RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 BPESC1Q9GZL8 116 aa13.42□□□□□ -0.26
USB1-208ENST00000563207 PNRC2Q9NPJ4 139 aaKnown RBP13.42□□□□□ -0.26
USB1-208ENST00000563207 TBCCD1Q9NVR7 557 aa13.42□□□□□ -0.26
USB1-208ENST00000563207 CLN6Q9NWW5 311 aa13.42□□□□□ -0.26
USB1-208ENST00000563207 FBXO9Q9UK97 447 aaPredicted RBP13.42□□□□□ -0.26
USB1-208ENST00000563207 ZNF878C9JN71 531 aa13.41□□□□□ -0.26
USB1-208ENST00000563207 PHYHO14832 338 aa13.41□□□□□ -0.26
USB1-208ENST00000563207 PHF1O43189 567 aaPredicted RBP13.41□□□□□ -0.26
USB1-208ENST00000563207 APOC1P02654 83 aa13.41□□□□□ -0.26
USB1-208ENST00000563207 LYNP07948 512 aa13.41□□□□□ -0.26
USB1-208ENST00000563207 FAM157CP0CG43 387 aa13.41□□□□□ -0.26
USB1-208ENST00000563207 CCNOP22674 350 aa13.41□□□□□ -0.26
USB1-208ENST00000563207 HSPA13P48723 471 aa13.41□□□□□ -0.26
USB1-208ENST00000563207 GRB2P62993 217 aaKnown RBP13.41□□□□□ -0.26
USB1-208ENST00000563207 SNTB2Q13425 540 aaKnown RBP13.41□□□□□ -0.26
USB1-208ENST00000563207 EIF2B1Q14232 305 aaKnown RBP13.41□□□□□ -0.26
USB1-208ENST00000563207 KCTD18Q6PI47 426 aaPredicted RBP13.41□□□□□ -0.26
USB1-208ENST00000563207 BCDIN3DQ7Z5W3 292 aaKnown RBP13.41□□□□□ -0.26
USB1-208ENST00000563207 LRP11Q86VZ4 500 aa13.41□□□□□ -0.26
USB1-208ENST00000563207 RNF133Q8WVZ7 376 aa13.41□□□□□ -0.26
USB1-208ENST00000563207 SPTSSAQ969W0 71 aa13.41□□□□□ -0.26
USB1-208ENST00000563207 SLAMF6Q96DU3 332 aa13.41□□□□□ -0.26
USB1-208ENST00000563207 C4orf45Q96LM5 186 aa13.41□□□□□ -0.26
USB1-208ENST00000563207 PIMREGQ9BSJ6 248 aa13.41□□□□□ -0.26
USB1-208ENST00000563207 ABHD6Q9BV23 337 aa13.41□□□□□ -0.26
USB1-208ENST00000563207 BEX2Q9BXY8 128 aa13.41□□□□□ -0.26
USB1-208ENST00000563207 RASSF4Q9H2L5 321 aa13.41□□□□□ -0.26
USB1-208ENST00000563207 TPK1Q9H3S4 243 aa13.41□□□□□ -0.26
USB1-208ENST00000563207 DNAJC27Q9NZQ0 273 aa13.41□□□□□ -0.26
USB1-208ENST00000563207 LAMP5Q9UJQ1 280 aa13.41□□□□□ -0.26
USB1-208ENST00000563207 FZR1Q9UM11 496 aa13.41□□□□□ -0.26
USB1-208ENST00000563207 LOC100289279A0A1B0GTE1 492 aa13.4□□□□□ -0.26
USB1-208ENST00000563207 LOC390937A0A1W2PQ73 354 aa13.4□□□□□ -0.26
USB1-208ENST00000563207 H3BSA7 217 aa13.4□□□□□ -0.26
USB1-208ENST00000563207 SELENOFO60613 162 aa13.4□□□□□ -0.26
USB1-208ENST00000563207 LMX1BO60663 402 aa13.4□□□□□ -0.26
USB1-208ENST00000563207 ENTPD6O75354 484 aa13.4□□□□□ -0.26
USB1-208ENST00000563207 ABHD16AO95870 558 aa13.4□□□□□ -0.26
USB1-208ENST00000563207 ADRA2AP08913 450 aa13.4□□□□□ -0.26
USB1-208ENST00000563207 CSF3P09919 207 aa13.4□□□□□ -0.26
USB1-208ENST00000563207 SBK2P0C263 348 aa13.4□□□□□ -0.26
USB1-208ENST00000563207 CCL2P13500 99 aa13.4□□□□□ -0.26
USB1-208ENST00000563207 ALOX5APP20292 161 aa13.4□□□□□ -0.26
USB1-208ENST00000563207 OTX1P32242 354 aaPredicted RBP13.4□□□□□ -0.26
USB1-208ENST00000563207 ATP6V1E1P36543 226 aa13.4□□□□□ -0.26
USB1-208ENST00000563207 RPS27P42677 84 aaKnown RBP13.4□□□□□ -0.26
USB1-208ENST00000563207 MTNR1AP48039 350 aa13.4□□□□□ -0.26
USB1-208ENST00000563207 EVX1P49640 407 aa13.4□□□□□ -0.26
USB1-208ENST00000563207 PPOXP50336 477 aa13.4□□□□□ -0.26
USB1-208ENST00000563207 TPTEP56180 551 aa13.4□□□□□ -0.26
USB1-208ENST00000563207 KRTAP27-1Q3LI81 207 aa13.4□□□□□ -0.26
USB1-208ENST00000563207 TMEM154Q6P9G4 183 aa13.4□□□□□ -0.26
USB1-208ENST00000563207 DEGS2Q6QHC5 323 aa13.4□□□□□ -0.26
USB1-208ENST00000563207 PAQR4Q8N4S7 273 aaPredicted RBP13.4□□□□□ -0.26
USB1-208ENST00000563207 ASB17Q8WXJ9 295 aa13.4□□□□□ -0.26
USB1-208ENST00000563207 TFAP2CQ92754 450 aa13.4□□□□□ -0.26
USB1-208ENST00000563207 MRPL37Q9BZE1 423 aaKnown RBP13.4□□□□□ -0.26
USB1-208ENST00000563207 ADGRL4Q9HBW9 690 aa13.4□□□□□ -0.26
USB1-208ENST00000563207 MYEF2Q9P2K5 600 aaKnown RBP13.4□□□□□ -0.26
USB1-208ENST00000563207 CMAHPQ9Y471 501 aa13.4□□□□□ -0.26
USB1-208ENST00000563207 PCDHGB1Q9Y5G3 927 aa13.4□□□□□ -0.26
USB1-208ENST00000563207 OR2T7P0C7T2 308 aa13.39□□□□□ -0.27
USB1-208ENST00000563207 DAOP14920 347 aa13.39□□□□□ -0.27
USB1-208ENST00000563207 VHLP40337 213 aa13.39□□□□□ -0.27
USB1-208ENST00000563207 NAA10P41227 235 aaPredicted RBP13.39□□□□□ -0.27
USB1-208ENST00000563207 SELENOVP59797 346 aa13.39□□□□□ -0.27
USB1-208ENST00000563207 ISL1P61371 349 aa13.39□□□□□ -0.27
USB1-208ENST00000563207 IL5RAQ01344 420 aa13.39□□□□□ -0.27
USB1-208ENST00000563207 MAD2L1BPQ15013 274 aaPredicted RBP13.39□□□□□ -0.27
USB1-208ENST00000563207 TAF13Q15543 124 aa13.39□□□□□ -0.27
USB1-208ENST00000563207 DRAM2Q6UX65 266 aa13.39□□□□□ -0.27
USB1-208ENST00000563207 C8orf59Q8N0T1 100 aaPredicted RBP13.39□□□□□ -0.27
USB1-208ENST00000563207 OR5L1Q8NGL2 311 aa13.39□□□□□ -0.27
USB1-208ENST00000563207 OR10S1Q8NGN2 331 aa13.39□□□□□ -0.27
USB1-208ENST00000563207 OR2T27Q8NH04 317 aa13.39□□□□□ -0.27
USB1-208ENST00000563207 THEM6Q8WUY1 208 aa13.39□□□□□ -0.27
USB1-208ENST00000563207 KCNJ15Q99712 375 aa13.39□□□□□ -0.27
USB1-208ENST00000563207 COPS4Q9BT78 406 aa13.39□□□□□ -0.27
USB1-208ENST00000563207 REPIN1Q9BWE0 567 aaKnown RBP13.39□□□□□ -0.27
USB1-208ENST00000563207 NIPAL2Q9H841 368 aa13.39□□□□□ -0.27
USB1-208ENST00000563207 SP140LQ9H930 580 aa13.39□□□□□ -0.27
USB1-208ENST00000563207 CENPMQ9NSP4 180 aa13.39□□□□□ -0.27
USB1-208ENST00000563207 CDC42EP3Q9UKI2 254 aa13.39□□□□□ -0.27
USB1-208ENST00000563207 GRIP1Q9Y3R0 1128 aa13.39□□□□□ -0.27
USB1-208ENST00000563207 RPL36Q9Y3U8 105 aaKnown RBP13.39□□□□□ -0.27
USB1-208ENST00000563207 M0R135 149 aa13.38□□□□□ -0.27
USB1-208ENST00000563207 NDUFS8O00217 210 aa13.38□□□□□ -0.27
USB1-208ENST00000563207 LILRA1O75019 489 aa13.38□□□□□ -0.27
USB1-208ENST00000563207 IFNA2P01563 188 aa13.38□□□□□ -0.27
USB1-208ENST00000563207 MRPL3P09001 348 aaKnown RBP13.38□□□□□ -0.27
USB1-208ENST00000563207 ACSM4P0C7M7 580 aa13.38□□□□□ -0.27
USB1-208ENST00000563207 PSKH1P11801 424 aa13.38□□□□□ -0.27
USB1-208ENST00000563207 WNT5AP41221 380 aa13.38□□□□□ -0.27
USB1-208ENST00000563207 GZMKP49863 264 aa13.38□□□□□ -0.27
USB1-208ENST00000563207 AQP4P55087 323 aa13.38□□□□□ -0.27
USB1-208ENST00000563207 RSPO1Q2MKA7 263 aaPredicted RBP13.38□□□□□ -0.27
USB1-208ENST00000563207 KRTAP24-1Q3LI83 254 aa13.38□□□□□ -0.27
USB1-208ENST00000563207 FAM120AOSQ5T036 256 aa13.38□□□□□ -0.27
USB1-208ENST00000563207 RGS7BPQ6MZT1 257 aaPredicted RBP13.38□□□□□ -0.27
USB1-208ENST00000563207 USP51Q70EK9 711 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms