RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 TEX36Q5VZQ5 186 aa6.24□□□□□ -1.41
HERPUD1-206ENST00000563343 REEP3Q6NUK4 255 aa6.24□□□□□ -1.41
HERPUD1-206ENST00000563343 C1orf94Q6P1W5 598 aa6.24□□□□□ -1.41
HERPUD1-206ENST00000563343 COLCA1Q6ZS62 124 aa6.24□□□□□ -1.41
HERPUD1-206ENST00000563343 HIST3H2AQ7L7L0 130 aa6.24□□□□□ -1.41
HERPUD1-206ENST00000563343 RBM45Q8IUH3 476 aaKnown RBP6.24□□□□□ -1.41
HERPUD1-206ENST00000563343 LINC00482Q8N8I6 264 aa6.24□□□□□ -1.41
HERPUD1-206ENST00000563343 DTX3Q8N9I9 347 aa6.24□□□□□ -1.41
HERPUD1-206ENST00000563343 GPR32P1Q8NGA4 272 aa6.24□□□□□ -1.41
HERPUD1-206ENST00000563343 OR6T1Q8NGN1 323 aa6.24□□□□□ -1.41
HERPUD1-206ENST00000563343 C8orf46Q8TAG6 207 aa6.24□□□□□ -1.41
HERPUD1-206ENST00000563343 LIPHQ8WWY8 451 aa6.24□□□□□ -1.41
HERPUD1-206ENST00000563343 ST8SIA4Q92187 359 aa6.24□□□□□ -1.41
HERPUD1-206ENST00000563343 HIST1H2ACQ93077 130 aa6.24□□□□□ -1.41
HERPUD1-206ENST00000563343 ALG12Q9BV10 488 aa6.24□□□□□ -1.41
HERPUD1-206ENST00000563343 SPATA5L1Q9BVQ7 753 aa6.24□□□□□ -1.41
HERPUD1-206ENST00000563343 TXNIPQ9H3M7 391 aa6.24□□□□□ -1.41
HERPUD1-206ENST00000563343 RAD21L1Q9H4I0 556 aa6.24□□□□□ -1.41
HERPUD1-206ENST00000563343 EVA1AQ9H8M9 152 aa6.24□□□□□ -1.41
HERPUD1-206ENST00000563343 RAB18Q9NP72 206 aa6.24□□□□□ -1.41
HERPUD1-206ENST00000563343 EMC7Q9NPA0 242 aa6.24□□□□□ -1.41
HERPUD1-206ENST00000563343 SLC25A37Q9NYZ2 338 aa6.24□□□□□ -1.41
HERPUD1-206ENST00000563343 STX18Q9P2W9 335 aaKnown RBP6.24□□□□□ -1.41
HERPUD1-206ENST00000563343 DNAJB11Q9UBS4 358 aa6.24□□□□□ -1.41
HERPUD1-206ENST00000563343 SLC7A7Q9UM01 511 aa6.24□□□□□ -1.41
HERPUD1-206ENST00000563343 RAP2CQ9Y3L5 183 aa6.24□□□□□ -1.41
HERPUD1-206ENST00000563343 A0A1W2PPL8 197 aa6.23□□□□□ -1.41
HERPUD1-206ENST00000563343 SMIM23A6NLE4 172 aa6.23□□□□□ -1.41
HERPUD1-206ENST00000563343 C5orf58C9J3I9 102 aa6.23□□□□□ -1.41
HERPUD1-206ENST00000563343 FBP2O00757 339 aa6.23□□□□□ -1.41
HERPUD1-206ENST00000563343 ANGPTL7O43827 346 aa6.23□□□□□ -1.41
HERPUD1-206ENST00000563343 SPAG7O75391 227 aa6.23□□□□□ -1.41
HERPUD1-206ENST00000563343 OR7A10O76100 309 aa6.23□□□□□ -1.41
HERPUD1-206ENST00000563343 ANP32DO95626 131 aa6.23□□□□□ -1.41
HERPUD1-206ENST00000563343 MT-ND1P03886 318 aa6.23□□□□□ -1.41
HERPUD1-206ENST00000563343 PF4V1P10720 104 aa6.23□□□□□ -1.41
HERPUD1-206ENST00000563343 NR2C1P13056 603 aa6.23□□□□□ -1.41
HERPUD1-206ENST00000563343 FUT1P19526 365 aa6.23□□□□□ -1.41
HERPUD1-206ENST00000563343 AMY2BP19961 511 aa6.23□□□□□ -1.41
HERPUD1-206ENST00000563343 RPL14P50914 215 aaKnown RBP6.23□□□□□ -1.41
HERPUD1-206ENST00000563343 BMXP51813 675 aa6.23□□□□□ -1.41
HERPUD1-206ENST00000563343 CDK6Q00534 326 aa6.23□□□□□ -1.41
HERPUD1-206ENST00000563343 SCRN3Q0VDG4 424 aa6.23□□□□□ -1.41
HERPUD1-206ENST00000563343 OR8B8Q15620 311 aa6.23□□□□□ -1.41
HERPUD1-206ENST00000563343 DUSP7Q16829 419 aa6.23□□□□□ -1.41
HERPUD1-206ENST00000563343 RSPO1Q2MKA7 263 aaPredicted RBP6.23□□□□□ -1.41
HERPUD1-206ENST00000563343 BEND6Q5SZJ8 279 aaPredicted RBP6.23□□□□□ -1.41
HERPUD1-206ENST00000563343 MSANTD1Q6ZTZ1 278 aa6.23□□□□□ -1.41
HERPUD1-206ENST00000563343 KRT73Q86Y46 540 aa6.23□□□□□ -1.41
HERPUD1-206ENST00000563343 MSRB3Q8IXL7 192 aa6.23□□□□□ -1.41
HERPUD1-206ENST00000563343 BOLLQ8N9W6 283 aaKnown RBP6.23□□□□□ -1.41
HERPUD1-206ENST00000563343 SMYD1Q8NB12 490 aa6.23□□□□□ -1.41
HERPUD1-206ENST00000563343 OR51G2Q8NGK0 314 aa6.23□□□□□ -1.41
HERPUD1-206ENST00000563343 FNDC8Q8TC99 324 aa6.23□□□□□ -1.41
HERPUD1-206ENST00000563343 GTF2H4Q92759 462 aa6.23□□□□□ -1.41
HERPUD1-206ENST00000563343 ITCHQ96J02 903 aa6.23□□□□□ -1.41
HERPUD1-206ENST00000563343 MPP4Q96JB8 637 aa6.23□□□□□ -1.41
HERPUD1-206ENST00000563343 ZNF583Q96ND8 569 aa6.23□□□□□ -1.41
HERPUD1-206ENST00000563343 NKX3-1Q99801 234 aaPredicted RBP6.23□□□□□ -1.41
HERPUD1-206ENST00000563343 DCTN5Q9BTE1 182 aa6.23□□□□□ -1.41
HERPUD1-206ENST00000563343 CDCA4Q9BXL8 241 aa6.23□□□□□ -1.41
HERPUD1-206ENST00000563343 FAM234AQ9H0X4 552 aa6.23□□□□□ -1.41
HERPUD1-206ENST00000563343 WDR76Q9H967 626 aa6.23□□□□□ -1.41
HERPUD1-206ENST00000563343 TRIM36Q9NQ86 728 aa6.23□□□□□ -1.41
HERPUD1-206ENST00000563343 ATPIF1Q9UII2 106 aa6.23□□□□□ -1.41
HERPUD1-206ENST00000563343 PRPF19Q9UMS4 504 aaKnown RBP6.23□□□□□ -1.41
HERPUD1-206ENST00000563343 ANGPT4Q9Y264 503 aa6.23□□□□□ -1.41
HERPUD1-206ENST00000563343 FRAS1Q86XX4 4008 aa6.23□□□□□ -1.41
HERPUD1-206ENST00000563343 PCLOQ9Y6V0 5065 aa6.23□□□□□ -1.41
HERPUD1-206ENST00000563343 DSCAML1Q8TD84 2053 aa6.22□□□□□ -1.41
HERPUD1-206ENST00000563343 IGHV3OR15-7A0A075B7D8 119 aa6.22□□□□□ -1.41
HERPUD1-206ENST00000563343 TRAPPC13A5PLN9 417 aa6.22□□□□□ -1.41
HERPUD1-206ENST00000563343 PRORSD1PA6NEY8 169 aa6.22□□□□□ -1.41
HERPUD1-206ENST00000563343 NKX6-3A6NJ46 265 aa6.22□□□□□ -1.41
HERPUD1-206ENST00000563343 H0YHG0 523 aa6.22□□□□□ -1.41
HERPUD1-206ENST00000563343 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.22□□□□□ -1.41
HERPUD1-206ENST00000563343 IGF2P01344 180 aa6.22□□□□□ -1.41
HERPUD1-206ENST00000563343 PF4P02776 101 aa6.22□□□□□ -1.41
HERPUD1-206ENST00000563343 SERPINE1P05121 402 aa6.22□□□□□ -1.41
HERPUD1-206ENST00000563343 CHRM2P08172 466 aa6.22□□□□□ -1.41
HERPUD1-206ENST00000563343 LMO1P25800 156 aa6.22□□□□□ -1.41
HERPUD1-206ENST00000563343 ABCE1P61221 599 aaKnown RBP6.22□□□□□ -1.41
HERPUD1-206ENST00000563343 RPL27P61353 136 aaKnown RBP6.22□□□□□ -1.41
HERPUD1-206ENST00000563343 FHL1Q13642 323 aa6.22□□□□□ -1.41
HERPUD1-206ENST00000563343 TMEM95Q3KNT9 176 aa6.22□□□□□ -1.41
HERPUD1-206ENST00000563343 GCNT6Q5T4J0 391 aa6.22□□□□□ -1.41
HERPUD1-206ENST00000563343 INTS11Q5TA45 600 aaKnown RBP6.22□□□□□ -1.41
HERPUD1-206ENST00000563343 OTPQ5XKR4 325 aa6.22□□□□□ -1.41
HERPUD1-206ENST00000563343 ETV3LQ6ZN32 361 aa6.22□□□□□ -1.41
HERPUD1-206ENST00000563343 ZNF826PQ6ZT77 177 aa6.22□□□□□ -1.41
HERPUD1-206ENST00000563343 CMTM4Q8IZR5 234 aa6.22□□□□□ -1.41
HERPUD1-206ENST00000563343 LRRC75AQ8NAA5 344 aa6.22□□□□□ -1.41
HERPUD1-206ENST00000563343 OR5L1Q8NGL2 311 aa6.22□□□□□ -1.41
HERPUD1-206ENST00000563343 OR9I1Q8NGQ6 314 aa6.22□□□□□ -1.41
HERPUD1-206ENST00000563343 OR1F12Q8NHA8 337 aa6.22□□□□□ -1.41
HERPUD1-206ENST00000563343 PFN4Q8NHR9 129 aa6.22□□□□□ -1.41
HERPUD1-206ENST00000563343 AENQ8WTP8 325 aaKnown RBP6.22□□□□□ -1.41
HERPUD1-206ENST00000563343 APOBEC3DQ96AK3 386 aaPredicted RBP6.22□□□□□ -1.41
HERPUD1-206ENST00000563343 RBP7Q96R05 134 aa6.22□□□□□ -1.41
HERPUD1-206ENST00000563343 OR5M11Q96RB7 305 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms