RNA–Protein interactions for RNA: ENST00000564111.5

SNX29-203, Transcript of sorting nexin 29, humanhuman

TSL 2

Gene SNX29, Length 2,248 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-203ENST00000564111 MRPL22Q9NWU5 206 aaKnown RBP12.54□□□□□ -0.4
SNX29-203ENST00000564111 COMMD3-BMI1R4GMX3 469 aa12.54□□□□□ -0.4
SNX29-203ENST00000564111 RTTNQ86VV8 2226 aa12.54□□□□□ -0.4
SNX29-203ENST00000564111 XRCC2O43543 280 aa12.54□□□□□ -0.4
SNX29-203ENST00000564111 E2F6O75461 281 aa12.54□□□□□ -0.4
SNX29-203ENST00000564111 LCATP04180 440 aa12.54□□□□□ -0.4
SNX29-203ENST00000564111 IRF2P14316 349 aa12.54□□□□□ -0.4
SNX29-203ENST00000564111 MDH2P40926 338 aaKnown RBP12.54□□□□□ -0.4
SNX29-203ENST00000564111 TMEM255AQ5JRV8 349 aa12.54□□□□□ -0.4
SNX29-203ENST00000564111 CORO6Q6QEF8 472 aa12.54□□□□□ -0.4
SNX29-203ENST00000564111 C1QL2Q7Z5L3 287 aa12.54□□□□□ -0.4
SNX29-203ENST00000564111 LINC00346Q8IVM7 164 aa12.54□□□□□ -0.4
SNX29-203ENST00000564111 ZFAND2BQ8WV99 257 aa12.54□□□□□ -0.4
SNX29-203ENST00000564111 ITLN1Q8WWA0 313 aa12.54□□□□□ -0.4
SNX29-203ENST00000564111 JMJD8Q96S16 334 aa12.54□□□□□ -0.4
SNX29-203ENST00000564111 PLA2G12AQ9BZM1 189 aa12.54□□□□□ -0.4
SNX29-203ENST00000564111 PNRC2Q9NPJ4 139 aaKnown RBP12.54□□□□□ -0.4
SNX29-203ENST00000564111 ARMC1Q9NVT9 282 aa12.54□□□□□ -0.4
SNX29-203ENST00000564111 DNAJB9Q9UBS3 223 aa12.54□□□□□ -0.4
SNX29-203ENST00000564111 LRCH1Q9Y2L9 728 aa12.54□□□□□ -0.4
SNX29-203ENST00000564111 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.53□□□□□ -0.4
SNX29-203ENST00000564111 F5H5K5 113 aa12.53□□□□□ -0.4
SNX29-203ENST00000564111 DBHP09172 617 aa12.53□□□□□ -0.4
SNX29-203ENST00000564111 SPI1P17947 270 aa12.53□□□□□ -0.4
SNX29-203ENST00000564111 OTX1P32242 354 aaPredicted RBP12.53□□□□□ -0.4
SNX29-203ENST00000564111 PYCR1P32322 319 aa12.53□□□□□ -0.4
SNX29-203ENST00000564111 BTG1P62324 171 aa12.53□□□□□ -0.4
SNX29-203ENST00000564111 CRMP1Q14194 572 aa12.53□□□□□ -0.4
SNX29-203ENST00000564111 PGAP1Q75T13 922 aa12.53□□□□□ -0.4
SNX29-203ENST00000564111 SPRYD4Q8WW59 207 aaPredicted RBP12.53□□□□□ -0.4
SNX29-203ENST00000564111 SLC7A6Q92536 515 aa12.53□□□□□ -0.4
SNX29-203ENST00000564111 MEGF10Q96KG7 1140 aa12.53□□□□□ -0.4
SNX29-203ENST00000564111 OR2V2Q96R30 315 aa12.53□□□□□ -0.4
SNX29-203ENST00000564111 KCNJ15Q99712 375 aa12.53□□□□□ -0.4
SNX29-203ENST00000564111 COPS4Q9BT78 406 aa12.53□□□□□ -0.4
SNX29-203ENST00000564111 MMADHCQ9H3L0 296 aaPredicted RBP12.53□□□□□ -0.4
SNX29-203ENST00000564111 POLR3KQ9Y2Y1 108 aaPredicted RBP12.53□□□□□ -0.4
SNX29-203ENST00000564111 DYSFO75923 2080 aa12.53□□□□□ -0.4
SNX29-203ENST00000564111 H3BN98 237 aa12.53□□□□□ -0.4
SNX29-203ENST00000564111 SPARCP09486 303 aa12.53□□□□□ -0.4
SNX29-203ENST00000564111 DDOSTP39656 456 aa12.53□□□□□ -0.4
SNX29-203ENST00000564111 GATA4P43694 442 aa12.53□□□□□ -0.4
SNX29-203ENST00000564111 KCNJ8Q15842 424 aa12.53□□□□□ -0.4
SNX29-203ENST00000564111 Q6ZR03 302 aa12.53□□□□□ -0.4
SNX29-203ENST00000564111 SPATA24Q86W54 205 aa12.53□□□□□ -0.4
SNX29-203ENST00000564111 ZNF454Q8N9F8 522 aa12.53□□□□□ -0.4
SNX29-203ENST00000564111 PLPP7Q8NBV4 271 aa12.53□□□□□ -0.4
SNX29-203ENST00000564111 PAPD5Q8NDF8 572 aaKnown RBP12.53□□□□□ -0.4
SNX29-203ENST00000564111 OR4Q3Q8NH05 313 aa12.53□□□□□ -0.4
SNX29-203ENST00000564111 ABCB9Q9NP78 766 aa12.53□□□□□ -0.4
SNX29-203ENST00000564111 G6PC2Q9NQR9 355 aa12.53□□□□□ -0.4
SNX29-203ENST00000564111 VNN3Q9NY84 501 aa12.53□□□□□ -0.4
SNX29-203ENST00000564111 U3KQV3 271 aa12.53□□□□□ -0.4
SNX29-203ENST00000564111 ANK3Q12955 4377 aaKnown RBP12.52□□□□□ -0.4
SNX29-203ENST00000564111 ZFHX3Q15911 3703 aa12.52□□□□□ -0.4
SNX29-203ENST00000564111 A8MXK9 166 aa12.52□□□□□ -0.41
SNX29-203ENST00000564111 GMDSO60547 372 aa12.52□□□□□ -0.41
SNX29-203ENST00000564111 GPANK1O95872 356 aa12.52□□□□□ -0.41
SNX29-203ENST00000564111 CD200P41217 278 aa12.52□□□□□ -0.41
SNX29-203ENST00000564111 SLC6A9P48067 706 aa12.52□□□□□ -0.41
SNX29-203ENST00000564111 SLC35D3Q5M8T2 416 aa12.52□□□□□ -0.41
SNX29-203ENST00000564111 DCAF12L2Q5VW00 463 aa12.52□□□□□ -0.41
SNX29-203ENST00000564111 OR2T2Q6IF00 324 aa12.52□□□□□ -0.41
SNX29-203ENST00000564111 LRRC28Q86X40 367 aaPredicted RBP12.52□□□□□ -0.41
SNX29-203ENST00000564111 CYB561A3Q8NBI2 242 aa12.52□□□□□ -0.41
SNX29-203ENST00000564111 PLEKHA8Q96JA3 519 aa12.52□□□□□ -0.41
SNX29-203ENST00000564111 INTS14Q96SY0 518 aa12.52□□□□□ -0.41
SNX29-203ENST00000564111 FEVQ99581 238 aa12.52□□□□□ -0.41
SNX29-203ENST00000564111 MARCH7Q9H992 704 aa12.52□□□□□ -0.41
SNX29-203ENST00000564111 PATZ1Q9HBE1 687 aaKnown RBP12.52□□□□□ -0.41
SNX29-203ENST00000564111 PDP1Q9P0J1 537 aaPredicted RBP12.52□□□□□ -0.41
SNX29-203ENST00000564111 ENOPH1Q9UHY7 261 aa12.52□□□□□ -0.41
SNX29-203ENST00000564111 TCRBV3S1A0A5B6 114 aa12.52□□□□□ -0.41
SNX29-203ENST00000564111 PRODHO43272 600 aa12.52□□□□□ -0.41
SNX29-203ENST00000564111 PLPP2O43688 288 aa12.52□□□□□ -0.41
SNX29-203ENST00000564111 GLCEO94923 617 aa12.52□□□□□ -0.41
SNX29-203ENST00000564111 OSMP13725 252 aa12.52□□□□□ -0.41
SNX29-203ENST00000564111 MMP16P51512 607 aa12.52□□□□□ -0.41
SNX29-203ENST00000564111 CBX1P83916 185 aa12.52□□□□□ -0.41
SNX29-203ENST00000564111 DCXRQ7Z4W1 244 aa12.52□□□□□ -0.41
SNX29-203ENST00000564111 Q8TCH9 128 aa12.52□□□□□ -0.41
SNX29-203ENST00000564111 ZNF418Q8TF45 676 aaPredicted RBP12.52□□□□□ -0.41
SNX29-203ENST00000564111 CANT1Q8WVQ1 401 aa12.52□□□□□ -0.41
SNX29-203ENST00000564111 SLAMF6Q96DU3 332 aa12.52□□□□□ -0.41
SNX29-203ENST00000564111 MAP6Q96JE9 813 aa12.52□□□□□ -0.41
SNX29-203ENST00000564111 MDFIQ99750 246 aa12.52□□□□□ -0.41
SNX29-203ENST00000564111 MRPL15Q9P015 296 aaKnown RBP12.52□□□□□ -0.41
SNX29-203ENST00000564111 PRR23D1E9PI22 279 aaPredicted RBP12.51□□□□□ -0.41
SNX29-203ENST00000564111 F5H0A9 414 aaPredicted RBP12.51□□□□□ -0.41
SNX29-203ENST00000564111 TMEM178BH3BS89 294 aa12.51□□□□□ -0.41
SNX29-203ENST00000564111 FKBP6O75344 327 aa12.51□□□□□ -0.41
SNX29-203ENST00000564111 SOX14O95416 240 aa12.51□□□□□ -0.41
SNX29-203ENST00000564111 PRR23D2P0DMB1 279 aaPredicted RBP12.51□□□□□ -0.41
SNX29-203ENST00000564111 GSTT1P30711 240 aa12.51□□□□□ -0.41
SNX29-203ENST00000564111 ZNF362Q5T0B9 420 aaPredicted RBP12.51□□□□□ -0.41
SNX29-203ENST00000564111 IL17RELQ6ZVW7 336 aa12.51□□□□□ -0.41
SNX29-203ENST00000564111 OR5AS1Q8N127 324 aa12.51□□□□□ -0.41
SNX29-203ENST00000564111 OR6K6Q8NGW6 343 aa12.51□□□□□ -0.41
SNX29-203ENST00000564111 RGCCQ9H4X1 137 aa12.51□□□□□ -0.41
SNX29-203ENST00000564111 SLC25A19Q9HC21 320 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms