaPredicted RBP16.9■□□□□ 0.3
CLN6-207ENST00000566347 LCN8Q6JVE9 175 aa16.9■□□□□ 0.3
CLN6-207ENST00000566347 DRAM2Q6UX65 266 aa16.9■□□□□ 0.3
CLN6-207ENST00000566347 NLRC3Q7RTR2 1065 aa16.9■□□□□ 0.3
CLN6-207ENST00000566347 KLBQ86Z14 1044 aa16.9■□□□□ 0.3
CLN6-207ENST00000566347 FITM2Q8N6M3 262 aa16.9■□□□□ 0.3
CLN6-207ENST00000566347 OR8D4Q8NGM9 314 aa16.9■□□□□ 0.3
CLN6-207ENST00000566347 OR10S1Q8NGN2 331 aa16.9■□□□□ 0.3
CLN6-207ENST00000566347 OR11L1Q8NGX0 322 aa16.9■□□□□ 0.3
CLN6-207ENST00000566347 Q8TCH9 128 aa16.9■□□□□ 0.3
CLN6-207ENST00000566347 C22orf15Q8WYQ4 148 aa16.9■□□□□ 0.3
CLN6-207ENST00000566347 NEIL1Q96FI4 390 aaPredicted RBP16.9■□□□□ 0.3
CLN6-207ENST00000566347 NSL1Q96IY1 281 aa16.9■□□□□ 0.3
CLN6-207ENST00000566347 TMEM246Q9BRR3 403 aa16.9■□□□□ 0.3
CLN6-207ENST00000566347 TSSK6Q9BXA6 273 aa16.9■□□□□ 0.3
CLN6-207ENST00000566347 REEP1Q9H902 201 aa16.9■□□□□ 0.3
CLN6-207ENST00000566347 PPIAL4AQ9Y536 164 aa16.9■□□□□ 0.3
CLN6-207ENST00000566347 COMMD3-BMI1R4GMX3 469 aa16.9■□□□□ 0.3
CLN6-207ENST00000566347 DOCK11Q5JSL3 2073 aa16.9■□□□□ 0.3
CLN6-207ENST00000566347 TVP23AA6NH52 213 aa16.89■□□□□ 0.29
CLN6-207ENST00000566347 PPIAL4GP0DN37 164 aa16.89■□□□□ 0.29
CLN6-207ENST00000566347 FMO3P31513 532 aa16.89■□□□□ 0.29
CLN6-207ENST00000566347 RPS27P42677 84 aaKnown RBP16.89■□□□□ 0.29
CLN6-207ENST00000566347 PRSS12P56730 875 aa16.89■□□□□ 0.29
CLN6-207ENST00000566347 GNB2P62879 340 aa16.89■□□□□ 0.29
CLN6-207ENST00000566347 PAX8Q06710 450 aa16.89■□□□□ 0.29
CLN6-207ENST00000566347 MAB21L1Q13394 359 aa16.89■□□□□ 0.29
CLN6-207ENST00000566347 TRIM25Q14258 630 aaKnown RBP16.89■□□□□ 0.29
CLN6-207ENST00000566347 FAM98BQ52LJ0 330 aaKnown RBP16.89■□□□□ 0.29
CLN6-207ENST00000566347 OR2T5Q6IEZ7 315 aa16.89■□□□□ 0.29
CLN6-207ENST00000566347 BTNL3Q6UXE8 466 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms