RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 RAB3AP20336 220 aa1.72□□□□□ -2.13
CHD9-209ENST00000564255 CEACAM3P40198 252 aa1.72□□□□□ -2.13
CHD9-209ENST00000564255 PPP1CBP62140 327 aa1.72□□□□□ -2.13
CHD9-209ENST00000564255 PSMC5P62195 406 aa1.72□□□□□ -2.13
CHD9-209ENST00000564255 YWHAEP62258 255 aaKnown RBP1.72□□□□□ -2.13
CHD9-209ENST00000564255 TCP10Q12799 353 aa1.72□□□□□ -2.13
CHD9-209ENST00000564255 SLAQ13239 276 aa1.72□□□□□ -2.13
CHD9-209ENST00000564255 RCAN2Q14206 197 aa1.72□□□□□ -2.13
CHD9-209ENST00000564255 SYCP1Q15431 976 aa1.72□□□□□ -2.13
CHD9-209ENST00000564255 Q3ZCU0 254 aa1.72□□□□□ -2.13
CHD9-209ENST00000564255 RWDD4Q6NW29 188 aaKnown RBP1.72□□□□□ -2.13
CHD9-209ENST00000564255 PRMT9Q6P2P2 845 aa1.72□□□□□ -2.13
CHD9-209ENST00000564255 ARL9Q6T311 187 aa1.72□□□□□ -2.13
CHD9-209ENST00000564255 UNC93AQ86WB7 457 aa1.72□□□□□ -2.13
CHD9-209ENST00000564255 KIF2BQ8N4N8 673 aa1.72□□□□□ -2.13
CHD9-209ENST00000564255 C15orf56Q8N910 161 aa1.72□□□□□ -2.13
CHD9-209ENST00000564255 ZNF596Q8TC21 504 aa1.72□□□□□ -2.13
CHD9-209ENST00000564255 SUN5Q8TC36 379 aa1.72□□□□□ -2.13
CHD9-209ENST00000564255 MAP1LC3CQ9BXW4 147 aa1.72□□□□□ -2.13
CHD9-209ENST00000564255 RPP21Q9H633 154 aaKnown RBP1.72□□□□□ -2.13
CHD9-209ENST00000564255 ADA2Q9NZK5 511 aa1.72□□□□□ -2.13
CHD9-209ENST00000564255 UVRAGQ9P2Y5 699 aa1.72□□□□□ -2.13
CHD9-209ENST00000564255 PRG3Q9Y2Y8 225 aaPredicted RBP1.72□□□□□ -2.13
CHD9-209ENST00000564255 EIF4G3O43432 1585 aaKnown RBP1.72□□□□□ -2.13
CHD9-209ENST00000564255 DIP2BQ9P265 1576 aa1.72□□□□□ -2.13
CHD9-209ENST00000564255 BRD4O60885 1362 aaPredicted RBP1.72□□□□□ -2.13
CHD9-209ENST00000564255 SNAPC4Q5SXM2 1469 aa1.72□□□□□ -2.13
CHD9-209ENST00000564255 TEX14Q8IWB6 1497 aa1.72□□□□□ -2.13
CHD9-209ENST00000564255 HACD1B0YJ81 288 aa1.72□□□□□ -2.13
CHD9-209ENST00000564255 POLR3GO15318 223 aaPredicted RBP1.72□□□□□ -2.13
CHD9-209ENST00000564255 SLC19A2O60779 497 aa1.72□□□□□ -2.13
CHD9-209ENST00000564255 CTSLP07711 333 aa1.72□□□□□ -2.13
CHD9-209ENST00000564255 ERGP11308 486 aa1.72□□□□□ -2.13
CHD9-209ENST00000564255 CYB561P49447 251 aa1.72□□□□□ -2.13
CHD9-209ENST00000564255 ATP5J2P56134 94 aa1.72□□□□□ -2.13
CHD9-209ENST00000564255 CAPRIN1Q14444 709 aaKnown RBP1.72□□□□□ -2.13
CHD9-209ENST00000564255 RGNQ15493 299 aa1.72□□□□□ -2.13
CHD9-209ENST00000564255 CBR4Q8N4T8 237 aa1.72□□□□□ -2.13
CHD9-209ENST00000564255 COX18Q8N8Q8 333 aa1.72□□□□□ -2.13
CHD9-209ENST00000564255 DUSP18Q8NEJ0 188 aa1.72□□□□□ -2.13
CHD9-209ENST00000564255 NDNFQ8TB73 568 aa1.72□□□□□ -2.13
CHD9-209ENST00000564255 OR51E1Q8TCB6 317 aa1.72□□□□□ -2.13
CHD9-209ENST00000564255 TMEM158Q8WZ71 300 aa1.72□□□□□ -2.13
CHD9-209ENST00000564255 TFGQ92734 400 aaPredicted RBP1.72□□□□□ -2.13
CHD9-209ENST00000564255 SLC25A2Q9BXI2 301 aa1.72□□□□□ -2.13
CHD9-209ENST00000564255 PDFQ9HBH1 243 aa1.72□□□□□ -2.13
CHD9-209ENST00000564255 PALLDQ8WX93 1383 aa1.71□□□□□ -2.13
CHD9-209ENST00000564255 GLI2P10070 1586 aa1.71□□□□□ -2.14
CHD9-209ENST00000564255 MED1Q15648 1581 aaPredicted RBP1.71□□□□□ -2.14
CHD9-209ENST00000564255 A0A0B4J2E0 115 aa1.71□□□□□ -2.14
CHD9-209ENST00000564255 IGHV3-66A0A0C4DH42 116 aa1.71□□□□□ -2.14
CHD9-209ENST00000564255 SLC16A7O60669 478 aa1.71□□□□□ -2.14
CHD9-209ENST00000564255 RP2O75695 350 aa1.71□□□□□ -2.14
CHD9-209ENST00000564255 VAPBO95292 243 aa1.71□□□□□ -2.14
CHD9-209ENST00000564255 PCCAP05165 728 aaPredicted RBP1.71□□□□□ -2.14
CHD9-209ENST00000564255 GABRG2P18507 467 aa1.71□□□□□ -2.14
CHD9-209ENST00000564255 IL32P24001 234 aa1.71□□□□□ -2.14
CHD9-209ENST00000564255 MYCNOSP40205 109 aa1.71□□□□□ -2.14
CHD9-209ENST00000564255 OR2B8PP59922 312 aa1.71□□□□□ -2.14
CHD9-209ENST00000564255 RPS23P62266 143 aaKnown RBP1.71□□□□□ -2.14
CHD9-209ENST00000564255 TFDP2Q14188 446 aa1.71□□□□□ -2.14
CHD9-209ENST00000564255 MPPED2Q15777 294 aa1.71□□□□□ -2.14
CHD9-209ENST00000564255 VAMP3Q15836 100 aa1.71□□□□□ -2.14
CHD9-209ENST00000564255 PIGGQ5H8A4 983 aa1.71□□□□□ -2.14
CHD9-209ENST00000564255 HES5Q5TA89 166 aa1.71□□□□□ -2.14
CHD9-209ENST00000564255 MRPL55Q7Z7F7 128 aaKnown RBP1.71□□□□□ -2.14
CHD9-209ENST00000564255 ST13P4Q8IZP2 240 aaPredicted RBP1.71□□□□□ -2.14
CHD9-209ENST00000564255 ZFP90Q8TF47 636 aa1.71□□□□□ -2.14
CHD9-209ENST00000564255 ABHD3Q8WU67 409 aa1.71□□□□□ -2.14
CHD9-209ENST00000564255 OR8D1Q8WZ84 308 aa1.71□□□□□ -2.14
CHD9-209ENST00000564255 IL22RA2Q969J5 263 aa1.71□□□□□ -2.14
CHD9-209ENST00000564255 SAV1Q9H4B6 383 aaPredicted RBP1.71□□□□□ -2.14
CHD9-209ENST00000564255 ARMC7Q9H6L4 198 aa1.71□□□□□ -2.14
CHD9-209ENST00000564255 AGPAT3Q9NRZ7 376 aa1.71□□□□□ -2.14
CHD9-209ENST00000564255 AGRNO00468 2067 aa1.71□□□□□ -2.14
CHD9-209ENST00000564255 MAP3K15Q6ZN16 1313 aa1.71□□□□□ -2.14
CHD9-209ENST00000564255 PCDH11XQ9BZA7 1347 aa1.71□□□□□ -2.14
CHD9-209ENST00000564255 KIAA0586Q9BVV6 1533 aa1.71□□□□□ -2.14
CHD9-209ENST00000564255 A0A1B0GVX0 72 aa1.71□□□□□ -2.14
CHD9-209ENST00000564255 CIB4A0PJX0 185 aa1.71□□□□□ -2.14
CHD9-209ENST00000564255 PDZK1P1A8MUH7 402 aa1.71□□□□□ -2.14
CHD9-209ENST00000564255 KLLNB2CW77 178 aa1.71□□□□□ -2.14
CHD9-209ENST00000564255 NVLO15381 856 aaKnown RBP1.71□□□□□ -2.14
CHD9-209ENST00000564255 YKT6O15498 198 aa1.71□□□□□ -2.14
CHD9-209ENST00000564255 NMT2O60551 498 aa1.71□□□□□ -2.14
CHD9-209ENST00000564255 APOA1P02647 267 aa1.71□□□□□ -2.14
CHD9-209ENST00000564255 GLAP06280 429 aa1.71□□□□□ -2.14
CHD9-209ENST00000564255 CCL2P13500 99 aa1.71□□□□□ -2.14
CHD9-209ENST00000564255 IGFBP3P17936 291 aaPredicted RBP1.71□□□□□ -2.14
CHD9-209ENST00000564255 LOXP28300 417 aaPredicted RBP1.71□□□□□ -2.14
CHD9-209ENST00000564255 PPICP45877 212 aa1.71□□□□□ -2.14
CHD9-209ENST00000564255 P2RX1P51575 399 aa1.71□□□□□ -2.14
CHD9-209ENST00000564255 CTAG1AP78358 180 aa1.71□□□□□ -2.14
CHD9-209ENST00000564255 ART3Q13508 389 aa1.71□□□□□ -2.14
CHD9-209ENST00000564255 DGCR6Q14129 220 aa1.71□□□□□ -2.14
CHD9-209ENST00000564255 C18orf21Q32NC0 220 aaPredicted RBP1.71□□□□□ -2.14
CHD9-209ENST00000564255 KRT71Q3SY84 523 aa1.71□□□□□ -2.14
CHD9-209ENST00000564255 APOBEC3HQ6NTF7 200 aaKnown RBP1.71□□□□□ -2.14
CHD9-209ENST00000564255 DNAJC24Q6P3W2 148 aa1.71□□□□□ -2.14
CHD9-209ENST00000564255 DAW1Q8N136 415 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms