RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 TPTEP56180 551 aa11.79□□□□□ -0.52
HERPUD1-210ENST00000565966 CDC42P60953 191 aa11.79□□□□□ -0.52
HERPUD1-210ENST00000565966 ELF3P78545 371 aaPredicted RBP11.79□□□□□ -0.52
HERPUD1-210ENST00000565966 MRPS11P82912 194 aaKnown RBP11.79□□□□□ -0.52
HERPUD1-210ENST00000565966 KRTAP1-1Q07627 177 aa11.79□□□□□ -0.52
HERPUD1-210ENST00000565966 PSG7Q13046 419 aa11.79□□□□□ -0.52
HERPUD1-210ENST00000565966 TRIP10Q15642 601 aa11.79□□□□□ -0.52
HERPUD1-210ENST00000565966 SPATC1Q76KD6 591 aa11.79□□□□□ -0.52
HERPUD1-210ENST00000565966 SLC16A9Q7RTY1 509 aa11.79□□□□□ -0.52
HERPUD1-210ENST00000565966 OR8J1Q8NGP2 316 aa11.79□□□□□ -0.52
HERPUD1-210ENST00000565966 FAM81AQ8TBF8 368 aa11.79□□□□□ -0.52
HERPUD1-210ENST00000565966 RNF133Q8WVZ7 376 aa11.79□□□□□ -0.52
HERPUD1-210ENST00000565966 RDH5Q92781 318 aa11.79□□□□□ -0.52
HERPUD1-210ENST00000565966 UBE2FQ969M7 185 aa11.79□□□□□ -0.52
HERPUD1-210ENST00000565966 ZNF799Q96GE5 643 aa11.79□□□□□ -0.52
HERPUD1-210ENST00000565966 COPS4Q9BT78 406 aa11.79□□□□□ -0.52
HERPUD1-210ENST00000565966 BPESC1Q9GZL8 116 aa11.79□□□□□ -0.52
HERPUD1-210ENST00000565966 PTTG3PQ9NZH4 202 aa11.79□□□□□ -0.52
HERPUD1-210ENST00000565966 FN1P02751 2386 aaKnown RBP11.79□□□□□ -0.52
HERPUD1-210ENST00000565966 SONP18583 2426 aaKnown RBP11.78□□□□□ -0.52
HERPUD1-210ENST00000565966 LYNX1G3V0Z9 82 aa11.78□□□□□ -0.52
HERPUD1-210ENST00000565966 CD5LO43866 347 aa11.78□□□□□ -0.52
HERPUD1-210ENST00000565966 NCR1O76036 304 aa11.78□□□□□ -0.52
HERPUD1-210ENST00000565966 LYNP07948 512 aa11.78□□□□□ -0.52
HERPUD1-210ENST00000565966 MRPL3P09001 348 aaKnown RBP11.78□□□□□ -0.52
HERPUD1-210ENST00000565966 LYNX1P0DP58 116 aa11.78□□□□□ -0.52
HERPUD1-210ENST00000565966 KITLGP21583 273 aa11.78□□□□□ -0.52
HERPUD1-210ENST00000565966 ACHEP22303 614 aa11.78□□□□□ -0.52
HERPUD1-210ENST00000565966 PRKXP51817 358 aa11.78□□□□□ -0.52
HERPUD1-210ENST00000565966 HCCSP53701 268 aa11.78□□□□□ -0.52
HERPUD1-210ENST00000565966 CCL8P80075 99 aa11.78□□□□□ -0.52
HERPUD1-210ENST00000565966 RIN1Q13671 783 aa11.78□□□□□ -0.52
HERPUD1-210ENST00000565966 GGTLC2Q14390 218 aa11.78□□□□□ -0.52
HERPUD1-210ENST00000565966 TAF13Q15543 124 aa11.78□□□□□ -0.52
HERPUD1-210ENST00000565966 TMEM249Q2WGJ8 235 aa11.78□□□□□ -0.52
HERPUD1-210ENST00000565966 FAM209AQ5JX71 171 aa11.78□□□□□ -0.52
HERPUD1-210ENST00000565966 LPCAT4Q643R3 524 aa11.78□□□□□ -0.52
HERPUD1-210ENST00000565966 GID4Q8IVV7 300 aa11.78□□□□□ -0.52
HERPUD1-210ENST00000565966 ZNF454Q8N9F8 522 aa11.78□□□□□ -0.52
HERPUD1-210ENST00000565966 THEM6Q8WUY1 208 aa11.78□□□□□ -0.52
HERPUD1-210ENST00000565966 GTF3AQ92664 365 aaKnown RBP11.78□□□□□ -0.52
HERPUD1-210ENST00000565966 HAVCR1Q96D42 359 aa11.78□□□□□ -0.52
HERPUD1-210ENST00000565966 CMBLQ96DG6 245 aa11.78□□□□□ -0.52
HERPUD1-210ENST00000565966 KCNJ15Q99712 375 aa11.78□□□□□ -0.52
HERPUD1-210ENST00000565966 YIPF3Q9GZM5 350 aa11.78□□□□□ -0.52
HERPUD1-210ENST00000565966 CHODLQ9H9P2 273 aa11.78□□□□□ -0.52
HERPUD1-210ENST00000565966 DECR2Q9NUI1 292 aa11.78□□□□□ -0.52
HERPUD1-210ENST00000565966 PURGQ9UJV8 347 aaKnown RBP11.78□□□□□ -0.52
HERPUD1-210ENST00000565966 KLHDC2Q9Y2U9 406 aa11.78□□□□□ -0.52
HERPUD1-210ENST00000565966 SLC22A31A6NKX4 558 aa11.77□□□□□ -0.53
HERPUD1-210ENST00000565966 DLGAP1O14490 977 aa11.77□□□□□ -0.53
HERPUD1-210ENST00000565966 TPD52L2O43399 206 aaKnown RBP11.77□□□□□ -0.53
HERPUD1-210ENST00000565966 SPRY3O43610 288 aa11.77□□□□□ -0.53
HERPUD1-210ENST00000565966 TIMM8AO60220 97 aaPredicted RBP11.77□□□□□ -0.53
HERPUD1-210ENST00000565966 LCATP04180 440 aa11.77□□□□□ -0.53
HERPUD1-210ENST00000565966 ADH4P08319 380 aa11.77□□□□□ -0.53
HERPUD1-210ENST00000565966 RAC2P15153 192 aa11.77□□□□□ -0.53
HERPUD1-210ENST00000565966 ALOX5APP20292 161 aa11.77□□□□□ -0.53
HERPUD1-210ENST00000565966 ANOS1P23352 680 aa11.77□□□□□ -0.53
HERPUD1-210ENST00000565966 OPRL1P41146 370 aa11.77□□□□□ -0.53
HERPUD1-210ENST00000565966 SLC15A1P46059 708 aa11.77□□□□□ -0.53
HERPUD1-210ENST00000565966 TMEM33P57088 247 aa11.77□□□□□ -0.53
HERPUD1-210ENST00000565966 GRB2P62993 217 aaKnown RBP11.77□□□□□ -0.53
HERPUD1-210ENST00000565966 HLXQ14774 488 aaPredicted RBP11.77□□□□□ -0.53
HERPUD1-210ENST00000565966 TSTQ16762 297 aaKnown RBP11.77□□□□□ -0.53
HERPUD1-210ENST00000565966 LRRC36Q1X8D7 754 aa11.77□□□□□ -0.53
HERPUD1-210ENST00000565966 ZMAT1Q5H9K5 638 aa11.77□□□□□ -0.53
HERPUD1-210ENST00000565966 DRAM2Q6UX65 266 aa11.77□□□□□ -0.53
HERPUD1-210ENST00000565966 FBXW12Q6X9E4 464 aa11.77□□□□□ -0.53
HERPUD1-210ENST00000565966 RHOUQ7L0Q8 258 aa11.77□□□□□ -0.53
HERPUD1-210ENST00000565966 GALNT4Q8N4A0 578 aa11.77□□□□□ -0.53
HERPUD1-210ENST00000565966 ZNF283Q8N7M2 679 aa11.77□□□□□ -0.53
HERPUD1-210ENST00000565966 TRUB1Q8WWH5 349 aaKnown RBP11.77□□□□□ -0.53
HERPUD1-210ENST00000565966 ZNF582Q96NG8 517 aaPredicted RBP11.77□□□□□ -0.53
HERPUD1-210ENST00000565966 DIRC2Q96SL1 478 aa11.77□□□□□ -0.53
HERPUD1-210ENST00000565966 IMPAD1Q9NX62 359 aa11.77□□□□□ -0.53
HERPUD1-210ENST00000565966 HAO2Q9NYQ3 351 aa11.77□□□□□ -0.53
HERPUD1-210ENST00000565966 DNAJC27Q9NZQ0 273 aa11.77□□□□□ -0.53
HERPUD1-210ENST00000565966 ZDHHC8Q9ULC8 765 aa11.77□□□□□ -0.53
HERPUD1-210ENST00000565966 GMPPBQ9Y5P6 360 aa11.77□□□□□ -0.53
HERPUD1-210ENST00000565966 IGHV4-61A0A0C4DH41 118 aa11.76□□□□□ -0.53
HERPUD1-210ENST00000565966 C5orf63A6NC05 138 aa11.76□□□□□ -0.53
HERPUD1-210ENST00000565966 CASQ2O14958 399 aaPredicted RBP11.76□□□□□ -0.53
HERPUD1-210ENST00000565966 IGHV1-46P01743 117 aa11.76□□□□□ -0.53
HERPUD1-210ENST00000565966 TACSTD2P09758 323 aa11.76□□□□□ -0.53
HERPUD1-210ENST00000565966 H2BFMP0C1H6 154 aa11.76□□□□□ -0.53
HERPUD1-210ENST00000565966 SLC2A1P11166 492 aa11.76□□□□□ -0.53
HERPUD1-210ENST00000565966 PEX2P28328 305 aa11.76□□□□□ -0.53
HERPUD1-210ENST00000565966 HTR1FP30939 366 aa11.76□□□□□ -0.53
HERPUD1-210ENST00000565966 CRYBB2P43320 205 aa11.76□□□□□ -0.53
HERPUD1-210ENST00000565966 SLC6A9P48067 706 aa11.76□□□□□ -0.53
HERPUD1-210ENST00000565966 SNRPGP62308 76 aaKnown RBP11.76□□□□□ -0.53
HERPUD1-210ENST00000565966 SNAI3Q3KNW1 292 aa11.76□□□□□ -0.53
HERPUD1-210ENST00000565966 CYB5R2Q6BCY4 276 aa11.76□□□□□ -0.53
HERPUD1-210ENST00000565966 YIPF5Q969M3 257 aa11.76□□□□□ -0.53
HERPUD1-210ENST00000565966 RDH12Q96NR8 316 aa11.76□□□□□ -0.53
HERPUD1-210ENST00000565966 CNN2Q99439 309 aaKnown RBP11.76□□□□□ -0.53
HERPUD1-210ENST00000565966 EGLN1Q9GZT9 426 aa11.76□□□□□ -0.53
HERPUD1-210ENST00000565966 DCLRE1BQ9H816 532 aa11.76□□□□□ -0.53
HERPUD1-210ENST00000565966 SAP30LQ9HAJ7 183 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms