RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 PDLIM4P50479 330 aa14.26□□□□□ -0.13
CLK3-207ENST00000562389 ZNF81P51508 661 aa14.26□□□□□ -0.13
CLK3-207ENST00000562389 SNRPGP62308 76 aaKnown RBP14.26□□□□□ -0.13
CLK3-207ENST00000562389 POU4F2Q12837 409 aa14.26□□□□□ -0.13
CLK3-207ENST00000562389 MALLQ13021 153 aa14.26□□□□□ -0.13
CLK3-207ENST00000562389 HLXQ14774 488 aaPredicted RBP14.26□□□□□ -0.13
CLK3-207ENST00000562389 PCGF3Q3KNV8 242 aa14.26□□□□□ -0.13
CLK3-207ENST00000562389 SNAI3Q3KNW1 292 aa14.26□□□□□ -0.13
CLK3-207ENST00000562389 ZMAT1Q5H9K5 638 aa14.26□□□□□ -0.13
CLK3-207ENST00000562389 LPCAT4Q643R3 524 aa14.26□□□□□ -0.13
CLK3-207ENST00000562389 FAM168AQ92567 244 aa14.26□□□□□ -0.13
CLK3-207ENST00000562389 GTF3AQ92664 365 aaKnown RBP14.26□□□□□ -0.13
CLK3-207ENST00000562389 RFKQ969G6 155 aa14.26□□□□□ -0.13
CLK3-207ENST00000562389 RHNO1Q9BSD3 238 aa14.26□□□□□ -0.13
CLK3-207ENST00000562389 NIPAL2Q9H841 368 aa14.26□□□□□ -0.13
CLK3-207ENST00000562389 FAM118AQ9NWS6 357 aa14.26□□□□□ -0.13
CLK3-207ENST00000562389 DNAJC27Q9NZQ0 273 aa14.26□□□□□ -0.13
CLK3-207ENST00000562389 ITPR3Q14573 2671 aa14.25□□□□□ -0.13
CLK3-207ENST00000562389 LOC100130705A0A1B0GUX0 176 aa14.25□□□□□ -0.13
CLK3-207ENST00000562389 ZSCAN5BA6NJL1 495 aa14.25□□□□□ -0.13
CLK3-207ENST00000562389 NDUFS8O00217 210 aa14.25□□□□□ -0.13
CLK3-207ENST00000562389 PHYHO14832 338 aa14.25□□□□□ -0.13
CLK3-207ENST00000562389 NCR1O76036 304 aa14.25□□□□□ -0.13
CLK3-207ENST00000562389 SBK2P0C263 348 aa14.25□□□□□ -0.13
CLK3-207ENST00000562389 DAOP14920 347 aa14.25□□□□□ -0.13
CLK3-207ENST00000562389 FOSL1P15407 271 aa14.25□□□□□ -0.13
CLK3-207ENST00000562389 MAGEB1P43366 347 aa14.25□□□□□ -0.13
CLK3-207ENST00000562389 HCCSP53701 268 aa14.25□□□□□ -0.13
CLK3-207ENST00000562389 OCLNQ16625 522 aa14.25□□□□□ -0.13
CLK3-207ENST00000562389 LRRC36Q1X8D7 754 aa14.25□□□□□ -0.13
CLK3-207ENST00000562389 FAM209AQ5JX71 171 aa14.25□□□□□ -0.13
CLK3-207ENST00000562389 OGFRL1Q5TC84 451 aaPredicted RBP14.25□□□□□ -0.13
CLK3-207ENST00000562389 MEDAGQ5VYS4 303 aa14.25□□□□□ -0.13
CLK3-207ENST00000562389 KCTD18Q6PI47 426 aaPredicted RBP14.25□□□□□ -0.13
CLK3-207ENST00000562389 SLC35F2Q8IXU6 374 aa14.25□□□□□ -0.13
CLK3-207ENST00000562389 GALNT4Q8N4A0 578 aa14.25□□□□□ -0.13
CLK3-207ENST00000562389 C10orf105Q8TEF2 133 aa14.25□□□□□ -0.13
CLK3-207ENST00000562389 UBASH3BQ8TF42 649 aa14.25□□□□□ -0.13
CLK3-207ENST00000562389 ASB17Q8WXJ9 295 aa14.25□□□□□ -0.13
CLK3-207ENST00000562389 UBE2FQ969M7 185 aa14.25□□□□□ -0.13
CLK3-207ENST00000562389 COX4I2Q96KJ9 171 aa14.25□□□□□ -0.13
CLK3-207ENST00000562389 DIRC2Q96SL1 478 aa14.25□□□□□ -0.13
CLK3-207ENST00000562389 SP140LQ9H930 580 aa14.25□□□□□ -0.13
CLK3-207ENST00000562389 CLN6Q9NWW5 311 aa14.25□□□□□ -0.13
CLK3-207ENST00000562389 COPS3Q9UNS2 423 aa14.25□□□□□ -0.13
CLK3-207ENST00000562389 F8P00451 2351 aa14.25□□□□□ -0.13
CLK3-207ENST00000562389 IGHV4-30-2A0A087WSY4 118 aa14.24□□□□□ -0.13
CLK3-207ENST00000562389 LOC390937A0A1W2PQ73 354 aa14.24□□□□□ -0.13
CLK3-207ENST00000562389 IQCF6A8MYZ5 107 aa14.24□□□□□ -0.13
CLK3-207ENST00000562389 H7C1Q1 480 aa14.24□□□□□ -0.13
CLK3-207ENST00000562389 MPZL2O60487 215 aa14.24□□□□□ -0.13
CLK3-207ENST00000562389 IGHV1-46P01743 117 aa14.24□□□□□ -0.13
CLK3-207ENST00000562389 HPXP02790 462 aa14.24□□□□□ -0.13
CLK3-207ENST00000562389 SLC2A1P11166 492 aa14.24□□□□□ -0.13
CLK3-207ENST00000562389 SLC25A16P16260 332 aa14.24□□□□□ -0.13
CLK3-207ENST00000562389 SELEP16581 610 aa14.24□□□□□ -0.13
CLK3-207ENST00000562389 GABRB1P18505 474 aa14.24□□□□□ -0.13
CLK3-207ENST00000562389 ANOS1P23352 680 aa14.24□□□□□ -0.13
CLK3-207ENST00000562389 ZNF121P58317 390 aaPredicted RBP14.24□□□□□ -0.13
CLK3-207ENST00000562389 MRPS11P82912 194 aaKnown RBP14.24□□□□□ -0.13
CLK3-207ENST00000562389 GK2Q14410 553 aaPredicted RBP14.24□□□□□ -0.13
CLK3-207ENST00000562389 OR2T2Q6IF00 324 aa14.24□□□□□ -0.13
CLK3-207ENST00000562389 DEGS2Q6QHC5 323 aa14.24□□□□□ -0.13
CLK3-207ENST00000562389 LRRN1Q6UXK5 716 aa14.24□□□□□ -0.13
CLK3-207ENST00000562389 PRSS45Q7RTY3 260 aa14.24□□□□□ -0.13
CLK3-207ENST00000562389 KRT77Q7Z794 578 aa14.24□□□□□ -0.13
CLK3-207ENST00000562389 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.24□□□□□ -0.13
CLK3-207ENST00000562389 ZNF786Q8N393 782 aa14.24□□□□□ -0.13
CLK3-207ENST00000562389 ZNF555Q8NEP9 628 aa14.24□□□□□ -0.13
CLK3-207ENST00000562389 OR51G2Q8NGK0 314 aa14.24□□□□□ -0.13
CLK3-207ENST00000562389 C18orf12Q96KH6 178 aa14.24□□□□□ -0.13
CLK3-207ENST00000562389 OPA3Q9H6K4 179 aa14.24□□□□□ -0.13
CLK3-207ENST00000562389 ZDHHC8Q9ULC8 765 aa14.24□□□□□ -0.13
CLK3-207ENST00000562389 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.24□□□□□ -0.13
CLK3-207ENST00000562389 LRP12Q9Y561 859 aa14.24□□□□□ -0.13
CLK3-207ENST00000562389 C5orf63A6NC05 138 aa14.23□□□□□ -0.13
CLK3-207ENST00000562389 XRCC2O43543 280 aa14.23□□□□□ -0.13
CLK3-207ENST00000562389 SPRY3O43610 288 aa14.23□□□□□ -0.13
CLK3-207ENST00000562389 ENTPD6O75354 484 aa14.23□□□□□ -0.13
CLK3-207ENST00000562389 ANXA2P07355 339 aaKnown RBP14.23□□□□□ -0.13
CLK3-207ENST00000562389 CD55P08174 381 aa14.23□□□□□ -0.13
CLK3-207ENST00000562389 PSMA6P60900 246 aaKnown RBP14.23□□□□□ -0.13
CLK3-207ENST00000562389 ROM1Q03395 351 aa14.23□□□□□ -0.13
CLK3-207ENST00000562389 ZNF92Q03936 586 aa14.23□□□□□ -0.13
CLK3-207ENST00000562389 CDK5R2Q13319 367 aa14.23□□□□□ -0.13
CLK3-207ENST00000562389 GLYATL3Q5SZD4 288 aa14.23□□□□□ -0.13
CLK3-207ENST00000562389 Q6ZR03 302 aa14.23□□□□□ -0.13
CLK3-207ENST00000562389 USP51Q70EK9 711 aa14.23□□□□□ -0.13
CLK3-207ENST00000562389 PGAP1Q75T13 922 aa14.23□□□□□ -0.13
CLK3-207ENST00000562389 MRPL21Q7Z2W9 205 aaKnown RBP14.23□□□□□ -0.13
CLK3-207ENST00000562389 ENTHD1Q8IYW4 607 aa14.23□□□□□ -0.13
CLK3-207ENST00000562389 ZNF679Q8IYX0 411 aa14.23□□□□□ -0.13
CLK3-207ENST00000562389 CIARTQ8N365 385 aaPredicted RBP14.23□□□□□ -0.13
CLK3-207ENST00000562389 OR8G5Q8NG78 346 aa14.23□□□□□ -0.13
CLK3-207ENST00000562389 RDH5Q92781 318 aa14.23□□□□□ -0.13
CLK3-207ENST00000562389 SPSB4Q96A44 273 aa14.23□□□□□ -0.13
CLK3-207ENST00000562389 OR8B4Q96RC9 309 aa14.23□□□□□ -0.13
CLK3-207ENST00000562389 PIMREGQ9BSJ6 248 aa14.23□□□□□ -0.13
CLK3-207ENST00000562389 MROQ9BYG7 248 aa14.23□□□□□ -0.13
CLK3-207ENST00000562389 REG4Q9BYZ8 158 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms