RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 CCDC172P0C7W6 258 aa3.01□□□□□ -1.93
LINC00560-201ENST00000564593 ZNF250P15622 560 aa3.01□□□□□ -1.93
LINC00560-201ENST00000564593 TCP1P17987 556 aaKnown RBP3.01□□□□□ -1.93
LINC00560-201ENST00000564593 AQP2P41181 271 aa3.01□□□□□ -1.93
LINC00560-201ENST00000564593 ZNF136P52737 540 aa3.01□□□□□ -1.93
LINC00560-201ENST00000564593 UCNP55089 124 aa3.01□□□□□ -1.93
LINC00560-201ENST00000564593 KRTAP12-2P59991 146 aa3.01□□□□□ -1.93
LINC00560-201ENST00000564593 ADARB1P78563 741 aaKnown RBP3.01□□□□□ -1.93
LINC00560-201ENST00000564593 PAX5Q02548 391 aa3.01□□□□□ -1.93
LINC00560-201ENST00000564593 PON3Q15166 354 aa3.01□□□□□ -1.93
LINC00560-201ENST00000564593 SPANXN2Q5MJ10 180 aa3.01□□□□□ -1.93
LINC00560-201ENST00000564593 PPM1LQ5SGD2 360 aa3.01□□□□□ -1.93
LINC00560-201ENST00000564593 TSPO2Q5TGU0 170 aa3.01□□□□□ -1.93
LINC00560-201ENST00000564593 CERS6Q6ZMG9 384 aa3.01□□□□□ -1.93
LINC00560-201ENST00000564593 ZNF493Q6ZR52 646 aa3.01□□□□□ -1.93
LINC00560-201ENST00000564593 ABHD13Q7L211 337 aa3.01□□□□□ -1.93
LINC00560-201ENST00000564593 OTUD6AQ7L8S5 288 aa3.01□□□□□ -1.93
LINC00560-201ENST00000564593 OAFQ86UD1 273 aa3.01□□□□□ -1.93
LINC00560-201ENST00000564593 OR4A4PQ8NGN8 299 aa3.01□□□□□ -1.93
LINC00560-201ENST00000564593 OR5B3Q8NH48 314 aa3.01□□□□□ -1.93
LINC00560-201ENST00000564593 MCUR1Q96AQ8 359 aa3.01□□□□□ -1.93
LINC00560-201ENST00000564593 FAM3DQ96BQ1 224 aa3.01□□□□□ -1.93
LINC00560-201ENST00000564593 ZNF285Q96NJ3 590 aa3.01□□□□□ -1.93
LINC00560-201ENST00000564593 SERPINB12Q96P63 405 aa3.01□□□□□ -1.93
LINC00560-201ENST00000564593 SDHCQ99643 169 aaPredicted RBP3.01□□□□□ -1.93
LINC00560-201ENST00000564593 MRPL37Q9BZE1 423 aaKnown RBP3.01□□□□□ -1.93
LINC00560-201ENST00000564593 DDX18Q9NVP1 670 aaKnown RBP3.01□□□□□ -1.93
LINC00560-201ENST00000564593 RBAKQ9NYW8 714 aaPredicted RBP3.01□□□□□ -1.93
LINC00560-201ENST00000564593 MRPS18BQ9Y676 258 aaKnown RBP3.01□□□□□ -1.93
LINC00560-201ENST00000564593 SAR1BQ9Y6B6 198 aa3.01□□□□□ -1.93
LINC00560-201ENST00000564593 PSME4Q14997 1843 aa3.01□□□□□ -1.93
LINC00560-201ENST00000564593 GOLGA6L10A6NI86 522 aa3□□□□□ -1.93
LINC00560-201ENST00000564593 DNALI1O14645 258 aaPredicted RBP3□□□□□ -1.93
LINC00560-201ENST00000564593 CDH16O75309 829 aa3□□□□□ -1.93
LINC00560-201ENST00000564593 PLEKHA8P1O95397 391 aa3□□□□□ -1.93
LINC00560-201ENST00000564593 H6PDO95479 791 aa3□□□□□ -1.93
LINC00560-201ENST00000564593 GYPCP04921 128 aa3□□□□□ -1.93
LINC00560-201ENST00000564593 SERPINA5P05154 406 aa3□□□□□ -1.93
LINC00560-201ENST00000564593 OMGP23515 440 aa3□□□□□ -1.93
LINC00560-201ENST00000564593 OTX1P32242 354 aaPredicted RBP3□□□□□ -1.93
LINC00560-201ENST00000564593 CCT6AP40227 531 aaKnown RBP3□□□□□ -1.93
LINC00560-201ENST00000564593 UBE2AP49459 152 aa3□□□□□ -1.93
LINC00560-201ENST00000564593 HERVK_113P61574 105 aa3□□□□□ -1.93
LINC00560-201ENST00000564593 TCP10Q12799 353 aa3□□□□□ -1.93
LINC00560-201ENST00000564593 ZSCAN26Q16670 478 aa3□□□□□ -1.93
LINC00560-201ENST00000564593 ALKBH6Q3KRA9 238 aa3□□□□□ -1.93
LINC00560-201ENST00000564593 SOHLH1Q5JUK2 328 aa3□□□□□ -1.93
LINC00560-201ENST00000564593 CCDC122Q5T0U0 273 aa3□□□□□ -1.93
LINC00560-201ENST00000564593 AGBL2Q5U5Z8 902 aa3□□□□□ -1.93
LINC00560-201ENST00000564593 ANKRD22Q5VYY1 191 aa3□□□□□ -1.93
LINC00560-201ENST00000564593 REEP3Q6NUK4 255 aa3□□□□□ -1.93
LINC00560-201ENST00000564593 Q6P435 159 aa3□□□□□ -1.93
LINC00560-201ENST00000564593 C16orf87Q6PH81 154 aa3□□□□□ -1.93
LINC00560-201ENST00000564593 SLC16A14Q7RTX9 510 aa3□□□□□ -1.93
LINC00560-201ENST00000564593 MMAAQ8IVH4 418 aaKnown RBP3□□□□□ -1.93
LINC00560-201ENST00000564593 STPG2Q8N412 459 aa3□□□□□ -1.93
LINC00560-201ENST00000564593 RNF10Q8N5U6 811 aaKnown RBP3□□□□□ -1.93
LINC00560-201ENST00000564593 CCDC42Q96M95 316 aa3□□□□□ -1.93
LINC00560-201ENST00000564593 PANX1Q96RD7 426 aa3□□□□□ -1.93
LINC00560-201ENST00000564593 PLA2G2FQ9BZM2 168 aa3□□□□□ -1.93
LINC00560-201ENST00000564593 IFI27L2Q9H2X8 130 aa3□□□□□ -1.93
LINC00560-201ENST00000564593 LZTFL1Q9NQ48 299 aa3□□□□□ -1.93
LINC00560-201ENST00000564593 ZNF629Q9UEG4 869 aaPredicted RBP3□□□□□ -1.93
LINC00560-201ENST00000564593 VANGL2Q9ULK5 521 aa3□□□□□ -1.93
LINC00560-201ENST00000564593 BZW2Q9Y6E2 419 aaKnown RBP3□□□□□ -1.93
LINC00560-201ENST00000564593 SRCAPQ6ZRS2 3230 aa3□□□□□ -1.93
LINC00560-201ENST00000564593 IGLV2-33A0A075B6J2 118 aaPredicted RBP3□□□□□ -1.93
LINC00560-201ENST00000564593 A0A096LNJ9 63 aa3□□□□□ -1.93
LINC00560-201ENST00000564593 SPECC1L-ADORA2AF8WAN1 911 aa3□□□□□ -1.93
LINC00560-201ENST00000564593 H0YC42 278 aa3□□□□□ -1.93
LINC00560-201ENST00000564593 EIF3HO15372 352 aaKnown RBP eCLIP3□□□□□ -1.93
LINC00560-201ENST00000564593 DPM1O60762 260 aa3□□□□□ -1.93
LINC00560-201ENST00000564593 ASGR1P07306 291 aa3□□□□□ -1.93
LINC00560-201ENST00000564593 SLC1A1P43005 524 aa3□□□□□ -1.93
LINC00560-201ENST00000564593 CYB561P49447 251 aa3□□□□□ -1.93
LINC00560-201ENST00000564593 RAB10P61026 200 aa3□□□□□ -1.93
LINC00560-201ENST00000564593 RPS15P62841 145 aaKnown RBP3□□□□□ -1.93
LINC00560-201ENST00000564593 TNNC1P63316 161 aa3□□□□□ -1.93
LINC00560-201ENST00000564593 KCTD19Q17RG1 926 aaPredicted RBP3□□□□□ -1.93
LINC00560-201ENST00000564593 C22orf42Q6IC83 251 aa3□□□□□ -1.93
LINC00560-201ENST00000564593 Q6ZVH6 145 aa3□□□□□ -1.93
LINC00560-201ENST00000564593 CROCCP2Q86T23 111 aa3□□□□□ -1.93
LINC00560-201ENST00000564593 LINC01551Q86U37 167 aa3□□□□□ -1.93
LINC00560-201ENST00000564593 PCP2Q8IVA1 136 aa3□□□□□ -1.93
LINC00560-201ENST00000564593 SYCE1Q8N0S2 351 aa3□□□□□ -1.93
LINC00560-201ENST00000564593 LKAAEAR1Q8TD35 194 aa3□□□□□ -1.93
LINC00560-201ENST00000564593 FAM104AQ969W3 186 aa3□□□□□ -1.93
LINC00560-201ENST00000564593 OR5B12Q96R08 314 aa3□□□□□ -1.93
LINC00560-201ENST00000564593 TGS1Q96RS0 853 aaKnown RBP3□□□□□ -1.93
LINC00560-201ENST00000564593 COA1Q9GZY4 146 aa3□□□□□ -1.93
LINC00560-201ENST00000564593 LINC00597Q9H2U6 94 aa3□□□□□ -1.93
LINC00560-201ENST00000564593 CRLF2Q9HC73 371 aa3□□□□□ -1.93
LINC00560-201ENST00000564593 HYOU1Q9Y4L1 999 aa3□□□□□ -1.93
LINC00560-201ENST00000564593 NRXN2Q9P2S2 1712 aa2.99□□□□□ -1.93
LINC00560-201ENST00000564593 GAKO14976 1311 aa2.99□□□□□ -1.93
LINC00560-201ENST00000564593 ERICH4A6NGS2 130 aa2.99□□□□□ -1.93
LINC00560-201ENST00000564593 GOLGA8KD6RF30 607 aa2.99□□□□□ -1.93
LINC00560-201ENST00000564593 SIRPB1O00241 398 aa2.99□□□□□ -1.93
LINC00560-201ENST00000564593 CALUO43852 315 aaPredicted RBP2.99□□□□□ -1.93
LINC00560-201ENST00000564593 FLOT1O75955 427 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms