RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 A0A1B0GVI7 797 aa11.14□□□□□ -0.63
CLK3-214ENST00000564096 LOC107986453A0A1B0GWG9 222 aa11.14□□□□□ -0.63
CLK3-214ENST00000564096 DPPA5A6NC42 116 aa11.14□□□□□ -0.63
CLK3-214ENST00000564096 OR4C45A6NMZ5 311 aa11.14□□□□□ -0.63
CLK3-214ENST00000564096 TBX1O43435 398 aa11.14□□□□□ -0.63
CLK3-214ENST00000564096 XRCC2O43543 280 aa11.14□□□□□ -0.63
CLK3-214ENST00000564096 AIREO43918 545 aa11.14□□□□□ -0.63
CLK3-214ENST00000564096 ZFPL1O95159 310 aa11.14□□□□□ -0.63
CLK3-214ENST00000564096 CLDN14O95500 239 aa11.14□□□□□ -0.63
CLK3-214ENST00000564096 LCATP04180 440 aa11.14□□□□□ -0.63
CLK3-214ENST00000564096 DBHP09172 617 aa11.14□□□□□ -0.63
CLK3-214ENST00000564096 ACSM4P0C7M7 580 aa11.14□□□□□ -0.63
CLK3-214ENST00000564096 SLC2A1P11166 492 aa11.14□□□□□ -0.63
CLK3-214ENST00000564096 ZNF12P17014 697 aa11.14□□□□□ -0.63
CLK3-214ENST00000564096 ZNF14P17017 642 aaPredicted RBP11.14□□□□□ -0.63
CLK3-214ENST00000564096 CFL1P23528 166 aaKnown RBP11.14□□□□□ -0.63
CLK3-214ENST00000564096 TMBIM6P55061 237 aa11.14□□□□□ -0.63
CLK3-214ENST00000564096 RPS25P62851 125 aaKnown RBP11.14□□□□□ -0.63
CLK3-214ENST00000564096 DOC2BQ14184 412 aa11.14□□□□□ -0.63
CLK3-214ENST00000564096 TAB1Q15750 504 aa11.14□□□□□ -0.63
CLK3-214ENST00000564096 GDPGP1Q6ZNW5 385 aa11.14□□□□□ -0.63
CLK3-214ENST00000564096 ANKRD13BQ86YJ7 626 aa11.14□□□□□ -0.63
CLK3-214ENST00000564096 ZNF584Q8IVC4 421 aa11.14□□□□□ -0.63
CLK3-214ENST00000564096 ELMOD2Q8IZ81 293 aa11.14□□□□□ -0.63
CLK3-214ENST00000564096 PRSS35Q8N3Z0 413 aa11.14□□□□□ -0.63
CLK3-214ENST00000564096 CPEB3Q8NE35 698 aaKnown RBP11.14□□□□□ -0.63
CLK3-214ENST00000564096 IL17RDQ8NFM7 739 aa11.14□□□□□ -0.63
CLK3-214ENST00000564096 OR8B12Q8NGG6 310 aa11.14□□□□□ -0.63
CLK3-214ENST00000564096 GPR148Q8TDV2 347 aa11.14□□□□□ -0.63
CLK3-214ENST00000564096 TSEN15Q8WW01 171 aaKnown RBP11.14□□□□□ -0.63
CLK3-214ENST00000564096 SLC7A6Q92536 515 aa11.14□□□□□ -0.63
CLK3-214ENST00000564096 APOBEC3DQ96AK3 386 aaPredicted RBP11.14□□□□□ -0.63
CLK3-214ENST00000564096 POM121L2Q96KW2 1035 aa11.14□□□□□ -0.63
CLK3-214ENST00000564096 PDCD1LG2Q9BQ51 273 aa11.14□□□□□ -0.63
CLK3-214ENST00000564096 OPA3Q9H6K4 179 aa11.14□□□□□ -0.63
CLK3-214ENST00000564096 G6PC2Q9NQR9 355 aa11.14□□□□□ -0.63
CLK3-214ENST00000564096 FRRS1LQ9P0K9 344 aa11.14□□□□□ -0.63
CLK3-214ENST00000564096 RSL24D1Q9UHA3 163 aaKnown RBP11.14□□□□□ -0.63
CLK3-214ENST00000564096 HHLA2Q9UM44 414 aa11.14□□□□□ -0.63
CLK3-214ENST00000564096 N6AMT1Q9Y5N5 214 aa11.14□□□□□ -0.63
CLK3-214ENST00000564096 A0A0U1RQV5 110 aa11.13□□□□□ -0.63
CLK3-214ENST00000564096 LOC100506127A0A0U1RQW1 187 aa11.13□□□□□ -0.63
CLK3-214ENST00000564096 NKX2-6A6NCS4 301 aa11.13□□□□□ -0.63
CLK3-214ENST00000564096 ZNF701M0R085 212 aaPredicted RBP11.13□□□□□ -0.63
CLK3-214ENST00000564096 ZG16O60844 167 aa11.13□□□□□ -0.63
CLK3-214ENST00000564096 GATBO75879 557 aaKnown RBP11.13□□□□□ -0.63
CLK3-214ENST00000564096 PNPP00491 289 aa11.13□□□□□ -0.63
CLK3-214ENST00000564096 IGLV1-44P01699 117 aa11.13□□□□□ -0.63
CLK3-214ENST00000564096 ISG15P05161 165 aa11.13□□□□□ -0.63
CLK3-214ENST00000564096 CD2P06729 351 aa11.13□□□□□ -0.63
CLK3-214ENST00000564096 GADD45AP24522 165 aa11.13□□□□□ -0.63
CLK3-214ENST00000564096 KIR3DL2P43630 455 aa11.13□□□□□ -0.63
CLK3-214ENST00000564096 MALLQ13021 153 aa11.13□□□□□ -0.63
CLK3-214ENST00000564096 GFOD2Q3B7J2 385 aa11.13□□□□□ -0.63
CLK3-214ENST00000564096 DOK3Q7L591 496 aa11.13□□□□□ -0.63
CLK3-214ENST00000564096 KBTBD8Q8NFY9 601 aa11.13□□□□□ -0.63
CLK3-214ENST00000564096 OR5L1Q8NGL2 311 aa11.13□□□□□ -0.63
CLK3-214ENST00000564096 AKAP1Q92667 903 aaKnown RBP eCLIP11.13□□□□□ -0.63
CLK3-214ENST00000564096 TMEM203Q969S6 136 aa11.13□□□□□ -0.63
CLK3-214ENST00000564096 CHCHD6Q9BRQ6 235 aa11.13□□□□□ -0.63
CLK3-214ENST00000564096 C1QTNF5Q9BXJ0 243 aa11.13□□□□□ -0.63
CLK3-214ENST00000564096 PLEKHA1Q9HB21 404 aa11.13□□□□□ -0.63
CLK3-214ENST00000564096 SLC24A3Q9HC58 644 aa11.13□□□□□ -0.63
CLK3-214ENST00000564096 NDRG3Q9UGV2 375 aa11.13□□□□□ -0.63
CLK3-214ENST00000564096 DHDHQ9UQ10 334 aa11.13□□□□□ -0.63
CLK3-214ENST00000564096 SLC22A13Q9Y226 551 aa11.13□□□□□ -0.63
CLK3-214ENST00000564096 GSTK1Q9Y2Q3 226 aa11.13□□□□□ -0.63
CLK3-214ENST00000564096 SIRT4Q9Y6E7 314 aaPredicted RBP11.13□□□□□ -0.63
CLK3-214ENST00000564096 RP1L1Q8IWN7 2480 aaPredicted RBP11.13□□□□□ -0.63
CLK3-214ENST00000564096 IGSF10Q6WRI0 2623 aa11.12□□□□□ -0.63
CLK3-214ENST00000564096 PRRC2CQ9Y520 2896 aaKnown RBP11.12□□□□□ -0.63
CLK3-214ENST00000564096 INTS1Q8N201 2190 aaKnown RBP11.12□□□□□ -0.63
CLK3-214ENST00000564096 LOC100509620A0A075B734 347 aa11.12□□□□□ -0.63
CLK3-214ENST00000564096 TRDV1A0A1B0GX56 115 aa11.12□□□□□ -0.63
CLK3-214ENST00000564096 ZNF879B4DU55 563 aa11.12□□□□□ -0.63
CLK3-214ENST00000564096 M0R1B8 84 aa11.12□□□□□ -0.63
CLK3-214ENST00000564096 SLC22A1O15245 554 aa11.12□□□□□ -0.63
CLK3-214ENST00000564096 SYT7O43581 403 aa11.12□□□□□ -0.63
CLK3-214ENST00000564096 MTRF1O75570 445 aaKnown RBP11.12□□□□□ -0.63
CLK3-214ENST00000564096 ARL6IP5O75915 188 aa11.12□□□□□ -0.63
CLK3-214ENST00000564096 AGFG2O95081 481 aa11.12□□□□□ -0.63
CLK3-214ENST00000564096 CRYAAP02489 173 aa11.12□□□□□ -0.63
CLK3-214ENST00000564096 TTRP02766 147 aa11.12□□□□□ -0.63
CLK3-214ENST00000564096 CECR9P0C854 216 aa11.12□□□□□ -0.63
CLK3-214ENST00000564096 OCM2P0CE71 109 aa11.12□□□□□ -0.63
CLK3-214ENST00000564096 ZNF83P51522 516 aa11.12□□□□□ -0.63
CLK3-214ENST00000564096 ODF4Q2M2E3 257 aa11.12□□□□□ -0.63
CLK3-214ENST00000564096 Q499Y3 187 aa11.12□□□□□ -0.63
CLK3-214ENST00000564096 ALKBH2Q6NS38 261 aa11.12□□□□□ -0.63
CLK3-214ENST00000564096 TMEM108Q6UXF1 575 aa11.12□□□□□ -0.63
CLK3-214ENST00000564096 WFDC8Q8IUA0 241 aa11.12□□□□□ -0.63
CLK3-214ENST00000564096 C1orf174Q8IYL3 243 aa11.12□□□□□ -0.63
CLK3-214ENST00000564096 ITLN2Q8WWU7 325 aaPredicted RBP11.12□□□□□ -0.63
CLK3-214ENST00000564096 PHYHIPQ92561 330 aa11.12□□□□□ -0.63
CLK3-214ENST00000564096 RNF166Q96A37 237 aaPredicted RBP11.12□□□□□ -0.63
CLK3-214ENST00000564096 ISOC1Q96CN7 298 aa11.12□□□□□ -0.63
CLK3-214ENST00000564096 ZNF75AQ96N20 296 aa11.12□□□□□ -0.63
CLK3-214ENST00000564096 RBM38Q9H0Z9 239 aaKnown RBP11.12□□□□□ -0.63
CLK3-214ENST00000564096 CKLFQ9UBR5 152 aa11.12□□□□□ -0.63
CLK3-214ENST00000564096 SPEF1Q9Y4P9 236 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms