RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.38□□□□□ -1.07
CLK3-208ENST00000562626 N6AMT1Q9Y5N5 214 aa8.38□□□□□ -1.07
CLK3-208ENST00000562626 NF1P21359 2839 aa8.38□□□□□ -1.07
CLK3-208ENST00000562626 OTOGQ6ZRI0 2925 aa8.37□□□□□ -1.07
CLK3-208ENST00000562626 MPZL2O60487 215 aa8.37□□□□□ -1.07
CLK3-208ENST00000562626 IGHA1P01876 353 aa8.37□□□□□ -1.07
CLK3-208ENST00000562626 LCATP04180 440 aa8.37□□□□□ -1.07
CLK3-208ENST00000562626 H2BFMP0C1H6 154 aa8.37□□□□□ -1.07
CLK3-208ENST00000562626 NAT2P11245 290 aa8.37□□□□□ -1.07
CLK3-208ENST00000562626 MYF6P23409 242 aa8.37□□□□□ -1.07
CLK3-208ENST00000562626 PSMB10P40306 273 aa8.37□□□□□ -1.07
CLK3-208ENST00000562626 RAD52P43351 418 aa8.37□□□□□ -1.07
CLK3-208ENST00000562626 ALDH3B1P43353 468 aa8.37□□□□□ -1.07
CLK3-208ENST00000562626 SLC6A9P48067 706 aa8.37□□□□□ -1.07
CLK3-208ENST00000562626 TPTEP56180 551 aa8.37□□□□□ -1.07
CLK3-208ENST00000562626 ROM1Q03395 351 aa8.37□□□□□ -1.07
CLK3-208ENST00000562626 ZNF92Q03936 586 aa8.37□□□□□ -1.07
CLK3-208ENST00000562626 PSG7Q13046 419 aa8.37□□□□□ -1.07
CLK3-208ENST00000562626 TMED1Q13445 227 aa8.37□□□□□ -1.07
CLK3-208ENST00000562626 TNK1Q13470 666 aa8.37□□□□□ -1.07
CLK3-208ENST00000562626 GK2Q14410 553 aaPredicted RBP8.37□□□□□ -1.07
CLK3-208ENST00000562626 TAF13Q15543 124 aa8.37□□□□□ -1.07
CLK3-208ENST00000562626 TP53I3Q53FA7 332 aa8.37□□□□□ -1.07
CLK3-208ENST00000562626 THAP5Q7Z6K1 395 aa8.37□□□□□ -1.07
CLK3-208ENST00000562626 KRT77Q7Z794 578 aa8.37□□□□□ -1.07
CLK3-208ENST00000562626 LHFPL3Q86UP9 236 aa8.37□□□□□ -1.07
CLK3-208ENST00000562626 C8orf59Q8N0T1 100 aaPredicted RBP8.37□□□□□ -1.07
CLK3-208ENST00000562626 FBXL14Q8N1E6 418 aa8.37□□□□□ -1.07
CLK3-208ENST00000562626 ZNF283Q8N7M2 679 aa8.37□□□□□ -1.07
CLK3-208ENST00000562626 OR8B12Q8NGG6 310 aa8.37□□□□□ -1.07
CLK3-208ENST00000562626 SYNPRQ8TBG9 265 aa8.37□□□□□ -1.07
CLK3-208ENST00000562626 RFKQ969G6 155 aa8.37□□□□□ -1.07
CLK3-208ENST00000562626 APOBEC3DQ96AK3 386 aaPredicted RBP8.37□□□□□ -1.07
CLK3-208ENST00000562626 POM121Q96HA1 1249 aa8.37□□□□□ -1.07
CLK3-208ENST00000562626 SORCS2Q96PQ0 1159 aa8.37□□□□□ -1.07
CLK3-208ENST00000562626 DCLRE1CQ96SD1 692 aaKnown RBP8.37□□□□□ -1.07
CLK3-208ENST00000562626 BCL2L14Q9BZR8 327 aa8.37□□□□□ -1.07
CLK3-208ENST00000562626 VCXQ9H320 206 aa8.37□□□□□ -1.07
CLK3-208ENST00000562626 MRPS18AQ9NVS2 196 aaKnown RBP8.37□□□□□ -1.07
CLK3-208ENST00000562626 PAK1IP1Q9NWT1 392 aaPredicted RBP8.37□□□□□ -1.07
CLK3-208ENST00000562626 FAM206AQ9NX38 181 aa8.37□□□□□ -1.07
CLK3-208ENST00000562626 DUSP13Q9UII6 198 aa8.37□□□□□ -1.07
CLK3-208ENST00000562626 CMAHPQ9Y471 501 aa8.37□□□□□ -1.07
CLK3-208ENST00000562626 MED13LQ71F56 2210 aa8.37□□□□□ -1.07
CLK3-208ENST00000562626 DOCK11Q5JSL3 2073 aa8.36□□□□□ -1.07
CLK3-208ENST00000562626 CELSR1Q9NYQ6 3014 aa8.36□□□□□ -1.07
CLK3-208ENST00000562626 ZSCAN5BA6NJL1 495 aa8.36□□□□□ -1.07
CLK3-208ENST00000562626 B9A039 149 aa8.36□□□□□ -1.07
CLK3-208ENST00000562626 ZNF670-ZNF695F2Z2N8 137 aa8.36□□□□□ -1.07
CLK3-208ENST00000562626 NCR1O76036 304 aa8.36□□□□□ -1.07
CLK3-208ENST00000562626 IGHV3-13P01766 116 aa8.36□□□□□ -1.07
CLK3-208ENST00000562626 IGHV4-39P01824 125 aa8.36□□□□□ -1.07
CLK3-208ENST00000562626 OR2T7P0C7T2 308 aa8.36□□□□□ -1.07
CLK3-208ENST00000562626 LIMS3P0CW19 117 aa8.36□□□□□ -1.07
CLK3-208ENST00000562626 LIMS4P0CW20 117 aa8.36□□□□□ -1.07
CLK3-208ENST00000562626 HSD11B1P28845 292 aa8.36□□□□□ -1.07
CLK3-208ENST00000562626 OR12D2P58182 307 aa8.36□□□□□ -1.07
CLK3-208ENST00000562626 PSMA6P60900 246 aaKnown RBP8.36□□□□□ -1.07
CLK3-208ENST00000562626 GRB2P62993 217 aaKnown RBP8.36□□□□□ -1.07
CLK3-208ENST00000562626 POU4F2Q12837 409 aa8.36□□□□□ -1.07
CLK3-208ENST00000562626 DEFB113Q30KQ7 82 aa8.36□□□□□ -1.07
CLK3-208ENST00000562626 AGAP6Q5VW22 663 aa8.36□□□□□ -1.07
CLK3-208ENST00000562626 MBNL2Q5VZF2 373 aaKnown RBP8.36□□□□□ -1.07
CLK3-208ENST00000562626 OR2T2Q6IF00 324 aa8.36□□□□□ -1.07
CLK3-208ENST00000562626 DRAM2Q6UX65 266 aa8.36□□□□□ -1.07
CLK3-208ENST00000562626 Q6ZR03 302 aa8.36□□□□□ -1.07
CLK3-208ENST00000562626 FAM57BQ71RH2 274 aa8.36□□□□□ -1.07
CLK3-208ENST00000562626 ZNF679Q8IYX0 411 aa8.36□□□□□ -1.07
CLK3-208ENST00000562626 SETD9Q8NE22 299 aa8.36□□□□□ -1.07
CLK3-208ENST00000562626 OR2T27Q8NH04 317 aa8.36□□□□□ -1.07
CLK3-208ENST00000562626 GGHQ92820 318 aa8.36□□□□□ -1.07
CLK3-208ENST00000562626 SPTSSAQ969W0 71 aa8.36□□□□□ -1.07
CLK3-208ENST00000562626 SGK3Q96BR1 496 aa8.36□□□□□ -1.07
CLK3-208ENST00000562626 CMBLQ96DG6 245 aa8.36□□□□□ -1.07
CLK3-208ENST00000562626 PERPQ96FX8 193 aa8.36□□□□□ -1.07
CLK3-208ENST00000562626 LYZL4Q96KX0 146 aa8.36□□□□□ -1.07
CLK3-208ENST00000562626 Q96MT0 163 aa8.36□□□□□ -1.07
CLK3-208ENST00000562626 ANKRD60Q9BZ19 345 aa8.36□□□□□ -1.07
CLK3-208ENST00000562626 TPK1Q9H3S4 243 aa8.36□□□□□ -1.07
CLK3-208ENST00000562626 PPP1R3EQ9H7J1 279 aa8.36□□□□□ -1.07
CLK3-208ENST00000562626 ISG20L2Q9H9L3 353 aaKnown RBP8.36□□□□□ -1.07
CLK3-208ENST00000562626 G6PC2Q9NQR9 355 aa8.36□□□□□ -1.07
CLK3-208ENST00000562626 ACOXLQ9NUZ1 547 aa8.36□□□□□ -1.07
CLK3-208ENST00000562626 ZNF701Q9NV72 531 aaPredicted RBP8.36□□□□□ -1.07
CLK3-208ENST00000562626 UBAP1Q9NZ09 502 aa8.36□□□□□ -1.07
CLK3-208ENST00000562626 TAAR3PQ9P1P4 343 aa8.36□□□□□ -1.07
CLK3-208ENST00000562626 EIF3KQ9UBQ5 218 aaKnown RBP8.36□□□□□ -1.07
CLK3-208ENST00000562626 CLEC2DQ9UHP7 191 aa8.36□□□□□ -1.07
CLK3-208ENST00000562626 IKZF2Q9UKS7 526 aa8.36□□□□□ -1.07
CLK3-208ENST00000562626 SPEF1Q9Y4P9 236 aa8.36□□□□□ -1.07
CLK3-208ENST00000562626 HSPE1-MOB4S4R3N1 261 aa8.36□□□□□ -1.07
CLK3-208ENST00000562626 ARHGAP32A7KAX9 2087 aa8.35□□□□□ -1.07
CLK3-208ENST00000562626 TBX1O43435 398 aa8.35□□□□□ -1.07
CLK3-208ENST00000562626 FAM20BO75063 409 aa8.35□□□□□ -1.07
CLK3-208ENST00000562626 RPP14O95059 124 aaKnown RBP8.35□□□□□ -1.07
CLK3-208ENST00000562626 ANXA2P07355 339 aaKnown RBP8.35□□□□□ -1.07
CLK3-208ENST00000562626 DNASE1P24855 282 aa8.35□□□□□ -1.07
CLK3-208ENST00000562626 ATP6V1E1P36543 226 aa8.35□□□□□ -1.07
CLK3-208ENST00000562626 PTH2RP49190 550 aa8.35□□□□□ -1.07
CLK3-208ENST00000562626 ETV1P50549 477 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms