RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 RHNO1Q9BSD3 238 aa7.27□□□□□ -1.25
UBR1-204ENST00000563239 TEX12Q9BXU0 123 aa7.27□□□□□ -1.25
UBR1-204ENST00000563239 TOR3AQ9H497 397 aa7.27□□□□□ -1.25
UBR1-204ENST00000563239 MSL2Q9HCI7 577 aa7.27□□□□□ -1.25
UBR1-204ENST00000563239 CENPMQ9NSP4 180 aa7.27□□□□□ -1.25
UBR1-204ENST00000563239 NKIRAS2Q9NYR9 191 aa7.27□□□□□ -1.25
UBR1-204ENST00000563239 ZNF319Q9P2F9 582 aa7.27□□□□□ -1.25
UBR1-204ENST00000563239 ENOPH1Q9UHY7 261 aa7.27□□□□□ -1.25
UBR1-204ENST00000563239 COPS3Q9UNS2 423 aa7.27□□□□□ -1.25
UBR1-204ENST00000563239 CHD3Q12873 2000 aaKnown RBP7.27□□□□□ -1.25
UBR1-204ENST00000563239 LOC390937A0A1W2PQ73 354 aa7.26□□□□□ -1.25
UBR1-204ENST00000563239 ZNF878C9JN71 531 aa7.26□□□□□ -1.25
UBR1-204ENST00000563239 SPRY3O43610 288 aa7.26□□□□□ -1.25
UBR1-204ENST00000563239 RP2O75695 350 aa7.26□□□□□ -1.25
UBR1-204ENST00000563239 BAG2O95816 211 aa7.26□□□□□ -1.25
UBR1-204ENST00000563239 LY6G6DO95868 133 aa7.26□□□□□ -1.25
UBR1-204ENST00000563239 LCATP04180 440 aa7.26□□□□□ -1.25
UBR1-204ENST00000563239 MRPL3P09001 348 aaKnown RBP7.26□□□□□ -1.25
UBR1-204ENST00000563239 CSF3P09919 207 aa7.26□□□□□ -1.25
UBR1-204ENST00000563239 SLC2A1P11166 492 aa7.26□□□□□ -1.25
UBR1-204ENST00000563239 ANPEPP15144 967 aa7.26□□□□□ -1.25
UBR1-204ENST00000563239 GABRB1P18505 474 aa7.26□□□□□ -1.25
UBR1-204ENST00000563239 RBMXP38159 391 aaKnown RBP7.26□□□□□ -1.25
UBR1-204ENST00000563239 NR4A2P43354 598 aa7.26□□□□□ -1.25
UBR1-204ENST00000563239 PDLIM4P50479 330 aa7.26□□□□□ -1.25
UBR1-204ENST00000563239 TPTEP56180 551 aa7.26□□□□□ -1.25
UBR1-204ENST00000563239 RPS7P62081 194 aaKnown RBP7.26□□□□□ -1.25
UBR1-204ENST00000563239 CCL8P80075 99 aa7.26□□□□□ -1.25
UBR1-204ENST00000563239 MRPS11P82912 194 aaKnown RBP7.26□□□□□ -1.25
UBR1-204ENST00000563239 GK2Q14410 553 aaPredicted RBP7.26□□□□□ -1.25
UBR1-204ENST00000563239 MOGQ16653 247 aa7.26□□□□□ -1.25
UBR1-204ENST00000563239 GLYATL3Q5SZD4 288 aa7.26□□□□□ -1.25
UBR1-204ENST00000563239 OR2T2Q6IF00 324 aa7.26□□□□□ -1.25
UBR1-204ENST00000563239 DRAM2Q6UX65 266 aa7.26□□□□□ -1.25
UBR1-204ENST00000563239 ZBTB49Q6ZSB9 765 aa7.26□□□□□ -1.25
UBR1-204ENST00000563239 RHOUQ7L0Q8 258 aa7.26□□□□□ -1.25
UBR1-204ENST00000563239 BIVMQ86UB2 503 aa7.26□□□□□ -1.25
UBR1-204ENST00000563239 RFLNBQ8N5W9 214 aa7.26□□□□□ -1.25
UBR1-204ENST00000563239 OR5L1Q8NGL2 311 aa7.26□□□□□ -1.25
UBR1-204ENST00000563239 THEM6Q8WUY1 208 aa7.26□□□□□ -1.25
UBR1-204ENST00000563239 EME1Q96AY2 570 aa7.26□□□□□ -1.25
UBR1-204ENST00000563239 COG8Q96MW5 612 aa7.26□□□□□ -1.25
UBR1-204ENST00000563239 ZNF582Q96NG8 517 aaPredicted RBP7.26□□□□□ -1.25
UBR1-204ENST00000563239 COPS4Q9BT78 406 aa7.26□□□□□ -1.25
UBR1-204ENST00000563239 C9orf16Q9BUW7 83 aa7.26□□□□□ -1.25
UBR1-204ENST00000563239 PRRG3Q9BZD7 231 aa7.26□□□□□ -1.25
UBR1-204ENST00000563239 YIPF3Q9GZM5 350 aa7.26□□□□□ -1.25
UBR1-204ENST00000563239 ADGRL4Q9HBW9 690 aa7.26□□□□□ -1.25
UBR1-204ENST00000563239 MYOZ1Q9NP98 299 aaPredicted RBP7.26□□□□□ -1.25
UBR1-204ENST00000563239 HAO2Q9NYQ3 351 aa7.26□□□□□ -1.25
UBR1-204ENST00000563239 GPR160Q9UJ42 338 aa7.26□□□□□ -1.25
UBR1-204ENST00000563239 CACNG2Q9Y698 323 aa7.26□□□□□ -1.25
UBR1-204ENST00000563239 CR1P17927 2039 aa7.26□□□□□ -1.25
UBR1-204ENST00000563239 TLN2Q9Y4G6 2542 aa7.25□□□□□ -1.25
UBR1-204ENST00000563239 IGHV4-61A0A0C4DH41 118 aa7.25□□□□□ -1.25
UBR1-204ENST00000563239 IQCF6A8MYZ5 107 aa7.25□□□□□ -1.25
UBR1-204ENST00000563239 H0YL77 283 aa7.25□□□□□ -1.25
UBR1-204ENST00000563239 NDUFS8O00217 210 aa7.25□□□□□ -1.25
UBR1-204ENST00000563239 TIMM8AO60220 97 aaPredicted RBP7.25□□□□□ -1.25
UBR1-204ENST00000563239 LYNP07948 512 aa7.25□□□□□ -1.25
UBR1-204ENST00000563239 ERCC1P07992 297 aaPredicted RBP7.25□□□□□ -1.25
UBR1-204ENST00000563239 CD55P08174 381 aa7.25□□□□□ -1.25
UBR1-204ENST00000563239 SLC25A16P16260 332 aa7.25□□□□□ -1.25
UBR1-204ENST00000563239 HTR1FP30939 366 aa7.25□□□□□ -1.25
UBR1-204ENST00000563239 LIPAP38571 399 aa7.25□□□□□ -1.25
UBR1-204ENST00000563239 CX3CR1P49238 355 aa7.25□□□□□ -1.25
UBR1-204ENST00000563239 RAD23AP54725 363 aa7.25□□□□□ -1.25
UBR1-204ENST00000563239 ZNF121P58317 390 aaPredicted RBP7.25□□□□□ -1.25
UBR1-204ENST00000563239 SNRPGP62308 76 aaKnown RBP7.25□□□□□ -1.25
UBR1-204ENST00000563239 GRB2P62993 217 aaKnown RBP7.25□□□□□ -1.25
UBR1-204ENST00000563239 ZNF92Q03936 586 aa7.25□□□□□ -1.25
UBR1-204ENST00000563239 LOXL1Q08397 574 aaPredicted RBP7.25□□□□□ -1.25
UBR1-204ENST00000563239 RCN1Q15293 331 aa7.25□□□□□ -1.25
UBR1-204ENST00000563239 TAF13Q15543 124 aa7.25□□□□□ -1.25
UBR1-204ENST00000563239 TSTQ16762 297 aaKnown RBP7.25□□□□□ -1.25
UBR1-204ENST00000563239 PCGF3Q3KNV8 242 aa7.25□□□□□ -1.25
UBR1-204ENST00000563239 SLC25A30Q5SVS4 291 aa7.25□□□□□ -1.25
UBR1-204ENST00000563239 LCN1P1Q5VSP4 162 aa7.25□□□□□ -1.25
UBR1-204ENST00000563239 LRRN1Q6UXK5 716 aa7.25□□□□□ -1.25
UBR1-204ENST00000563239 OR5AS1Q8N127 324 aa7.25□□□□□ -1.25
UBR1-204ENST00000563239 OR8J1Q8NGP2 316 aa7.25□□□□□ -1.25
UBR1-204ENST00000563239 OR2AE1Q8NHA4 323 aa7.25□□□□□ -1.25
UBR1-204ENST00000563239 FAM81AQ8TBF8 368 aa7.25□□□□□ -1.25
UBR1-204ENST00000563239 SNX33Q8WV41 574 aa7.25□□□□□ -1.25
UBR1-204ENST00000563239 RDH5Q92781 318 aa7.25□□□□□ -1.25
UBR1-204ENST00000563239 STMN2Q93045 179 aa7.25□□□□□ -1.25
UBR1-204ENST00000563239 SPSB4Q96A44 273 aa7.25□□□□□ -1.25
UBR1-204ENST00000563239 SGK3Q96BR1 496 aa7.25□□□□□ -1.25
UBR1-204ENST00000563239 POM121Q96HA1 1249 aa7.25□□□□□ -1.25
UBR1-204ENST00000563239 SLC30A2Q9BRI3 323 aa7.25□□□□□ -1.25
UBR1-204ENST00000563239 BPESC1Q9GZL8 116 aa7.25□□□□□ -1.25
UBR1-204ENST00000563239 CYSLTR2Q9NS75 346 aa7.25□□□□□ -1.25
UBR1-204ENST00000563239 FAM118AQ9NWS6 357 aa7.25□□□□□ -1.25
UBR1-204ENST00000563239 DNAJC27Q9NZQ0 273 aa7.25□□□□□ -1.25
UBR1-204ENST00000563239 AASSQ9UDR5 926 aa7.25□□□□□ -1.25
UBR1-204ENST00000563239 CGGBP1Q9UFW8 167 aaPredicted RBP7.25□□□□□ -1.25
UBR1-204ENST00000563239 CSPG4Q6UVK1 2322 aa7.24□□□□□ -1.25
UBR1-204ENST00000563239 PLSCR5A0PG75 271 aa7.24□□□□□ -1.25
UBR1-204ENST00000563239 SLC22A31A6NKX4 558 aa7.24□□□□□ -1.25
UBR1-204ENST00000563239 J3QRE1 110 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms