RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 ESCO2Q56NI9 601 aa15.35■□□□□ 0.05
USB1-213ENST00000566292 ARMCX4Q5H9R4 360 aa15.35■□□□□ 0.05
USB1-213ENST00000566292 FAM201AQ5SY85 155 aa15.35■□□□□ 0.05
USB1-213ENST00000566292 C16orf89Q6UX73 402 aa15.35■□□□□ 0.05
USB1-213ENST00000566292 CYP2R1Q6VVX0 501 aa15.35■□□□□ 0.05
USB1-213ENST00000566292 CYB561A3Q8NBI2 242 aa15.35■□□□□ 0.05
USB1-213ENST00000566292 ZNRF4Q8WWF5 429 aa15.35■□□□□ 0.05
USB1-213ENST00000566292 GCDHQ92947 438 aaPredicted RBP15.35■□□□□ 0.05
USB1-213ENST00000566292 HCAR1Q9BXC0 346 aa15.35■□□□□ 0.05
USB1-213ENST00000566292 PLA2G12AQ9BZM1 189 aa15.35■□□□□ 0.05
USB1-213ENST00000566292 TMEM100Q9NV29 134 aa15.35■□□□□ 0.05
USB1-213ENST00000566292 LRCH1Q9Y2L9 728 aa15.35■□□□□ 0.05
USB1-213ENST00000566292 CDH10Q9Y6N8 788 aa15.35■□□□□ 0.05
USB1-213ENST00000566292 KRT36O76013 467 aa15.34■□□□□ 0.05
USB1-213ENST00000566292 LCATP04180 440 aa15.34■□□□□ 0.05
USB1-213ENST00000566292 PSKH1P11801 424 aa15.34■□□□□ 0.05
USB1-213ENST00000566292 ATP6V1B2P21281 511 aa15.34■□□□□ 0.05
USB1-213ENST00000566292 UBA52P62987 128 aaKnown RBP15.34■□□□□ 0.05
USB1-213ENST00000566292 PAX2Q02962 417 aa15.34■□□□□ 0.05
USB1-213ENST00000566292 MAB21L1Q13394 359 aa15.34■□□□□ 0.05
USB1-213ENST00000566292 ZNF181Q2M3W8 571 aa15.34■□□□□ 0.05
USB1-213ENST00000566292 SPATS1Q496A3 300 aa15.34■□□□□ 0.05
USB1-213ENST00000566292 ZNF362Q5T0B9 420 aaPredicted RBP15.34■□□□□ 0.05
USB1-213ENST00000566292 ZNF770Q6IQ21 691 aaPredicted RBP15.34■□□□□ 0.05
USB1-213ENST00000566292 LYPD4Q6UWN0 246 aa15.34■□□□□ 0.05
USB1-213ENST00000566292 SIGLECL1Q8N7X8 197 aa15.34■□□□□ 0.05
USB1-213ENST00000566292 OR4C15Q8NGM1 316 aa15.34■□□□□ 0.05
USB1-213ENST00000566292 OR8D4Q8NGM9 314 aa15.34■□□□□ 0.05
USB1-213ENST00000566292 SLCO4A1Q96BD0 722 aa15.34■□□□□ 0.05
USB1-213ENST00000566292 TMEM246Q9BRR3 403 aa15.34■□□□□ 0.05
USB1-213ENST00000566292 IL20Q9NYY1 176 aa15.34■□□□□ 0.05
USB1-213ENST00000566292 ZNF69Q9UC07 566 aa15.34■□□□□ 0.05
USB1-213ENST00000566292 KCNG2Q9UJ96 466 aa15.34■□□□□ 0.05
USB1-213ENST00000566292 NUP50Q9UKX7 468 aa15.34■□□□□ 0.05
USB1-213ENST00000566292 PPIAL4AQ9Y536 164 aa15.34■□□□□ 0.05
USB1-213ENST00000566292 TVP23AA6NH52 213 aa15.33■□□□□ 0.04
USB1-213ENST00000566292 TNFRSF11BO00300 401 aa15.33■□□□□ 0.04
USB1-213ENST00000566292 RPS2P15880 293 aaKnown RBP15.33■□□□□ 0.04
USB1-213ENST00000566292 CD80P33681 288 aa15.33■□□□□ 0.04
USB1-213ENST00000566292 GATA4P43694 442 aa15.33■□□□□ 0.04
USB1-213ENST00000566292 MXRA7P84157 204 aa15.33■□□□□ 0.04
USB1-213ENST00000566292 PAX8Q06710 450 aa15.33■□□□□ 0.04
USB1-213ENST00000566292 KLBQ86Z14 1044 aa15.33■□□□□ 0.04
USB1-213ENST00000566292 BCL6BQ8N143 479 aaPredicted RBP15.33■□□□□ 0.04
USB1-213ENST00000566292 OR52L1Q8NGH7 329 aa15.33■□□□□ 0.04
USB1-213ENST00000566292 MRI1Q9BV20 369 aa15.33■□□□□ 0.04
USB1-213ENST00000566292 SSBP3Q9BWW4 388 aaPredicted RBP15.33■□□□□ 0.04
USB1-213ENST00000566292 TRIM15Q9C019 465 aa15.33■□□□□ 0.04
USB1-213ENST00000566292 NTN4Q9HB63 628 aa15.33■□□□□ 0.04
USB1-213ENST00000566292 NDE1Q9NXR1 346 aa15.33■□□□□ 0.04
USB1-213ENST00000566292 ACTR3BQ9P1U1 418 aa15.33■□□□□ 0.04
USB1-213ENST00000566292 OR5V1Q9UGF6 321 aa15.33■□□□□ 0.04
USB1-213ENST00000566292 C5orf63A6NC05 138 aa15.32■□□□□ 0.04
USB1-213ENST00000566292 M0R135 149 aa15.32■□□□□ 0.04
USB1-213ENST00000566292 DCTN3O75935 186 aa15.32■□□□□ 0.04
USB1-213ENST00000566292 FSTL3O95633 263 aa15.32■□□□□ 0.04
USB1-213ENST00000566292 GASTP01350 101 aa15.32■□□□□ 0.04
USB1-213ENST00000566292 ZNF823P16415 610 aa15.32■□□□□ 0.04
USB1-213ENST00000566292 MAGEA2P43356 314 aa15.32■□□□□ 0.04
USB1-213ENST00000566292 TPTEP56180 551 aa15.32■□□□□ 0.04
USB1-213ENST00000566292 PPP1R8Q12972 351 aaKnown RBP15.32■□□□□ 0.04
USB1-213ENST00000566292 MALLQ13021 153 aa15.32■□□□□ 0.04
USB1-213ENST00000566292 SNAI3Q3KNW1 292 aa15.32■□□□□ 0.04
USB1-213ENST00000566292 ZNF404Q494X3 552 aa15.32■□□□□ 0.04
USB1-213ENST00000566292 RPL13AP3Q6NVV1 102 aa15.32■□□□□ 0.04
USB1-213ENST00000566292 CELF2-AS1Q8N7Q2 184 aa15.32■□□□□ 0.04
USB1-213ENST00000566292 SLC37A3Q8NCC5 494 aa15.32■□□□□ 0.04
USB1-213ENST00000566292 PROKR2Q8NFJ6 384 aa15.32■□□□□ 0.04
USB1-213ENST00000566292 OR51L1Q8NGJ5 315 aa15.32■□□□□ 0.04
USB1-213ENST00000566292 DACT3Q96B18 629 aaPredicted RBP15.32■□□□□ 0.04
USB1-213ENST00000566292 ZNF799Q96GE5 643 aa15.32■□□□□ 0.04
USB1-213ENST00000566292 DDX28Q9NUL7 540 aaKnown RBP15.32■□□□□ 0.04
USB1-213ENST00000566292 VNN3Q9NY84 501 aa15.32■□□□□ 0.04
USB1-213ENST00000566292 MIOXQ9UGB7 285 aa15.32■□□□□ 0.04
USB1-213ENST00000566292 TCRBV5S2A0A599 114 aa15.31■□□□□ 0.04
USB1-213ENST00000566292 LRRC30A6NM36 301 aa15.31■□□□□ 0.04
USB1-213ENST00000566292 CPT2P23786 658 aa15.31■□□□□ 0.04
USB1-213ENST00000566292 OTX1P32242 354 aaPredicted RBP15.31■□□□□ 0.04
USB1-213ENST00000566292 CD200P41217 278 aa15.31■□□□□ 0.04
USB1-213ENST00000566292 RAD23AP54725 363 aa15.31■□□□□ 0.04
USB1-213ENST00000566292 ZNF92Q03936 586 aa15.31■□□□□ 0.04
USB1-213ENST00000566292 PRAMEF6Q5VXH4 476 aa15.31■□□□□ 0.04
USB1-213ENST00000566292 RASSF6Q6ZTQ3 369 aa15.31■□□□□ 0.04
USB1-213ENST00000566292 PGAP1Q75T13 922 aa15.31■□□□□ 0.04
USB1-213ENST00000566292 DOK3Q7L591 496 aa15.31■□□□□ 0.04
USB1-213ENST00000566292 C1orf87Q8N0U7 546 aa15.31■□□□□ 0.04
USB1-213ENST00000566292 LINC00471Q8N535 108 aa15.31■□□□□ 0.04
USB1-213ENST00000566292 OR9Q1Q8NGQ5 310 aa15.31■□□□□ 0.04
USB1-213ENST00000566292 OR2T4Q8NH00 348 aa15.31■□□□□ 0.04
USB1-213ENST00000566292 Q8TCH9 128 aa15.31■□□□□ 0.04
USB1-213ENST00000566292 NEIL1Q96FI4 390 aaPredicted RBP15.31■□□□□ 0.04
USB1-213ENST00000566292 C1orf147Q96MC9 270 aaPredicted RBP15.31■□□□□ 0.04
USB1-213ENST00000566292 ZNF48Q96MX3 618 aaPredicted RBP15.31■□□□□ 0.04
USB1-213ENST00000566292 COMMD3-BMI1R4GMX3 469 aa15.31■□□□□ 0.04
USB1-213ENST00000566292 IGHV2-70DA0A0C4DH43 119 aa15.3■□□□□ 0.04
USB1-213ENST00000566292 FAM20BO75063 409 aa15.3■□□□□ 0.04
USB1-213ENST00000566292 CCNB2O95067 398 aa15.3■□□□□ 0.04
USB1-213ENST00000566292 GNB2P62879 340 aa15.3■□□□□ 0.04
USB1-213ENST00000566292 HOXA4Q00056 320 aaPredicted RBP15.3■□□□□ 0.04
USB1-213ENST00000566292 MPPED2Q15777 294 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms