RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, human

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD9-210	ENST00000564582	OR5T1	Q8NG75	326 aa		4.98	□□□□□ -1.61
CHD9-210	ENST00000564582	OR4K1	Q8NGD4	311 aa		4.98	□□□□□ -1.61
CHD9-210	ENST00000564582	OR2D3	Q8NGH3	330 aa		4.98	□□□□□ -1.61
CHD9-210	ENST00000564582	OR10G4	Q8NGN3	311 aa		4.98	□□□□□ -1.61
CHD9-210	ENST00000564582	SVIP	Q8NHG7	77 aa		4.98	□□□□□ -1.61
CHD9-210	ENST00000564582	GPX8	Q8TED1	209 aa		4.98	□□□□□ -1.61
CHD9-210	ENST00000564582	ASB17	Q8WXJ9	295 aa		4.98	□□□□□ -1.61
CHD9-210	ENST00000564582	MR1	Q95460	341 aa		4.98	□□□□□ -1.61
CHD9-210	ENST00000564582	IGSF8	Q969P0	613 aa		4.98	□□□□□ -1.61
CHD9-210	ENST00000564582	MRPL38	Q96DV4	380 aa	Known RBP	4.98	□□□□□ -1.61
CHD9-210	ENST00000564582	SGCZ	Q96LD1	299 aa		4.98	□□□□□ -1.61
CHD9-210	ENST00000564582	WNT5B	Q9H1J7	359 aa		4.98	□□□□□ -1.61
CHD9-210	ENST00000564582	HIPK2	Q9H2X6	1198 aa		4.98	□□□□□ -1.61
CHD9-210	ENST00000564582	SRMS	Q9H3Y6	488 aa		4.98	□□□□□ -1.61
CHD9-210	ENST00000564582	PTGES2	Q9H7Z7	377 aa		4.98	□□□□□ -1.61
CHD9-210	ENST00000564582	BEX1	Q9HBH7	125 aa		4.98	□□□□□ -1.61
CHD9-210	ENST00000564582	HINT3	Q9NQE9	182 aa	Known RBP	4.98	□□□□□ -1.61
CHD9-210	ENST00000564582	CKLF	Q9UBR5	152 aa		4.98	□□□□□ -1.61
CHD9-210	ENST00000564582	KLK11	Q9UBX7	282 aa		4.98	□□□□□ -1.61
CHD9-210	ENST00000564582	IL20RA	Q9UHF4	553 aa		4.98	□□□□□ -1.61
CHD9-210	ENST00000564582	SLC25A13	Q9UJS0	675 aa		4.98	□□□□□ -1.61
CHD9-210	ENST00000564582	OR52A1	Q9UKL2	312 aa		4.98	□□□□□ -1.61
CHD9-210	ENST00000564582	GOLT1B	Q9Y3E0	138 aa		4.98	□□□□□ -1.61
CHD9-210	ENST00000564582	PCDHGA1	Q9Y5H4	931 aa		4.98	□□□□□ -1.61
CHD9-210	ENST00000564582	LOC285556	D6RIA3	1793 aa		4.98	□□□□□ -1.61
CHD9-210	ENST00000564582	BTAF1	O14981	1849 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	ALPK3	Q96L96	1907 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	TRAV14DV4	A0A0A6YYC5	116 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582		A0A1B0GV90	55 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582		A0A1W2PPQ1	181 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	SMIM30	A4D0T7	59 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	IQCF5	A8MTL0	148 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582		A8MWP6	167 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	STMND1	H3BQB6	276 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582		M0R036	132 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	PTGES	O14684	152 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	ITGB1BP1	O14713	200 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	LAT	O43561	262 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	ADAP1	O75689	374 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	FARS2	O95363	451 aa	Known RBP	4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	OR2C1	O95371	312 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	ACTL6A	O96019	429 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	HLA-A	P01891	365 aa	Known RBP	4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	OPN1LW	P04000	364 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	IFNA6	P05013	189 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	PIRT	P0C851	137 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	CTSA	P10619	480 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	ADRB3	P13945	408 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	CBR1	P16152	277 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	ADCYAP1	P18509	176 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	DRD1	P21728	446 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	ACKR3	P25106	362 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	TEAD1	P28347	426 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	CD80	P33681	288 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	MPI	P34949	423 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	AHR	P35869	848 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	SULT1A1	P50225	295 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	SNRPD1	P62314	119 aa	Known RBP	4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	TLE4	Q04727	773 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	GLO1	Q04760	184 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	DHRS2	Q13268	280 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	ALKBH1	Q13686	389 aa	Known RBP	4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	IHH	Q14623	411 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	CLINT1	Q14677	625 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	SURF2	Q15527	256 aa	Predicted RBP	4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	DUSP28	Q4G0W2	176 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	TMEM128	Q5BJH2	165 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	LY6G6F	Q5SQ64	297 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	MARCH8	Q5T0T0	291 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	GPR157	Q5UAW9	335 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	LIPN	Q5VXI9	398 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	C18orf63	Q68DL7	685 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	ADAM5	Q6NVV9	412 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	PLBD1	Q6P4A8	553 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	BTNL8	Q6UX41	500 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	CD300LG	Q6UXG3	332 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	FAM151B	Q6UXP7	276 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	NHLRC1	Q6VVB1	395 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	DPPA3	Q6W0C5	159 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	HEPN1	Q6WQI6	88 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	RBMS3	Q6XE24	437 aa	Known RBP	4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	PRSS45	Q7RTY3	260 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	SLC35E3	Q7Z769	313 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	TAF8	Q7Z7C8	310 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	TMEM150A	Q86TG1	271 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	ZFP82	Q8N141	532 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	OR2L13	Q8N349	312 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	ARRDC1	Q8N5I2	433 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	OR9K2	Q8NGE7	335 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	OR51S1	Q8NGJ8	323 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	OR13C8	Q8NGS7	320 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	DDB2	Q92466	427 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	GALNT14	Q96FL9	552 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	ACY3	Q96HD9	319 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	CASD1	Q96PB1	797 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	OR1F2P	Q96R84	312 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	CLCC1	Q96S66	551 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	NUDT22	Q9BRQ3	303 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	ANGPTL4	Q9BY76	406 aa		4.97	□□□□□ -1.61
CHD9-210	ENST00000564582	CTDSP1	Q9GZU7	261 aa		4.97	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms